Triplophysa rosa: 130557177
Help
Entry
130557177 CDS
T09216
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a isoform X1
KO
K19574
obscurin-like protein 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130557177 (obsl1a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
130557177 (obsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_4
Ig_6
C2-set_2
Izumo-Ig
V-set_CD47
Receptor_2B4
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
130557177
NCBI-ProteinID:
XP_057194756
LinkDB
All DBs
Position
LG7:complement(19864654..19885434)
Genome browser
AA seq
2283 aa
AA seq
DB search
MDVFGGAPRVLGYPRPVLVKCGTDAILKCQIGGDPQPDVIWERKNEPIPSEGRYRIAQEG
KVYTLSISRVTVEDAGQYICKAKNNIGDTYAAATLKVEEEALELQITQPPPPPQQQLQNE
VNVIPPEQEITMIKQQQLEKVHQEDPFHENKPRFLIKPLSLRVDRGEDAAFSCKLWGDPL
PEVVWKKDGKHLNEIYESAHYHVGQQDGGWFQLKIFRTRAPDGGVYTCKAMNEYGEAMVG
AVLLVETIPEQRRESVTNGYTNGHCSTHQSRDVHTKAKHSKEPHLNVAKAKKFTVTEGKH
AKFRCYVTGKPKPEIVWKKNGEVIAPGRRYLIFEDREGYYTLKVLYCKQQDTGLYICAAS
NALGNTLSAVHLSVKGPPVCFKRALQDVEVRERDVAILECEVPEESISTAWYLEDQRIQP
GNKYNMEQKGTRRWLTIQDVGADDDGVYLCEMPDGGKSIAELAVKGTIVKKLPRRLEVME
GENAAFCVEVDEDEMDIYWFKDRLQLKETHQIIIKSFGKTHILVFVNTSYEDSGTITFMA
GRSKTSSKLRVKTARHCPPICPVSVQMNTDCPNGAILSWSPSPNLQNSSKSVCVLERQEV
GSQEWQRCLTTETGTSAEILGDSVPCEGDYRFRVCCVNKYGRSGHVEFPKAIHLVPGPKI
KVPLKNAVVTEGEDAVFSIELSTSMIGTWFLNSMQLQDSERFSVAQSKNQHILRIHQVPH
VYDGAEITFIATGVRDSAVLQIKAAVVKFVPLSEIDTEKCVEVGNPIVLYCEVSHSTATV
NWFKDGQEISVDEKINIQSDDFMRRIVIQSAEYSDSGVYTCRSNNDVLTFNVNVEATRFT
FECLSEAEKNRSIEAGDPIVLHCEVSNPDAEVCWFRNGEPVSPQDGIEIQTNGNIRTLII
QSADYYDSGTYSCQSADDVAVFQVDVTGPPVSFKEVPQEERQKNTMELNPVVLTCELSRP
DAPACWFKDGLEVLQSDNITVQAEGTMRRLIIRSAKIADAGTYTYQAGDNAMSFSVNIKE
PPVTIVDPKDDVHIERYVSEEIVLKCELSRSNGDVQWFKDGLKLQESENILLSAEGPYRM
VTILHAFRRDSGEYVCDTGDDSVFFQLIVTEAPVRFVSPSEPEVDVCILSSERLVLSCEI
SKADAEVCWYRDGMEVEENDNLILEDDGIYRRLEIPCTTIDDSAEYVCEIADDSVTFWVK
IEEPPVQLSCSKESGSLTESFTGDPVVLELEVSRNNADVCWMKDGVKVEESSNITITENG
LVRKLTIHSPTQKDSGIYTCNAIDDTMDFLVKINESPIKILKKDEIKIEHKVALYDDIVL
ECELSQANSVVNWYKNGSPIEEKERFCFEEEGTFRTLVILCAELQDSGEYVLDANDDKIS
FHVTVQEPAVRIIGNSGESEYQEMVTGDDLILACEVSRANAPVTWFFNDKPLVPNERMHI
ESNGTLRRLTSSNLLLSDSGKYICDAVDDKMITVVKVQEPPVEFLNKEEVNLVTGYEAES
LTLTAMVSRHNAPVRWLKDWTSVSGERFYIGSEGLTHTLTIDPLKRLDSGEYMCDANTDE
MHFSLLVKEMRIKFVKPLVDTVGHKDGMVTLRCELCKPKADVQWLKDGVEIIPSRRFSIR
ADGPERSLTIHRISKEDAGEYACESKDDCTRARLRVELPRVVEFLTELRNTTVMEGEDAT
FKCVVSPDDVQLVWLMDGEAINPSDRFHIEQNGLCHTLIIRKVQHLDSSRITAEAEGVIS
KASLKVQDAQVLFTKRMDAVMAEEFGEATLETEVSLESGEVQWMRQGVVIQPGPRHKLTQ
NGCKRSLTISNLNLSDRGTYRCETLHDRTQVKLNVEPRKIVIRRGLMDVETYERETASFE
