Triplophysa rosa: 130556998
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Entry
130556998 CDS
T09216
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
tros
Triplophysa rosa
Pathway
tros03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130556998 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130556998 (mbd6)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130556998 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
130556998
NCBI-ProteinID:
XP_057194377
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All DBs
Position
LG7:complement(1967418..1982036)
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AA seq
1355 aa
AA seq
DB search
MTGGSECAAGDKDEGTTIIAQVPVGWQRKAQEGPVSYISPSGTVLRSVDEVKVYLRTDGT
CKCGLECPLVVNKVFNFDPAAMVQAPGHQSGKIEEDMTKLCNHRRKVDAMAALCQSMQPS
QLPPTGGVVCSVDGRESRGSIAAHGESANCTYLQPRHNQVKSSNLPLTSHRSVLQNGSNS
PLKKPSCQAPAGSNASSSTKQQWNLHPPLTPQNILQRTLHTPTSPNNNLLPNTFSNSPST
LIGRAAQQGGSVKSPSPLSVCSSPSRTLESFSPHQRSRHSSTSSLSEQGVKPSPPTMPCS
SPKLPFSPTSPCSRLEGILQHYKDCSTSSSTKSTVTNNQSNHQMSQVASSARPNPADKRN
GAAAQASNLLSRPLGQIRSRQKSQQHISNSFPASSLLSAAAKAQLANQKTLNTADALSAL
PLTGLDKEQQSKVLISTLNSNLHPTSARVQSLTTLLLPHSPSLSQKPPEKTLRRKRQRRS
PTVLSMLKETQLRDLSTPPLLISPSHSPSSPPIPISDTHRLPVAPLNASFQNAALRLQEA
DESRKAGLCNSLPFSSPSPSQPLSALLQLLSMQSAQNTTQQSNNAASMPSNRHTHPSPSS
PRPVTPQYDGQNALQVHIHTSQSQNSEASAQLPLTQFSLMGDETTMNLKTTSSNAVLNLS
KSHTGMQSDLSGSVMSVINQMSSASCLTPQSDKGCGPKTPEMCPVNNTYQNQSNPNQAVE
SKSPLETPDQPDSETKLLSGCEPDHNLSLPGAPTTSEFSNHASDSTVSLPLAEAFPFMSQ
EQLLQLLTSNAGLPSLLPPFLGSLPLGIWTGQSSAPGGAQPQQAAGGILNQGSPLNMLSD
LPLNLVSLPSSAGVDGAEKPPGLQALLMASLLLGQNPAAMLPLPPLNLELPAPQHQVFPE
GISLEKTPALLDSVLMWPGLLEALQTLTPSVDGQSLLLSAPPPAFLSLNPALLAAALGQS
EPIPNHMQSPPVHSQGTLSSPALVSTSVSCGPLVPPSGREVCDPLTEQDKNTQTPHFLPS
LLGPGVLGDLTALGNINSLHSLLGAGPLLLPQGPSLGVPLTQNQTLNPLTCLQLTMGPTL
MTEKPVSLHETPPSQEELTSAQISQDPLLNPVPAPAQQKEDSAGGGTGLFDPYGSFMDTI
YTSFLQVSERTQSGSDSTPLSYPELPPLLQQTSAPPSLSPRRACSVHNPDLTRLGMETAQ
SPARGTPKLSPQDPSTPPPCKPAGVDALSDAPLQPAFMEEAKTDGSSKVCLYSNGISSGM
ERRGENDEDDVGQSQPGYLSTGERAVDDITSRNAEQERTEDMRTETRRSRKRKQTLQRGL
DLPGGIDSIIEEPTATRTVSRPARSTRGKRRRVFR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgacagggggcagtgagtgtgcagcaggggataaagatgaaggtacaacgatcatcgcc
caggtcccggttggctggcagagaaaagctcaagaggggcctgtgtcttacatcagccca
agtggaactgtcctgcgatctgtggacgaggtgaaggtgtatctgcggacagacggcacg
tgtaaatgtggacttgagtgcccgcttgtcgtaaataaggtttttaacttcgaccctgct
gcaatggttcaagctcctggtcatcagtcaggtaagatagaagaagacatgaccaaactc
tgcaaccatcgcaggaaagttgatgccatggcagcgctgtgccaaagcatgcagccgtct
caacttcccccaacaggaggtgttgtgtgctcagtggatggcagagagtcgagaggatct
atagcggctcacggagaaagcgccaactgcacttaccttcagccgagacacaaccaggtc
aaatccagcaacttacctttgacctcccatcgctccgtcttgcagaatggctccaactca
cccttaaagaaaccctcgtgtcaggcacctgcggggagcaatgcgtcctcttctacaaaa
cagcagtggaaccttcatccacccctcacccctcaaaacatccttcaaagaacacttcac
acgcccacctctcccaacaacaacctcctccccaacaccttttcaaatagcccctcgact
ctgattggtcgagcggcacagcagggaggaagcgtaaagtcgccctctcccctttcagtt
tgctcctcaccctcacgcacgctagagtccttctcaccccatcaacgctctcgccactcc
tcgacctcgtcgctctccgagcagggagttaaaccctcaccgcccaccatgccgtgctcc
tctcccaagctccctttctcccccaccagcccgtgcagtcgtctggaaggcatcctgcag
cactacaaagattgtagtaccagttccagcactaagtccaccgtcactaacaaccaaagc
