Triplophysa rosa: 130556191
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Entry
130556191 CDS
T09216
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130556191
Membrane trafficking [BR:
tros04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130556191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_1
TPR_NPHP3
ARM_TT21_4th
SH3_1
SH3_9
IL11
TRAUB
Motif
Other DBs
NCBI-GeneID:
130556191
NCBI-ProteinID:
XP_057192961
LinkDB
All DBs
Position
LG1:30940615..30955548
Genome browser
AA seq
1321 aa
AA seq
DB search
MSTATRKNSYNTGNGVEYDPDKNRSIRRELSIEYSRNELDIIMETSKDFKTSRGSVKGNS
AASEDNIPTVLALQLAMVDGPDRLPADKGTQEVLCRKLCVLEADLTEVTNLISELSAHLV
SVNSGERTIYITFNTFEEIWKFCTYHRMGFLGQCMENLLMDQEFWLISLHQDSGIEISIK
EEELHRMYKGFLMQEGSFFGCCTANQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWTVLS
LADGSRGTKPKPALEPVIPFHEWFLKSCPEGVLVGGGKGTSDLPFPIAIGVCETTEEYDA
DVPDELSFQAGENIIILGLLVACYEWFMGKLEKTGDIGLVKTSMVKVTDSVCESSEIFLK
DEVRQIVALDEEKIKEETITLLKKSCQCDVGTNYKLDLTKEIPGTVQNKSHQTETNNLKH
KVCHILRKLNENPRNEVKSNSSKHQKQKEAIDTEASKGTLRFSVCSEQENTSPDGHHALL
SFLNSHDHHPEFLLLYSAYPEFLISHFQGHSDEEDIVAYLGEARELSRKKRLSWAQSRIC
FLLGQLCAGRSKFSQARVYFEEALSVPRDYFKDKFLLSAIYSNLAFIYLTQKNHEKFVSL
SERFSAVLMAVPNCLLGCEEPEILKYVLKKAILAKNKSVEARVCFLLAKLHLKLNDGMSA
IPFIERLQILADEVSGACDATWSHASLVLARLYSDQCLPHLAESCARRSSLQVGATVSHC
LCGISLLLENASELSRVTIPTQVAPYLTHAASLVPSNEEPALTYIHALCLSWLFHKHSMP
DRAVCYMRTFLDHSSASGVTQSDVTDALMWLAWLYICNQQPSRALEVLDGVLSSLPDHCT
TQLEGMVYNIRAIAYRRSTDIRQASESYRAAVEICEEFEDRHNWAIVLANFGFMCLQVKA
KRLAEEYLTRSVELFSELEDEGHELSFIAVLLELGRLLISQGSYESGKIYYEWALLIAVH
IDEPESQLGAIRQLCHLYEVVCPDEAQCIIYNEHQLNLVQLIGDKSLEGDILEKISQLYL
NLGTERANRAALDYTKRSLAIFIDLGRKTKEAHAWLQAGKIYHILKQKELVDLYVQVAQD
VALSTGDTLFTLELLEAAGDVFFNSSEDREKAICFYRDRALPIAVKTSSVLSQLRLCNKL
SELLLQLRQFSEAIEFAQTALDISVSLTDHLNERVAFHRLATLYHCVDQFEMAEHHFLKA
LSMCPSPLQYDEEALYYVRVYQTLGDIIFYDLKDPFDAAGYYHLALAAAMDLGTKRSQLK
LCTRLATVYHNFLMDRELSLYFYQRARVLANELHVRRVNLTPDQNFRTTAQYKNTISEVT
R
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgctactagaaaaaactcatacaacaccggtaacggcgtggagtacgatccg
gataaaaatcgatcgatacgtagagagctttcgattgaatactcacgaaatgaattggat
attattatggaaacttcaaaagattttaagacctcaaggggaagtgtcaaaggaaactcg
gcagcttctgaggacaatatacctacagtgttggctttgcagctggctatggtggatggg
ccagatcgacttcctgctgacaagggcacacaggaagtgctgtgcaggaaactctgtgtg
ctggaagcagacctcacagaggtcacgaacctaatctctgaactgtcagcacatttggta
tctgttaacagtggggaaaggactatatatatcacttttaacacctttgaagaaatatgg
aagttttgcacataccacagaatgggcttcttaggtcagtgtatggaaaatcttctcatg
gaccaggagttctggttaatctccctccatcaggattctggaatagaaatctcaattaaa
gaagaggaattacatcgtatgtataaaggctttctaatgcaagaagggtccttttttggc
tgctgcactgccaatcagatgtttgatagctccacatcaggtagtgacctgtacctggag
aagggagatattgccctgtttgaacctccattcttaggatcaggatggacagtgctatcc
ctggctgatggatctagaggaaccaaaccaaaaccagctctggagccagtcattcccttt
catgaatggtttttaaagtcctgtccagagggtgtgttagtgggtggaggaaaggggact
agtgaccttccatttccaatagccataggagtctgtgagaccacagaggagtatgatgct
gatgtgccagatgaactgagcttccaggctggtgaaaacatcattatcctgggcctgctg
gtggcctgttatgagtggtttatggggaaactggagaaaactggtgatattggacttgtc
aagaccagtatggtcaaagtaactgattctgtttgtgaatcatctgaaattttcttgaaa
