Triplophysa rosa: 130556256
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Entry
130556256 CDS
T09216
Symbol
scn8ab
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
tros
Triplophysa rosa
Pathway
tros04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130556256 (scn8ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130556256 (scn8ab)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130556256 (scn8ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
FraC
GPHH
IQ
SieB
Motif
Other DBs
NCBI-GeneID:
130556256
NCBI-ProteinID:
XP_057193031
LinkDB
All DBs
Position
LG7:complement(13807061..13863847)
Genome browser
AA seq
1968 aa
AA seq
DB search
MAAQLLAPPGPHSFKRFTPESLANIEKRIAEEKKKKPVKPRSDSSHRDDDDDNKPKHNTD
LEAGKSVPFIYGDVPSNMLAVPLEDLDPFYMNTKTFIVLNKGKTIFRFSATPSLYIISPF
NLFRRIAIKILIHSLFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLTKIV
ARGFCIDGFTFLRDPWNWLDFMVISMAYITEFVNLGNVSALRTFRVLRALKTVAVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINQTETFLANGSR
GFDFNEYIMNETNFYFLPGMLDALLCGNSSDSGRCPEGYMCMKAGRNPNYGYTSFDSFGW
AFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATMEEAEQKEAEFKAMLEQLKKQQEDAQANAMATSAGTVSEDAVEDDGGEHLSRSSSEV
SKLSSKSAKERRNRKKKWRKEQEEKGDTEKVVKSESDDGSKRSRFRFRDNRLGRKASIIN
QSLLSIPGSPFMSRRSSIFSFKGSENEFADDEHSTVEESEDRRGSLFVPYRRSSYSGYSQ
GSSRINPLAPHPGCKRNSTVDCNGVVSLIGPGTGRLLPEVKIDKAASDDSTTEVEVKRKH
SGSLMVSVDQLNTSFSRKERANSAMTVVTNTLVEELEDSQRKCPPCWYKFANTFLIWECF
PLWIKIKEIVNLIVMDPFVDLAITICIVLNTVFMAMEHYPMTPHFADVLSVGNLVFTGIF
TAEMFAKLVAMDPYYYFQEGWNIFDGFIVSLSLVELGLADVEGLSVLRSFRLLRVFKLAK
SWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAEKCELPR
WHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALL
LSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWFKVHMRLLVAHILKKKPLEDEDKPLD
DMFDKKLNIIGNHTGVDIKCDLNYPKNGNGTTSGIGSSVGKYMIDEEPMSFIHNPNLTVR
VPIAVGESDFENLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDEEEMAVVEVVEEYL
DPEACWTDACVARYKCCDVPITEGWGKYWWFLRKTCYLIVEHNWFETLIIFMILLSSGAL
AFEDVYIEQRKTIQIILGYADSVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVS
IVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCL
IFWLIFSIMGVNLFAGKYYYCFNQTLEEYFNVEIVNNKTQCYALINSNHSEVRWKNVKIN
FDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEDQPIYEDNIYMYIYFVIFIIFGSFFT
LNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGMV
FDFVTQQAFDISIMILICLNMVTMMVETDDQSEETENILYWVNFIFIVSFTGEFVLKLFA
LRHYYFTNGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAK
GIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKREVGIDDMYNFETFGNSM
ICLFMITTSAGWDGLLAPILNYPPDCDPNKENPGTTVKGDCGNPSVGIFFFVMYIIVSFL
IVVNMYIAIILENFSVATEESADPLCEDDFESFYEIWEKFDPDASQFITFAKLPDFADTL
EHPLRVPKPNIIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFVA
ANPSKVSYEPITTTLRRKQEEVSAMVIQRAYRAHLAHRGFICKRRPANNKLENGGANQEK
KEGTPSTASLPSYDSVTKPEKEKQDDNNEGKGRKEKGRNQKDVRESKC
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcagctgctcgcacctccaggcccccacagcttcaagaggttcacccctgag
tcgttggccaacatcgagaagcgaatcgccgaggagaaaaagaagaagcctgttaagccc
