Triplophysa rosa: 130556358
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Entry
130556358 CDS
T09216
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tros
Triplophysa rosa
Pathway
tros04810
Regulation of actin cytoskeleton
tros05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130556358 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130556358 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130556358 (cyfip1)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130556358 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
130556358 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
130556358
NCBI-ProteinID:
XP_057193265
LinkDB
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Position
LG7:12208837..12246789
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AA seq
1253 aa
AA seq
DB search
MTSAVTLEDALSNVDLLEELPLPDQQPCIEPLPSSIIYQPNFNTNFEDRNAFVTGIARYI
EQATVHSNMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYDELLAD
IVNLCVEYYENKMYLTPSEKHMLLKVMGFGLYLIDGTNSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEDNKSRWSCTSAGSSPQYNICEQMIQIRDDHMRFI
SELARYSNSEVVTGSGRQEAQKTDSEYRKLFDLALQGLQLLSQWSAQIMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVLAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTICDWEAGREPHNDPALRGEKDPK
GGFDIKVPRRTVGPSSTQLYMVRTMLESLVADKSGFKKTLRSSLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGCRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRAECKNQGANISWPTSNRYETLLKQRHVQLLGRSIDLNRLITQRVSCMLYRSL
ELAINRFESEDLTSIMELEGLLDINRLTHKLLSKFLTLDSIDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTILQFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IYSLYRNFLGPPHIKAICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVRTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAMLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGYLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIIMLLGQQRRYDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKFQIVNDEIFAIMNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgcagtgactctagaagatgctctgtccaacgtggacctgctggaggagctg
cctcttccagatcagcagccctgtattgaacctctgccctcctccatcatttaccagccc
aacttcaacaccaactttgaggaccgcaatgcatttgtgacaggcatcgcccgatacatc
gagcaggccacggtccactccaacatgaatgagatgttagaggaaggtcaggagtatgct
gtgatgctctacacatggaggagctgttcaagagccattcctcaggtgaaatgtaatgaa
cagcccaacagagtggagatctatgagaagaccgtggaggtgctggagccagaagtcacc
aaactgatgaacttcatgtattttcagcggactgcgatagatcgtttctgtggggaagtg
cgtcggctctgccacgccgagcgtaggaaggacttcgtgtctgaggcctaccttctcacg
ctggggaagttcatcaacatgtttgcggtgctggacgagcttaagaacatgaagtgcagc
gtgaaaaatgaccattccgcatacaagagagctgctcagttcctgaggaaaatgtcggaa
ccgtcctctattcaggaatcacagaacttatcaatgttcctggctaaccacaacaagatc
actcagtccttacagcagcagcttgaggtgatcaatggatatgatgagctactggccgac
attgttaacctctgtgtggaatactatgaaaacaagatgtacctcacccccagcgagaaa
cacatgctactcaaagtgatgggcttcggtctctatctgatcgatggaaccaacagcaac
atctacaaactggatgctaagaaaagaatcaaccttacaaagattgacaagtttttcaag