VELSHADVEGVWQKDGLRIKPSNTFRVSSNGRVHGLTLSNLMVEDSGCIVFMGEGLRTTS
RLVVKEPPVMIIKRLSDVRCEDGSSVTLECELSRQNVDVIWQKNGLELKSTKALRIYSMG
RKRCLQIMESSVSDSGVYTCDLGDLNSSCKLEVYERELEIITGLKDLCIKEDQNAVFMCE
VSMEEMPGEWYKNGSRIRPTSTIKTRREGTKHFLLICNVKAEDSGEIKFVSKQIESIAHL
EVEELPASIVRPLRDRTALEKHRVILECTVSSPRCDVTWYKEGEELESTEHMEIIEEDCY
HKLIIHQVALEDEGTYSIEVGEHTSTAKLLVEAQSIQVKKNLEDVEVRAPEPACFQCEVS
VTLVKPPIWTLKGETLQSGPDVRIENRGSVHKLTFRKTSCDMSGIVQFNTGKAKSSAKLT
VLN
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttttggaggtgctccgcgtgtgctcggttacccaaggccagttctggtgaaa
tgtggaaccgatgccatccttaaatgtcaaattggtggagatccccaaccagatgtgatc
tgggagagaaagaatgagcctattccctctgagggacgttatcgtatcgcccaggagggc
aaagtgtacaccctttccatttctagagtgacagtagaagatgctggacagtatatttgc
aaagccaagaacaatattggagatacctatgcagctgctacccttaaagtggaagaagaa
gctctagagctccagataacacaacctccaccaccaccacaacaacaactacaaaatgaa
gtaaatgtgattccgccagaacaggaaattacaatgataaagcaacaacagttagagaaa
gtacaccaagaagacccattccatgaaaataagcctcgatttctgatcaaaccactttcc
ctaagagtagaccgtggagaagatgctgctttctcctgtaagctgtggggtgaccccctg
cctgaggttgtgtggaagaaagatggcaaacacttaaatgagatctacgagagtgcacac
taccacgttggccagcaagatggtggctggttccaactgaagatttttagaacaagagcc
ccagatggaggtgtctacacgtgcaaagcgatgaatgagtacggagaagcaatggttggt
gcggtgctcttggtggagaccattccagagcaaagacgggaaagtgtgacaaacggctat
accaatgggcactgctcaacacatcaaagtagagatgttcatacaaaggccaaacactcc
aaagagcctcacctgaatgtggcaaaggctaagaaattcactgtgacagaaggcaaacat
gccaagttccgttgttatgtaactggaaagcccaaaccggagattgtatggaagaaaaat
ggggaggttattgcaccaggtcggagatatctcatttttgaagacagagaaggatattac
acactaaaagtgctgtactgcaaacaacaggatacaggactttacatatgtgctgcttca
aatgcactgggaaacacattgagtgctgtgcacctgtcagtaaaagggccaccagtctgc
ttcaagcgagcattacaagatgtggaggttagggagagggatgttgccattttggaatgt
gaggttccggaagagtccatttccacggcatggtacttggaagatcaaagaatacagcca
gggaataagtataacatggaacaaaagggcacacggagatggctcaccatccaagatgtt
ggggcggatgatgatggggtttacctgtgcgagatgcctgacggtggaaagagtattgca
gaattggcagttaaaggtacaatagtgaaaaagcttccacggaggctagaggtaatggag
ggagagaatgcagcattctgcgttgaggtagatgaggatgagatggacatctactggttt
aaggatagactgcagttaaaagaaacacatcaaatcatcatcaagtccttcggaaaaacc
cacatcctggtctttgtcaacacatcgtacgaagactctggaacaatcacctttatggca
ggcagatcgaaaacaagttccaagctaagagtcaaaactgctcgacattgcccacccatt
tgtcctgtgagtgtccagatgaacactgactgtccaaatggtgccatcctctcctggtca
ccatcgcccaacttgcaaaactccagcaagtcagtgtgtgtgctagagcgacaagaagta
gggtctcaggagtggcagcgatgcctgaccacagagactggcacttctgctgagatccta
ggtgacagtgtgccatgtgagggtgactatagattccgtgtctgctgcgttaataaatat
ggcagaagtggccatgtggagtttcccaaagcgatacatctggtccccggtccaaagatc