aaccatcagatgtcgcaggttgcatcgtcggctcgtcccaacccggctgacaagaggaac
ggggcggccgctcaagcctcaaacctgctcagccgtcctctaggacagatccgcagtcga
cagaagagccagcagcacatcagcaactcctttccggccagcagtctcctatctgcagcg
gccaaagcccagttggccaaccagaaaactctgaacacagccgacgctctgtctgctctc
cctctcacgggtctagacaaggaacagcagtcaaaggtattgattagcactttaaacagt
aacctccatcccacctcagccagagtgcagtccctcaccaccctcttgcttccgcactcc
ccttccctttcccagaagccccctgagaaaaccttacgacgcaaacgccagcgacgctcg
cccaccgtgttgagcatgctcaaagagacgcagctgagagatctgtccacgccgcctctc
ctcatctctccatcccattctccctcctctcctcccattcccatctcggacacccaccgg
ctccctgtcgctcctttaaatgcctctttccagaacgctgcgctgaggctacaggaggcc
gatgaaagcagaaaggcgggactctgtaattcccttccgttttcctccccgtctccgtcc
cagcctctctccgccctgcttcagcttcttagcatgcagagtgcacaaaatacaacccag
cagtccaacaacgcagcttctatgcccagcaatagacacacgcacccgtcaccctcttca
cccagacccgtaacgccccagtatgatggccagaatgctttacaggttcacattcacacc
tctcaatcccaaaactcagaggcatctgcccagctgccccttacacaattttctctgatg
ggtgacgagacaacgatgaacctcaaaacaacctccagcaatgccgtcctgaacttgagc
aagtcccacacgggcatgcagtcagacctcagcggttcagttatgagcgtcatcaaccag
atgtcctcagcatcttgcttgacccctcaatcggataaaggttgtggacccaaaacgcca
gagatgtgtccagtcaacaacacctaccagaatcagtcaaaccccaaccaagctgttgag
agtaaaagtcctttagagacgccagatcagccagactcggaaacaaaactactgagcggc
tgcgagccggaccacaacctctctctgcccggcgctcccaccacctccgaattctccaac
catgcgtccgactccactgtttccctgccgttggccgaagcttttcccttcatgtcccaa
gagcaacttctccagcttctgacatctaacgctggtctgccctctctcctgccacccttc
ctcggctccttgcctttaggaatctggaccggtcagtcctctgcgcccggcggcgctcaa
ccccagcaagcggccggtggcatcctgaaccagggctctcctcttaacatgctgagcgat
cttcctctcaacctggtcagtctgccgtcttctgcaggagtggacggggccgaaaagcct
cctgggcttcaggctctcctcatggcctctctgctgctaggacagaatccggcagccatg
ttgccgttaccgccgctcaacctggaacttccggcaccacagcatcaagtgtttccggag
ggaatatctctggagaagacgcccgctctgctggactctgtcctgatgtggccggggctc
ctggaggctcttcaaactctaacaccctctgtagacggccagtcactgctgctttctgcc
cctccacccgccttcctctccctcaatcccgctctgctggcagcagctctcggccagtcc
gaacccatccctaaccacatgcagtctcccccggttcattctcagggcactctgtccagc
cctgctctagtttctacctcggtgtcctgtggccctctggtgcccccctcagggcgggaa
gtgtgtgaccctctgaccgagcaggacaagaacactcaaacacctcatttcctgccatct
ctgctcgggcctggagttcttggtgatctcactgctctggggaacattaacagtcttcat
agtttactaggagccggtccactgctgctgcctcagggcccgtctctgggcgtcccgctg
acacagaaccaaactctcaacccgctgacctgtctgcagctcacgatggggcccacgcta
atgacagagaagcctgtgtctctacacgagactcctccatcacaggaagaactcacatcg
gctcagatttcccaagatcccctgctcaacccggtcccagcacctgcacagcagaaggag
gattcggcaggtggcgggacgggtctgtttgacccctacggctccttcatggacaccatc
tacacctccttcctgcaggttagcgagcgtacccagagcggttctgactcgacgccgctg
tcatatccagaactgccgcccctccttcagcagaccagtgccccgccctctctcagccca
cgtcgggcgtgttcggtccacaatccggacctgacgcgtctcggcatggagacggcccag
tctccggcccgtggcacgcctaaactcagccctcaggacccctccacacccccaccctgc
aaaccggcgggtgtcgacgccctgtcagatgccccactgcagcccgctttcatggaggag
gccaagactgatgggtcgtccaaagtgtgtctctatagcaacggcatcagttcaggaatg
gagcgaagaggagaaaacgatgaggatgatgtgggacaaagccagccgggatatttgagc
accggtgagagggcggtggatgacatcaccagcagaaacgcagagcaagagaggactgaa
gacatgcgcacagaaaccagaagaagccgcaagagaaaacagactctgcagagggggctg
gacctgccgggggggatagacagcatcattgaagagcccacggccacgagaacagtgtcg
cggccggcgagatccacgaggggaaagaggcgacgtgtgttccgatag
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