Triplophysa rosa: 130556346
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Entry
130556346 CDS
T09216
Symbol
sema3fa
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa isoform X1
KO
K06840
semaphorin 3
Organism
tros
Triplophysa rosa
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
Ig_3
PSI
Ig_2
Ig_6
I-set
V-set
zf_CCCH_5
Motif
Other DBs
NCBI-GeneID:
130556346
NCBI-ProteinID:
XP_057193235
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Position
LG7:complement(6554823..6595759)
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AA seq
798 aa
AA seq
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MQGARTLVLGTLLASVFSAVSVHSNLLSSLPPASVPRVSLSFKELKSTGTAHHFAFLLNS
TDYRILRMDEDHDRMYVGSKDYILSLDLNDINKEPLIIHWPVIPQRRTECVLSGKDINGE
CGNFIRLIEPWNRTHLYVCGTGAYNPICTYVDRGQRSQAMLEDQLPRAGGRTSRAADPSA
SPEPFAPKEYIFRLEPGKVDSGKGKCPYDPKLNSVSALINGQLYAGVYIDFMGTDSAIFR
TLGKHTAMRTDQYNSRWLHDPTFVHAQLIPDSAEKNDDKLYFFFREKASEMGQTPMAQSR
IGRICLNDDGGHCCLVNKWSTFLKARLICSVTGSDGIETHFDELRDVYIQKTHDTKNPTI
YGVFSVSGSVFKGSAVCVYSMGDVRMVFNGPFAHKEGPNYQWVAYQGKIPYPRPGTCPGG
TFTPNMKSTKDYPDEVINFMRNHPTMFNSVYPVHKRPLVVRTNVDYEFTTITVDQVAAAD
GNYEVLFLGTDRGTVQKVIVLPRDDLQTEELVLEEVEVFRVPTSITTMKISPKRQQLYVS
SAVGVTHLALHRCDVYGEACADCCLARDPYCAWDGKSCSRYSANQKRRSRRQDVKYGNPI
RQCRGYNSNANKNTLETVQYGVEASTAFLECQARSPHVSIKWHFQKENSDRRREIRSDGR
VVRTDQGLLLRSLQLSDGGVYQCTSTEKNFKHTLVRLQLVVLSARTVNAIQTETTAPAVP
PLQSSAWTPSAEQYKDLLTILSQPEMGLINQYCQDYWQMGDDPTAHTHKKKDLKEAAKDL
RKPRNRRHHQDQNSMAET
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagccaggactttggtgctggggacccttctggcctctgtgttctcagctgtc
tcggtccacagcaaccttttgtcttcactgccacccgcctctgttccacgagtctccctg
tccttcaaagaattgaagtcgactggaactgcccatcactttgccttcctgctcaactcg
acagactacagaattcttcgcatggacgaggatcatgatcgcatgtatgtggggagcaaa
gactacattttgtctctagacctgaacgatatcaacaaagagcccctcataattcactgg
cccgtcatccctcagagaagaaccgagtgtgtcctctcaggaaaggacatcaatggtgaa
tgcgggaatttcatccgtctcatcgaaccgtggaacagaacacacctgtacgtgtgcgga
acgggagcttacaaccccatctgtacctatgtggaccgagggcaaaggtcacaggccatg
ctcgaagatcagctgcctcgtgcgggaggccgaaccagtcgagcagcagaccctagcgct
tcaccagagccattcgcaccaaaggaatacattttccgtctggaacctggtaaagtcgat
tctgggaaaggaaaatgcccctacgaccccaaactaaacagcgtctcggctttgataaat
ggccagctgtacgccggagtctacatcgattttatgggaacggactctgccattttccgt
acgttgggcaaacacactgccatgaggaccgaccagtacaactcccgctggcttcatgat
ccaacgttcgtccatgcccagctcattcctgacagcgcggagaaaaacgatgacaagctg
tatttcttcttccgtgagaaagcgtcggagatgggtcagactcccatggcccagtccagg
atcggtagaatctgtctgaacgatgatggaggacactgctgtctggtgaataagtggagc
accttcctgaaggctcggctcatctgctccgtgacgggctcagatggaatcgagacgcat
ttcgatgagcttcgtgacgtgtacatccagaagacccatgacaccaagaatcccaccatc
tacggcgtcttctccgtgtctgggtctgtctttaagggttcagcagtatgtgtgtattca
atgggtgatgtgcgtatggtcttcaatggcccttttgctcataaagaaggacctaactac
cagtgggtggcataccagggtaaaattccttacccccgacctggaacatgtccaggaggg
acattcacacccaacatgaaatctactaaggattacccagacgaggttatcaacttcatg
cgcaaccatcccactatgttcaactccgtttacccagtccacaagcgccccctggtggtc
cgcaccaacgtggattatgagtttaccaccatcactgtagaccaagtggctgcagcagac
ggaaactatgaagttctgttcttgggaacagatcgaggtacagttcagaaggtgattgta
ttacccagagatgatcttcagactgaagagctggtgctggaggaggtggaggtctttaga
gttcctacttcaataactacgatgaaaatttcaccaaaaagacaacagctttatgtgagt
tcggcggtgggcgttactcatctggccctgcacaggtgtgatgtgtacggagaggcctgt
gctgactgctgcttggccagagacccttactgtgcctgggatggcaaatcctgttctcgc
tactccgcaaaccaaaaaaggcggagtcgaagacaagatgtgaagtatggcaatcccatc
agacaatgcagaggctacaattccaatgcaaataagaacacattggagacggtgcagtat
ggggtagaagcgagcacagcctttttggagtgccaggccagatctcctcatgtgtcaatc
aaatggcatttccagaaagagaacagtgacaggagaagagagatccgctccgacggacgt
gtagttcgcacagaccagggtctcctcctgcgctctcttcagctctctgacggaggcgtt
taccaatgcacctccaccgagaaaaacttcaaacacacgctggtcagactgcagctggtg
gttctctccgcccgcaccgtcaacgccatccagacggaaaccaccgcccccgccgttccg
cctctccagtccagcgcctggacgcccagcgctgagcagtacaaagatcttctgaccatc
ctgagccagcctgagatgggtctcatcaatcagtactgccaggactattggcagatgggg
gacgaccccacggctcacacccacaagaagaaagacctcaaggaggcagcgaaggaccta
cggaagccacgaaacaggagacaccaccaagatcagaacagcatggctgagacatga
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