aaagtccctctgaagaatgctgtggtcacggagggggaagatgctgtattctccattgag
ctctcaacttccatgatcggcacatggttcctgaatagcatgcagctgcaggacagcgaa
cgcttctccgtagcccagtcaaagaaccagcacatcttacgtattcatcaggtgcctcac
gtgtatgatggagctgagatcacctttattgctactggtgtacgagattcagcggtacta
cagattaaagccgctgtggtgaaatttgtacctctgtcagagatagacaccgagaagtgc
gttgaggtgggaaaccccattgtactgtattgtgaggtgtcccactccacggccactgtt
aactggttcaaagatggacaggagatcagtgtagacgagaagataaatatccaatcagac
gacttcatgcggaggattgtcattcagtcagcagaatattctgattctggagtgtacacc
tgcagatcgaacaatgacgtgctcacatttaatgtgaatgttgaagcgacccgcttcacg
tttgagtgtctgtcagaagcagagaagaacaggtctatagaggctggagatcccatagtt
ctccattgtgaggtgtcaaacccagacgctgaggtgtgctggttcagaaatggggagcct
gtctctccacaggatggaatagaaatccagacgaatggaaacatcaggacgctgatcatc
cagtctgcagattattacgattctggcacatatagttgtcagtcagctgatgatgtagct
gtgtttcaggtggacgttacaggtccacctgtgtcatttaaagaggttccacaagaagaa
aggcagaaaaacactatggaactgaaccctgtggttttgacctgtgaactctcacgacca
gatgcacccgcctgctggtttaaagatggacttgaggttcttcagtcagacaatattacc
gtccaagctgaaggcaccatgagaagacttataatccgttcagccaagattgccgatgct
gggacatatacataccaagcaggcgacaatgccatgtcgttttctgtcaacattaaagaa
cccccagttacaattgtggacccgaaggatgacgtacacatcgaacgatatgtctcggag
gaaatcgtcctgaaatgcgagctctctcgttctaacggagacgttcagtggtttaaagat
ggcctgaagcttcaggagagcgaaaacatccttctcagtgccgaggggccatacaggatg
gtgactattctccatgctttcagacgggattctggggagtatgtatgcgatacaggggac
gactcagttttcttccagctcattgtcacagaggctccagtgcgttttgtgtcccccagt
gagccagaggtagatgtgtgtatactgagttctgagaggctggtcctcagctgtgagata
tccaaagcagatgcagaagtctgctggtatcgtgatggcatggaggtagaggagaatgat
aacttgatactggaggatgatgggatttaccgcagactggagattccatgcactaccata
gatgattctgcagaatatgtatgcgagatagcagatgactctgtcacgttttgggtgaaa
atagaagagccgcccgttcagctttcttgctccaaggagtcaggtagtttaacagagagt
tttactggtgatcctgtggtcctggagcttgaggtttcccgtaataatgcagacgtgtgc
tggatgaaggacggagttaaggtggaggagagcagcaacattacaattactgagaacggc
cttgttcgcaaactaaccatccattcaccaactcaaaaggattctgggatatatacatgc
aatgctatagatgacacaatggatttcctagtcaaaataaatgagtcaccgataaaaatt
ctaaagaaagatgagatcaagatagagcacaaagttgcattgtatgacgacattgtgtta
gagtgtgagctgtcccaggccaacagtgtggtcaattggtataaaaacggcagtcctatt
gaggaaaaggagcgcttttgttttgaagaggaagggaccttcagaaccttagtcattctt
tgtgccgagctgcaagactctggagaatacgtcctcgatgcaaatgatgataagatttca
tttcatgtcacagtacaagagcctgcggtgaggattattggaaactctggtgagtccgaa
taccaggagatggtgacaggcgatgacctcatcttagcttgtgaggtttctcgagccaat
gcacccgttacgtggttctttaatgataaaccattggtccctaatgagcggatgcatatt
gagagcaatgggacactccggagactgacgtcatccaacctcctcctctctgactctggg
aaatacatttgtgatgctgttgacgacaaaatgattactgttgttaaagttcaagagccc
