Triplophysa rosa: 130556116
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Entry
130556116 CDS
T09216
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130556116 (aff3)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130556116 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
130556116
NCBI-ProteinID:
XP_057192806
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Position
LG6:16067603..16086223
Genome browser
AA seq
1222 aa
AA seq
DB search
MPTVYGSKGKLSSICFMLQHASQDMTQSWPYQQPPEEGGTQHFLYSHSKEGKQSNSRHRH
VRDGVSLRVPSRPHVAPHKSMLADDLKLSSDEDNRDEGSEQTTSWADNDRLSSRQQRTHT
HGGRVRHSSSGSSGSDSSSEWESGSHRSRSPSPRTRAQYGSPTRQQNLNCSTESPPSTQW
QLDRWLEKVPKRLTDHDPGGGRRRSAKSDCGRGPSPGKYWSRDSESRQDYSPCDSPVPSP
QFHYSPRNSPHASPEYSPCPSPGISLVPSPVPSVCPSPGESLRESRSPSPLPPHRPRSPS
PCFTSTAIPTQDCLTYPQVTQQESPSHTARPTVASNPSHRPKVRPWVPPDHNTDQRKESR
PKDSRSKDTRPGPPYQHHSKHSLVENSRKNLQHKPEAKGSKSTIKQKFNPTSNPKYQSKL
NSRPSLSPKQQGKHSSTTNHSIHNHRTSEPTGVSINRSTSKSGHSSHFNTSKSSDRGPTL
KPKDSSRNRVNSQSSHSSNSSSKSKHFPDTKQSSSKPSSQTSSSPRPKVKLGDAPVPRSG
HPQKHSNPREREQEVDSRGKAQGVPLVPTGKEPRQRRLAEEQLTRRRWVQSSDEEEDEEV
RRTEEIERKRKRTREHETEWQAVQPKQRPHTNSQHHLSVESNSLNPEEQRRKKRRQSNED
FSSRPHVIDSSPSPPLSPPSPTPVIQPKPPSSSSSSSSSSSSSSSSSSESESESSPPRNV
TKVPADSTSGQKRHNKQNSGAGGQSNKSSLSTPEADKRGRGRHKLYTLVPFGRSENSPTI
SHRGLRNLVVRIDLSLLSRVPDTNEVTERHSSSSLSSGKIKEKTSMRHLHHSEQLPGDGR
CKRKAENGEVQRVNKRTPAHTDKRSASENRDTGETCTDNKHNGCQEDYFYAKRPLSPLSP
PSDPVERSKPSVKAQHTEKYHTPPGKDPTAQKTQVPKMQPKVEMECVGLSGQPQPFSGSR
VPPPNLPPHYRGTVPISDVSHHAEYYMHEAKRLKHRADAMVDKLGKAVNYVDAALSFMEC
GKAMEEGPLESKSPYAMYAETVELIRYAMRLKSHAGPGASQEDKQLAVLCFRCLALLYWQ
MFRLKKDHALKYSKVLLDFFKSSPKAPQKTPPWNDSGKGSVPPASICSVNIMGPHTGSSP
SNVISIPHRIHQMAANHLNITNSVLYSYEYWEVADTLAKENKEFFNYLNTLTGPLTLHSS
MAHIVQYTRQGLQWIRISANLS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgtttatggaagtaaggggaaactttctagtatttgtttcatgcttcagcac
gcgtcccaggatatgacccagtcctggccttaccagcagcccccagaggaagggggtact
caacatttcctgtactcacactcaaaggaaggaaagcagtccaattcccgtcacagacat
gtgagggatggtgtctctttgagggtcccctcacgtccacacgtggcccctcacaaatcc
atgctcgctgatgacttgaaactcagcagtgacgaggataacagggatgagggaagtgag
caaacaacttcttgggcagataatgaccgcttgtcaagccggcagcagcgcacacacaca
catggcggacgggtgagacattctagctcagggtcgtcgggatccgactcctccagcgag
tgggaaagcggtagccatcgatcacgcagcccgagcccaagaacgcgtgcccaatacggg
tcaccgacccggcagcaaaatctaaactgtagcacagagagtccgccgtctacacagtgg
cagctggacaggtggcttgagaaagtccccaagagactgactgaccacgacccaggagga
ggacgacgccggagtgcaaaatctgactgtgggcgaggaccatcaccaggaaaatactgg
agcagagactctgagtcaagacaggattacagtccatgtgacagtccggtccctagtcca
caatttcactatagccccagaaacagtcctcatgccagccctgaatatagtccttgcccc
agtccaggaattagcctcgtgccaagtccagtgccaagtgtgtgcccaagtccaggagag
agcctcagagagagtcgaagtcccagtcctttaccaccacaccgtcccagaagccccagt
ccatgtttcacatccaccgcaatacccacccaagattgtttaacatatcctcaggttact
cagcaggaaagtccaagtcatactgcacgaccaactgttgcctccaatccatcgcatcgt