agatctgacagcagtcaccgtgatgacgatgatgacaacaaacccaagcataacactgac
ctggaagcggggaagagcgtcccctttatttatggggatgtcccttcgaacatgttggcc
gtgcccctggaggacttggaccccttctatatgaacacgaaaacctttatagtgcttaac
aaggggaaaacgatcttccgtttcagtgccacgccctcattatatatcattagccctttt
aacctatttaggcgaatagcaattaaaattttgatacactcacttttcagcatgatcatc
atgtgtacaattttgacaaattgtgtgttcatgacattcagcaatcctccagaatggtcc
aaacaagtagaatacaccttcacagggatctacacattcgagtcactcacaaagattgtg
gctcgaggtttctgtatagacggcttcaccttcctcagagacccctggaactggctggat
ttcatggtcatttctatggcgtatattacagagtttgtaaacctaggcaatgtgtcagct
ctgcgcacattcagggtgctgagggctttgaaaactgttgctgtgatcccagggctaaaa
accattgtgggcgctctgatccagtcagtgaagaagctgtcagatgtgatgattctgaca
gtgttctgtctgagtgtgtttgcactcatcggcctgcagctgtttatgggtaatcttcgg
cataagtgcgtcatctggccaatcaaccaaacagaaaccttcctggctaatggcagcagg
ggctttgacttcaatgaatacatcatgaatgaaacaaacttctacttcctgcctggcatg
ttggatgctctgctatgtggaaacagctcagactcagggcgctgtccggagggctacatg
tgcatgaaagctggacgcaacccaaactatggctacactagctttgactcctttggctgg
gcttttcttgccctcttccgactcatgacacaagacttctgggaaaatttgtaccaactg
actctacgagctgcagggaaaacgtacatgatcttttttgtgctggtgatcttcgtgggt
tcattctaccttgtgaatctgatcctggctgtggtggccatggcttatgaggagcagaac
caggccaccatggaggaggctgaacagaaggaggcggagtttaaagccatgctggagcaa
ctaaaaaaacagcaagaggatgcacaagcaaatgctatggcgacctcagcaggtacagta
tctgaggatgcagtagaggatgacgggggagagcatctgtcccgcagttcttctgaggtg
tctaagctgagctccaaaagtgccaaggagcgaaggaacagaaagaaaaagtggcggaaa
gaacaggaagaaaaaggtgacaccgagaaggtagtgaagtcagaatccgatgacggcagc
aagaggagccgctttcgattccgagacaacaggcttgggcggaaggcctctattattaac
cagtccttgttgagtatccctggctcgcccttcatgtcccgtcgcagcagtatattcagc
ttcaagggctcagagaacgaattcgcagacgatgagcacagcacggtcgaggagagcgaa
gaccggcgcggatcccttttcgtcccctacagacgcagcagctatagcggctacagccaa
ggttcctcacgcatcaacccgctggcgccccaccctggctgcaagagaaacagcacggtc
gattgcaacggtgttgtgtcactgatcgggcctgggactggccgcctactgcctgaggtg
aaaatagataaggcagcttccgatgacagtaccacagaggtggaggtgaagagaaaacac
tcaggttctctaatggtatcagtagaccagctcaatacctcctttagccggaaagagcga
gccaacagcgcgatgacagttgtcaccaacacgctggtagaagaactggaggattctcag
agaaaatgtccaccctgttggtataagtttgccaatacgttcttgatatgggagtgtttc
ccgctctggataaaaataaaggaaatagtgaacttgatagtgatggatccatttgtagat
ctggccatcacaatatgtattgtgctcaacacagtcttcatggccatggagcattacccc
atgacaccgcactttgcagatgtgctttctgtgggaaacctggtgttcacaggtatcttc
acagctgagatgtttgcaaagctggtagccatggatccatactactacttccaagagggc
tggaatatctttgatggcttcatcgtgagcttgagtttggtggagctggggctggctgat
gtagaggggctgtctgtgctcagatccttcagattgttgagagtgttcaagttggctaaa
tcatggcccactctgaacatgctgataaagatcattggtaactcagtgggagctttggga
aacctgaccctggtgctggccatcatcgtcttcatcttcgctgtggtgggcatgcagctg
tttgggaagagctataaagactgtgtgtgtaagatcgcagaaaagtgtgagctgcctcgc
tggcacatgaatgacttctttcactctttcctcatcgtgttccgtgtgctgtgcggagag
tggatcgagaccatgtgggactgcatggaggtggcagggcaaacaatgtgtctcacagtc
ttcatgatggttatggtcattggaaacttggtggtgctgaacttgttcttggccttgctg
ctcagctccttcagtgctgataatctggcagccacagatgacgacggcgagatgaacaac
ctgcagatctcagtgattcgcatcaagaaaggcatcgcctggttcaaagttcatatgagg
cttctggtggcccacatcctgaagaagaaacctctggaggacgaagacaaacctctcgac