ccagttgagttcctcaacaaagaagaggtgaacttagtgactggttacgaagcagagtct
ttaaccctgaccgccatggtttctagacacaatgccccagttcggtggcttaaagattgg
acttcagtcagtggagaacgcttctacataggcagcgagggcctgacccacactctcacc
atcgacccattaaagaggctcgacagtggagagtacatgtgtgatgcaaacacggatgag
atgcacttcagtctactggttaaagagatgcgtattaaatttgtaaaaccactggttgac
acggtgggtcataaagatggtatggtcacactacgctgtgagttgtgcaagccaaaagct
gatgtccaatggcttaaggatggagtggagatcattcccagtcgtcgcttctctatccgt
gccgacgggccagagaggagtcttaccatccatcgtatctccaaagaagatgccggagag
tatgcttgcgagtccaaagatgactgcacccgcgccagattaagggtggaattgccccgt
gtggtggaattcctcacagagcttcgcaatactacggtcatggagggtgaggatgctacc
ttcaagtgtgtggtctcccctgatgatgttcagctggtctggctcatggacggagaagcc
atcaatcccagtgatcgcttccatatcgaacagaacggcttatgtcacactctgattatc
cggaaggtccagcatctggattcttcccgaatcacagcagaggctgagggtgtcatatct
aaagccagcctcaaggtccaggatgcacaggtgttgtttaccaaaagaatggatgcagtg
atggctgaagagtttggagaggctacgttggagacagaagttagtctggagtctggagaa
gtgcagtggatgagacagggggtggtgatccagccaggacccagacataaactgactcag
aacggctgtaaacgcagcttgaccatctctaacctcaacctgtccgatcgaggcacatat
cgctgtgagacccttcatgatcgtacgcaggtcaaactcaacgtggagccgaggaagatt
gtcatacgcagggggctgatggatgttgagacatatgagagagagacggcatcctttgag
gtggaactttcgcacgctgatgtggagggcgtgtggcaaaaagacggtctgcgtataaaa
cctagtaacacctttcgcgttagttccaacggacgagtacacggcctcactctctccaac
ctcatggtggaggattcggggtgcattgtctttatgggagaaggtctgagaacaacttcc
aggctagtagtgaaagaaccgccagtaatgatcattaagaggctgtctgatgtcaggtgt
gaagacggatcttcagtcactttggagtgtgagctgtctaggcaaaatgtggatgtcata
tggcagaagaacgggttagagcttaaatccaccaaggctttgaggatttattccatggga
cgtaagcgttgtttacagatcatggagtccagcgtcagtgactcgggcgtttatacctgt
gacctaggtgatctcaactcttcctgcaaacttgaggtctatgaacgcgaattagagatc
ataactggcttgaaggatctttgcattaaagaggaccagaatgctgtttttatgtgtgag
gtgtctatggaagaaatgcctggggagtggtacaagaatggcagcaggatacgtccaacc
agcaccattaaaactcgtagagagggcacaaagcacttcctacttatatgcaatgtgaag
gcagaagattctggggagatcaagttcgtttccaagcaaatcgagtcgattgctcatctt
gaggtcgaagagctccctgcaagcatcgtccgtccccttagggatcgcacagcactagag
aaacacagagtcattctcgaatgcaccgtgtcatccccaaggtgtgacgtcacatggtat
aaagagggcgaagagctggaatccacagaacacatggaaataatagaagaggattgttac
cataaactgatcatccaccaggtggcgctggaggatgaaggaacctatagcattgaggtt
ggagagcacacgtcaacagccaagctactggtagaagcccagtctatccaagtgaaaaag
aatctagaagatgtggaggtacgggctcctgaaccagcttgctttcaatgtgaagtatct
gtgacactcgtcaagccccccatctggactttgaaaggggagaccctgcagtcgggacct
gatgtgcgaatagaaaaccgaggaagtgtccacaagctgacgttcagaaaaaccagctgt
gacatgagcgggatagtccagtttaacacagggaaagccaaaagcagtgcgaaactcaca
gtgctgaactga
DBGET
integrated database retrieval system