caactgcaggtggtgcctctgttcggtgacatgcagattgaactagcccgctacatcaaa
accagcgctcactatgaggataacaagtccaggtggtcgtgcacatctgcaggcagtagt
ccgcagtataatatctgtgagcagatgattcaaatccgtgatgatcacatgcgcttcatt
tctgagctggcccggtacagcaacagcgaggtggtgacgggttcaggtcggcaggaggcc
cagaagacagactctgagtacaggaagttgtttgatttggctctccagggcttgcagctg
ctctctcagtggagtgcacagatcatggaagtgtattcctggaaactggtgcaccccaca
gacaaatactcgaacaaagaatgccccgacaatgcagaagagtatgaacgtgccaccaga
tacaactacactagcgaggaaaaattcgccttggtggaggtccttgccatgataaagggc
ctgcaggtactgatgggccgaatggagagcgtcttcaaccacgccatccgtcacaccatt
tacgcagccctgcaggactttgctcaggtgacgctgagagagccacttcgccaggccatc
aagaagaagaagaacgtcatccagagtgtactacaggccatccgtaagaccatctgtgat
tgggaggcgggcagagaacctcacaatgacccggcgctgcggggagagaaggaccctaaa
ggggggttcgatatcaaagttccccggcgcaccgtaggaccctccagcactcagctgtat
atggtcaggacgatgctggagtctctggtcgctgataagagcggatttaagaaaactctg
cgcagcagtctggaggggcccaccatccttgacatcgagaagtttcaccgcgagtccttc
ttctacactcacttgctcaacttcagtgagacgctgcagcagtgctgtgatctttctcag
ctttggttccgtgagttctttctggagctcacaatgggctgccgcatccagttccctatt
gagatgtcgatgccctggatcctcactgaccatatcctggagactaaagaggcttctatg
atggaatacgtgttgtattcattggacctgtacaatgacagtgcacactacgctctcaca
aagtttaaaaagcagttcctgtatgatgagattgaggctgaggtgaatctctgctttgac
cagtttgtctacaaacttgcagatcagattttcgcctactacaagattcttgccggaagt
cttcttctagataagagacttcgagctgaatgtaagaatcagggagccaacatctcttgg
cctacttccaaccgctacgagacgctgctcaaacagagacacgttcagctcctgggtcgt
tcgatcgacttgaaccgcctgatcacccagcgagtgtcctgcatgctttacagatcccta
gagctagccatcaaccgctttgagagcgaggacctcacttccataatggagttggagggt
ttgctggacataaaccgattgactcataaacttctcagtaagtttttgacactggacagc
atcgatgccatgttccgggaggcaaaccacaacgtttccgcaccctatggcagaatcacc
ctgcatgtgttctgggaactcaactatgacttcttgcccaactactgttataatggctcc
acaaacaggtttgttcgcactatactgcagttttcacaagagttccagagggacaagccg
cccaacgcccagccacagtacctgtacggttcaaaggccctgaatctggcatacagtagc
atatacagcctctaccggaacttcctgggacctccacatatcaaggccatctgcagactg
ctgggatatcagggcattgcagtggtgatggaagagctcttaaaggtcgtcaagagtctg
cttcaaggcaccatcctgcagtacgtgaggaccctgatggaagtcatgcccaagatctgc
cgtctgcctcgccacgagtatggctcaccaggtattctggagttcttccaccatcagttg
aaggacattgtggagtacgctgagctgaaaaccgtgtgcttccagaacctgagggaggtc
ggaaacgctatgctcttctgtctactgagtgaacagagcttgtctcaagaggaggtgtgc
gacttgttgcatgcagcacccttccaaaacatcttgccaagagttcacgttaaagaaggt
gagcgtctggatgcaaagatgaagcggctggaggccaaatacacagcgctccatttggtg
cctctgattgagcgtctgggaaccccgcagcaaattgccatcgctcgtgagggtgacctg
ctgaccaaagagaggctgtgttgcggactctccatgtttgaagtcatcctgactcgcgtc
cgcggttatctggacgaccctatctggcgcggcccgttgcccagcaacggcgtgatgcat
gtagacgaatgtgtggagtttcataggttgtggagcgccatgcagtttgtctactgcatc
cccgtgggagcacacgagttcactgtcgagcaatgttttggagacgggctgaattgggcc
ggctgcatgattatcatgctactcggacagcaaagacgctatgatatcctggacttcagt
taccatctcctcaaggtgcagaaacacgacggcaaagatgaaatcatcaagagcgtgccc
ctcaagaaaatggttgaccggattcgcaagtttcaaattgtgaatgatgagatctttgcc
attatgaacaaatacctgaagtctggggacggagagaacatgcctgtagaacacgtccga
tgcttccagcctccaatccatcagtcactggccagcaactga
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