gatgaggtccgacaaattgttgccttggatgaggagaaaattaaagaagagaccattacc
ttattgaagaaatcttgccaatgtgatgtcggcacaaactacaaactggatctgacaaag
gaaattccaggaacagttcaaaacaagagtcatcaaacagaaacaaacaatctaaaacat
aaagtctgccacattttgaggaagttaaatgagaacccaagaaatgaggttaaatcaaac
agcagcaagcaccaaaaacaaaaagaagccattgatactgaggcatccaagggaacccta
cgtttttctgtctgctcagagcaggagaacacaagtccggatggacatcatgctctcctc
tccttcttgaacagccatgatcaccaccctgaattccttctcctttacagcgcataccca
gaattcctcatctcacatttccagggtcactctgatgaagaggacatagtggcatattta
ggagaagccagagaattatcacgaaagaaacgcctctcgtgggcacagagtcgaatctgt
ttccttcttgggcagctctgtgcgggaaggtcaaagttctcacaggcccgggtttacttc
gaggaagctttgagtgtacccagggattatttcaaagacaagtttctgctgtctgccatt
tactccaacctggcatttatctacctaacccagaaaaaccatgagaaatttgtctctttg
tcggagcgcttttctgctgtgttaatggcagttcccaattgtctgcttggttgtgaggag
cctgagatattaaagtatgtattaaagaaggccatcttggccaagaacaaatctgtggaa
gccagagtctgctttcttttggcaaaactccacctgaagcttaacgatggcatgagcgca
atcccgttcattgaaagacttcagattcttgctgatgaggtttcaggggcttgtgatgca
acatggagccatgcttccctggtgttagcaagactctacagcgaccagtgtctgccacat
ttggctgaaagctgtgcacggcgatcatcactacaggtaggagccacagtgtcacactgt
ctttgcggcatctcactattacttgaaaatgcatcggagctgtccagggtgaccatccca
actcaagtggctccttatctgacccatgctgcctctttagtgccctccaacgaggagcct
gcgctcacttacatccatgccctgtgtttgtcctggctcttccacaaacacagcatgccg
gacagagctgtttgttacatgcgcaccttcctcgaccacagcagcgcatccggcgtcaca
cagtcagacgttaccgatgctctcatgtggttggcatggctgtacatctgcaaccagcaa
cccagcagagctctggaggttctggatggcgtgctgtcatctctccccgatcactgcaca
actcagttggagggcatggtgtacaatatacgtgccatcgcgtacagacgttccacagac
atccggcaagcttctgagagttaccgggctgcagtcgagatttgcgaggagtttgaagat
agacataactgggccatagtgctggccaacttcgggttcatgtgtttgcaagtcaaggcc
aagaggttggcggaggaatacctcacccgctcagtggagctgttctcagagcttgaggac
gaaggacatgaattaagttttattgctgtgcttcttgagttagggagactcttgatttct
cagggaagctatgagagtgggaagatctattatgagtgggccttgttgattgctgtccac
attgatgaaccggagagtcagctgggagccatacgtcagctgtgtcacctgtatgaagtg
gtgtgtccagatgaagctcagtgtatcatctacaatgaacaccaactgaaccttgtacag
ctgattggagacaagagtttagagggagatatactggagaagatcagccagctatacctg
aacctgggcacagagagagcaaacagggctgctttagattataccaaacggagcctggcc
atttttattgacttgggcagaaagacgaaggaggctcatgcctggctacaggcaggaaaa
atttaccacatcctcaaacaaaaggagttagtggatctttacgtgcaggttgcccaggac
gtggctctgagcacaggagacacgctattcaccctggagctgttagaagcagcaggagat
gtgttcttcaacagctcagaagacagagagaaagccatctgcttttacagggaccgagcc
cttcccattgcggtgaagacgagcagcgtgctctctcagcttaggctgtgtaacaagctt
tcagaactcctgctgcagttgaggcagttttcagaggccattgagtttgctcaaactgcg
ttagacataagcgtgagtctgactgaccatttaaatgagcgcgtggctttccatcggctc
gccacgttgtatcattgtgtggatcagtttgaaatggcagagcaccactttctaaaagcc
ctgtccatgtgtccctcacccctgcagtatgatgaggaagccttgtattatgtcagggtt
taccaaacactgggagacatcatcttctatgatctaaaggacccatttgacgcggctggc
tattatcatcttgcactggctgctgctatggacctgggcaccaagaggtctcagttaaag
ctgtgtactcggttggctactgtctaccacaactttctcatggaccgtgaactctcactg
tatttctaccaacgagcacgtgttctcgcgaacgagctccacgttcgtcgcgtcaacttg
actccagaccagaacttcaggaccacagcccagtacaaaaacactatatctgaggtaaca
cgatag
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