cctaaagtcaggccatgggtgcctccggaccataacactgaccagagaaaagagtctaga
cctaaagactctagatccaaagacactagacctggtcctccttaccaacatcattccaaa
cacagcttggtggaaaactcacgcaaaaaccttcaacacaagcctgaagccaaaggttct
aaatccacaatcaagcaaaaatttaacccaacttctaacccaaagtatcaatccaagctg
aactctagaccaagtcttagcccgaaacaacaaggtaagcactcatctacaaccaaccat
agtattcataatcacagaaccagtgagcctacaggagtatcaatcaaccggtcaacttcc
aaatcggggcattcatcccattttaatacttctaaaagctctgaccgaggtcccacctta
aaacccaaagactcgtccagaaaccgcgtaaacagtcaatccagccacagctcgaactct
agctccaagtctaaacatttccctgataccaagcaatccagttctaaaccaagctcccaa
acaagttccagcccaaggcccaaggttaaacttggtgatgccccagtgcccagatctggg
cacccacaaaaacattcaaatcccagagaaagagaacaggaggtggacagccgaggtaaa
gcccagggagtacccctggtgccgaccggcaaggagccgagacaaaggagactggcagag
gagcagctaacaaggcgccgctgggttcaaagttctgacgaagaggaagacgaggaggtc
aggagaacagaggaaatagagaggaaaaggaaacggacgagggagcatgaaactgaatgg
caagcagtgcagcccaagcaaagacctcataccaacagccagcatcacctttcagtggaa
tccaatagcctaaaccctgaggagcagaggaggaagaaaagaaggcaaagcaacgaggac
ttttcttcacgtccgcatgtaatagactctagcccttcccctccactgtctccaccctcc
cctactcctgtcatccagcccaagcctccatcatcttcatcttcctcatcctcatcttcc
tcgtcgtcttcatcgtcttcctctgagtcagaatcagagtccagtcctccacgaaatgtt
accaaagttcctgcagattcaacatcaggccaaaagaggcacaacaaacagaactcaggt
gcaggtggtcaatccaacaagtcaagcttaagcaccccagaagcagataaaaggggtcgg
ggcaggcacaaactctacacacttgttccttttggccgttctgaaaattctccaaccatc
tcacatcgaggcctgaggaacctagtagtgaggatagacctctcgctcctgtccagagtc
ccagatacaaatgaggttacagagagacattcgtcttcatctttgtcatcaggaaagata
aaagaaaagacatcaatgagacatcttcaccactcagagcaactgcctggtgatggcaga
tgtaaaagaaaagctgagaatggagaagttcagagggtcaataagagaactccagctcat
acagacaagcgttctgcgtcagaaaatagagatactggagaaacttgcactgacaacaaa
cacaatggatgccaggaagattacttttacgcaaagaggcctttgtccccattgtctcct
ccatctgacccagtggagcggtcgaagccctcggtgaaagcacagcatacagaaaagtac
cacacacctccaggaaaagatccaacagcccagaaaacgcaagtcccaaagatgcagccc
aaggtagagatggagtgtgtcgggctttcaggacagccacagccattctctggatcccgc
gttcctcccccaaaccttcctcctcactacagaggaactgtacctatcagtgatgtttct
catcatgccgaatactacatgcatgaagccaagaggttgaaacatcgagcagatgcaatg
gtggataagttaggaaaagctgtgaattatgtggatgctgctttgtcatttatggagtgt
ggtaaagccatggaagagggaccactggaatccaagtctccgtatgctatgtatgctgaa
actgtggagctcatcagatacgcaatgagactcaagagtcatgcaggtcctggagccagt
caggaggacaaacagctagctgtactgtgtttccgctgtcttgctctcctttattggcaa
atgtttcgactcaagaaggaccacgctcttaaatactctaaagtcctgctagatttcttt
aagagttctccaaaagcacctcaaaaaacccctccctggaacgattctggaaagggatct
gtacctcctgcctctatttgctctgtcaatataatgggacctcatacaggcagctcacca
agcaacgttatcagcattccccatcgtatccaccagatggcagcaaaccacctcaatatt
accaacagtgtgctgtacagttatgagtactgggaggtggctgataccctagccaaggaa
aataaagaattttttaactatttgaacacactgactggacctttgactctgcacagcagc
atggcccatatcgtccagtataccaggcaggggctgcagtggatccggatcagtgctaat
ctatcatag
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integrated database retrieval system