gacatgtttgacaagaaactcaacattataggtaaccacactggcgtggacatcaaatgt
gatctcaactaccccaaaaacggtaacggtaccacaagtggcatcggcagcagcgtcgga
aagtacatgatcgacgaggaacccatgtccttcatacacaaccccaacctaacggtacgg
gtacctatcgctgtgggagagtcagactttgagaacctcaacacggaggacttcagcagc
gagtcggatgtggaaaatagcaaagatctggatgacaccagctcttccgagggaagtact
atagatataaagccggatgaggaggaaatggccgtagtagaggtggtggaggagtacttg
gacccagaggcctgctggaccgacgcttgcgtggcacgttacaagtgttgtgatgtgccc
atcactgagggctgggggaagtactggtggtttctaaggaaaacctgctacctcattgtt
gaacacaactggtttgagacactcatcatttttatgattctgctcagctctggggctctg
gcatttgaggatgtgtacattgaacagaggaaaactatccagatcattctaggatatgca
gacagtgtcttcacatacatctttattttggagatgttactgaaatgggtggcctatggg
tttgtcaaatacttcaccaatgcatggtgttggctggacttcttcattgttgacgtgtct
atagtcagccttatagctaatgcgctgggctactcagacttgggccccataaagtccctg
aggactttgagggctctcaggcccctgagagctttgtcccggtttgagggcatgagggtt
gttgtgaacgctctggtgggtgccattccctccattatgaacgtgctgttggtgtgttta
atcttctggctgatcttcagcatcatgggtgtcaatctgtttgctgggaagtactactat
tgcttcaatcagaccttagaggaatactttaatgttgagatcgtcaacaacaaaacacaa
tgctatgcgctcatcaactcaaaccactcagaagtccgttggaagaacgtgaagatcaat
ttcgacaatgtgggtgctggttacctggcgctcctgcaagtggcaactttcaaagggtgg
atggacatcatgtatgctgccgtggattccagaaaagttgaggaccagccaatctatgag
gacaacatctacatgtatatatattttgtgatcttcataatcttcggctccttcttcact
ctgaatctctttattggtgtcatcatcgacaactttaaccaacagaagaaaaagtttgga
ggtcaggatatcttcatgacagaagagcagaaaaagtactacaacgctatgaagaaacta
ggttcgaagaagcctcagaagcccatccccagaccgctgaacaaaatccaggggatggta
tttgactttgtcacccagcaggcctttgatatctctattatgatactcatctgtctgaac
atggtaactatgatggtggaaacagatgatcagtcggaggagacagagaacatcctgtac
tgggtaaacttcatattcatcgtgtctttcaccggcgagtttgtcctgaagctgtttgct
ctgcgacactactatttcaccaacggctggaacatctttgactgcgttgttgtcattctg
tccattgttggtatgttcctggcagacttgattgagaagtacttcgtgtcaccaaccttg
ttcagggtaatccgtctggctcgaatcggccgcattctgcgtctcatcaaaggagccaag
ggcatccggacattactgttcgctctgatgatgtcacttcctgctctgtttaacattggt
ctgctgcttttcctcgtcatgttcatcttctccatctttggcatgtctaacttcgcctac
gtgaagcgagaagtaggaattgatgacatgtataactttgaaacctttggcaatagcatg
atctgtctattcatgatcaccacgtcagctggctgggatggtctcttagctccaatcttg
aactatccgcctgactgcgaccctaataaagagaacccaggaaccactgttaaaggtgac
tgtggtaatccatcagtgggaatcttcttctttgttatgtacatcattgtttccttcctg
atcgtggtaaacatgtacatcgccatcatcttggagaacttcagcgttgccactgaggag
agcgccgatccgctgtgtgaagatgactttgagtccttctacgagatctgggagaagttc
gacccggatgcttctcagttcatcacctttgccaagctgccagactttgcagatacgtta
gagcatcctctccgcgtgccaaagccaaacatcatcgagctaatcgccatggatctaccc
atggtaagtggcgaccgcatacattgcttggacattctgtttgccttcaccaagcgtgtg
ctgggtgacagcggtgacctggatatgatgcgacagcaaatggaggagcgcttcgtggcg
gcaaatccctccaaagtttcctacgagcccatcaccaccacgctgcgccgcaagcaggag
gaggtgtcggccatggtgatccagagagcgtaccgtgcgcacctggcgcaccggggcttc
atctgcaagcgcaggcctgccaacaacaaacttgagaacggaggagccaatcaggagaag
aaagaaggcactccctccaccgcatccctgccatcttacgacagcgtaaccaagcctgag
aaggaaaagcaagacgacaacaatgaaggaaagggacgcaaagagaaaggcagaaaccaa
aaagacgtcagggaatccaagtgttaa
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integrated database retrieval system
