Triplophysa rosa: 130556154
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Entry
130556154 CDS
T09216
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130556154 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130556154 (u2af1)
Spliceosome [BR:
tros03041
]
Complex A
U2 snRNP components
U2 related factors
130556154 (u2af1)
Complex B
130556154 (u2af1)
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GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
130556154
NCBI-ProteinID:
XP_057192881
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Position
LG6:complement(24174937..24181759)
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AA seq
229 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGINAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE
DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL
RRELYGRRRKRHRSRSRSRERRSRSRERNRGGRDRERRRSRDRERSGRF
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtacctggcgtcgatttttggtaccgaaaaagacaaggttaactgctcgttc
tactttaaaattggagcatgtcgccacggagaccggtgttccagactccacaacaagccc
acattcagccagaccattgcgctcctgaacatctaccgaaacccacaaaacacagcacag
tctgcagatggaataaatgctgtcagtgatgttgagatgcaagaacattacgatgagttc
tttgaggaggtgtttactgaaatggaagagaagtatggagaggttgaggagatgaatgtt
tgtgataatttaggagatcacttggtgggcaatgtctatgtgaagttccggcgtgaagaa
gatgctgagaaggcagtgattgatttgaataaccgctggtttaatggccagcccatccat
gctgagctctctcctgtcactgacttcagagaggcttgttgtcgacagtatgagatggga
gagtgcactcgaggtggcttctgcaatttcatgcatctgaagccaatttcaagggagctc
aggagagagctgtatggccgcagaagaaagaggcatcgctctcgttcacgttctcgtgag
aggcgctctcgttctcgcgaacgcaatagaggtggaagagaccgggagaggcggaggtca
agagatagggaacgctctggacgattttaa
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