Triplophysa rosa: 130556408
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Entry
130556408 CDS
T09216
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tros
Triplophysa rosa
Pathway
tros03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130556408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130556408
03036 Chromosome and associated proteins [BR:
tros03036
]
130556408
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130556408
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130556408
Chromatin remodeling factors
BAF complex
130556408
PBAF complex
130556408
GBAF(ncBAF) complex
130556408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SnAC
Helicase_C
HSA
Bromodomain
BRK
QLQ
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
130556408
NCBI-ProteinID:
XP_057193368
LinkDB
All DBs
Position
LG7:complement(27427982..27451203)
Genome browser
AA seq
1641 aa
AA seq
DB search
MSAPEPPLGGTPCPGPSPGPGPSPGAVLGSGLSPGSSHTMMGPSPGPPTSTGHTFTQQGS
AVYSQENLHQLHKSVEENLPEEGRFAQMKVVPMRLGHSGLVVRPSSPMEQHSQGYPSPLG
SSEHVSSPVSASGTPSAPLLSTSLEVADTQPLQQSRLGTQSAAPGSPATPTPFNQSQLHQ
LRAQIMAYKMLARGQPLPEHLQMAVQGKRPMPGMQQGQSLSGLPPAGGGSAGFSRGHGMM
GPNMPPPGPSGVSSGVQGLNHNGPPKPWPEGPMINAATPSNAPQKLMPPQPTGRPSPAPP
SVPPAASPVMPPQTQSPGHLSHPSQATTIIPLHQKQNRITPVQKPCGLDPVEILQEREYR
LEARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETS
LDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSI
TAKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYL
LQQTDEYVANLTELVRAHKAVQALKEKKKKKKKKKKLESADGQTGALGPDGEPLDETSQM
SDLPVKVIHVDSGKILTGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSEEDEEEEEEP
PALLPSQSQSTEEKKKIPDPDSEDVSEVDVRHIIEHAKQDVDDEYGSAAFARGLQSYYAV
AHAVTERVDKQSSLMINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALIT
YLMENKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFN
VLLTTYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPL
QNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRP
FLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKT
LMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGLDLYRASGKFEVLDRILPKLRA
SNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNDPASQYFIFLL
STRAGGLGLNLQSADTVIIFDSDWNPHQVTIPSASAFGEAFRRLCVCVCVCVCVCVCVCV
CLLSVLVLCVQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA
GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRR
REDARNPKRKPRLMEEDELPTWIMKDDAEVERLTCEEEEGKMFGRGSRQRKEVDYSDSLT
EKQWLKAIEDGTLEEIEEEVRHKKTARKRRRDRDTDAIPSTSGARGGRKRDDDSKRQKKR
GRPPAEKLSPNPPSLIKKMKKIVDAVIKYKENNGRQLSEVFIQLPSRKELPEYYELIRKP
VDFRKIKERIRSHRYRSLNDLERDVMQLCQNAQTFNLEGSLIYEDSIVLQSVFTSLCQKV
EREEESDGEESEEDDEDEGSDSETRSVKVKIKLSRKDRSAERGRGRRRTARTRAKPVVSD
DDTDEEQEEDRSNSASEDEQG
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccagagcccccgctaggagggacgccgtgtccaggaccctcgcccggtcct
ggaccttctcctggggccgttctgggttcagggctgtctcctggatcttcacacactatg
atgggtcccagccccggacccccgacttcaacaggacacacttttactcaacaaggatct
gcggtgtacagccaggagaacttacaccaactgcacaagtctgttgaggagaatcttcca
gaagagggtcgtttcgctcagatgaaggttgttcccatgaggttgggacacagtggtctg
gtggtgcgtcccagcagcccgatggagcagcattctcaaggttacccgtccccgcttggc
tcttcagaacatgtgtccagtcctgtgtctgccagcggtactccgtccgctcctctcctg
tccacctcattagaggtcgcagacacccaacctttacagcagagccgcctggggacccaa
agtgccgcccccggctcgccggccaccccgacacccttcaaccagagtcagctgcatcag
ctgcgggctcagatcatggcgtataagatgctggctcgcggacagccgctcccggagcac
ctgcagatggcggtgcagggcaagcggcccatgccgggcatgcagcaggggcagtctttg
tccggtttgccccctgctggtggaggcagtgctggattcagccgagggcacgggatgatg
ggtcccaacatgcccccacccggaccttctggagtctcgtctggtgttcagggcctgaat
cacaacggacccccaaaaccatggcccgagggtcctatgattaatgccgccaccccctca
aatgcccctcagaaactgatgcccccgcagcccaccggacggccctcgcccgcaccccct
tcggtgccaccggccgcctcccccgtcatgccccctcaaacccagtcaccagggcacctg
tcccacccgtctcaagccacgactatcatccccctgcaccagaaacagaaccgcattaca
cccgttcagaagccctgcggtctggacccggtggaaatacttcaggagagagagtacagg
cttgaagctcgtatcgcccaccgcattcaggagctggagaatctgcccggctctcttgct
ggagatttacgcaccaaagcgacgattgagttaaaagctctgcgactgctcaatttccag
agacagctgaggcaggaggtggtggtgtgcatgaggcgagatacagccttagaaacctca
ctggatgctaaagcctacaagcgcagtaaaaggcagtcactgcgagaagcccggatcacc
gagaaactggagaaacagcagaagattgagcaggagcggaagcgcagacagaaacatcag
gaatatctcaacagcatcctgcagcatgccaaggacttcaaggaatatcatcgctccatc
accgccaagatccagaagctgaccaaagccgtggccacgtaccacgccaacaccgagaga
gagcagaagaaggaaaacgagaggattgagaaagagagaatgagaagactcatggctgaa
gatgaggagggttaccggaagctcatcgatcagaagaaagacaagcgtctggcgtatctc
ctccagcagacggatgaatatgtggctaacctgacagagctcgtgcgcgctcacaaagcc
gttcaggctctgaaggagaagaagaagaagaagaagaaaaagaagaagttggagagcgct
gatggacagacgggtgctctgggacctgatggagagcctctggatgagacgagtcagatg
agtgatcttccagtgaaggtgattcatgtggacagcgggaagattctaaccggagtggac
gctcctaaagccggacagctggacacgtggttagagatgaatcctggttatgaagtggct
ccacgatcagacagtgaagattctggatcagaggaggatgaggaggaggaagaggaacct
ccagcactgctgccctctcaaagtcaaagtacagaagagaagaagaagattccagatcca
gacagtgaagatgtgtcagaggtggacgttcggcacatcatcgaacatgccaagcaggat
gttgatgatgagtacggcagtgctgcgtttgctcgtggcttacagtcgtattatgccgtg
gctcatgcggtcactgagagagtcgacaaacaatcgtctctcatgatcaacggtcaactc
aaacaataccagatcaagggtttggagtggctggtgtctctctataataataatctcaac
gggattctggctgatgagatgggtttggggaagacgatacaaaccatcgctctcatcacg
tacctgatggagaacaagcgtctgaacgggccatacctcatcatcgtgccgctctcgact
ctgtcaaactgggtctatgagtttgataaatgggcaccttctgttgtgaaagtctcatac
aagggatctcctgcagctagaagagctttcgtgccgcagctgcgcagtggcaagttcaac
gttctgctcaccacatatgaatacatcattaaagacaaacagattttggcaaagattcgc
tggaagtacatgatagtggatgaaggtcatcgtatgaagaaccatcactgtaaactgaca
caggtgttgaacacacattatttggctccgcgccgcgtgctgctcacagggacgccgctg
cagaataaactgcctgaactctgggctcttctcaacttcctgctgcccaccatcttcaag
agctgcagcacgtttgagcagtggttcaacgctcccttcgccatgaccggagagaaggtg
gatctgaacgaggaagagaccatcctgatcattcgtcgtctgcataaggtgctccgcccc
ttcctgttacgccgactgaagaaagaggtggaggcacaactgccagagaaggtggagtat
gtgattaagtgtgacatgtcggctctgcagagggttttatatcgacacatgcaggctaaa
ggagttctgctcactgatggatctgagaaagacaagaagggtaagggcgggactaagact
ttgatgaacactattatgcagttgaggaagatttgtaatcatccgtacatgtttcagcag
atcgaggaatctttctctgagcacttgggattttcgggcggtatagttcaggggcttgac
ttatatcgagcgtcaggaaagtttgaggtgctggatcggattttacccaaactacgagca
tctaaccacaaagttctgctcttctgtcaaatgacatcattgatgaccatcatggaagat
tattttgcttaccgcggtttcaaatatctgcgtctggatggcacaactaaagcagaggat
cgtgggatgctgctaaagaccttcaatgatccggcttctcagtattttatcttcttgttg
agcacaagggcaggtgggctgggtctgaatctgcagagcgccgataccgtcatcatattc
gacagcgactggaatcctcaccaggtcacgatcccgtctgcgtctgcatttggagaagcc
ttcagacgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtctgctgagcgttctggtgttgtgtgtgcaggacctgcaggctcaggaccgagcgcac
cggatcggacagcagaacgaggtgcgagttcttcgtctttgcaccgtcaacagcgtggaa
gagaagatactggcagctgctaaatataagctgaatgtagatcagaaggtgatccaggct
ggcatgtttgaccagaaatcttcaagtcatgaacgcagagcctttttacaagccattctg
gaacacgaggagcaagatgaggaggaggacgaggtgccggatgatgaaacggtgaaccag
atgatcgctcgtagtgaagaggagttcgaccagttcatgcgcatggacttggatcgtcgc
cgcgaggacgcccgcaaccccaaacgcaaacctcgtttgatggaggaagacgagctgccc
acatggattatgaaggacgatgcggaggtggaaaggctcacctgtgaggaagaggagggg
aagatgttcggccgtggctcccggcagagaaaagaggtggattacagcgactcgctcaca
gagaaacagtggctgaaggccatcgaggacgggaccctggaggagatcgaagaagaggtg
cgacacaagaagacggctcggaagaggaggcgcgatcgggacacggacgccattccttcc
acctctggagctcgcggaggcagaaagagagacgacgacagcaaaaggcaaaagaaacga
ggtcgtccgccagcagagaaactttcaccgaacccgccgtcgcttatcaagaagatgaaa
aagattgtggatgccgttattaaatataaggaaaataacgggcgtcagttaagtgaggtc
ttcattcagctgccgtcacggaaggagcttccagaatactacgagctcatccgcaaacct
gttgacttcaggaagatcaaggaacgcatccgcagtcaccgataccgtagcctgaacgac
ctggagagagacgtcatgcagttgtgtcaaaacgcacaaacctttaacctggagggttca
ctgatctatgaggactccatcgtgctgcagtcggtttttaccagcttgtgtcagaaggtc
gagagagaagaagagagtgatggagaggaaagtgaggaagatgatgaagatgaaggttca
gattccgagactcggtcagtgaaggtgaagattaaactgagccgtaaggacagaagtgca
gagcgtggcagagggcgcagaagaacggccagaactcgagccaaacctgtcgttagtgat
gacgatacggacgaggaacaggaggaggatcggtccaacagcgccagtgaagatgaacag
ggatga
DBGET
integrated database retrieval system
