Triplophysa rosa: 130557188
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Entry
130557188 CDS
T09216
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130557188 (ddx17)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130557188 (ddx17)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130557188 (ddx17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130557188
NCBI-ProteinID:
XP_057194777
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Position
LG7:complement(19636667..19655889)
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AA seq
653 aa
AA seq
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MRGRSSYGERDCGRDRGPRFGSTRTVPPPPKKFGNPGDRLRRKKWDLDQLPKFEKNFYSE
HPEVHCMSQYDVEEFRKRKEITVRGNGCPKPVTSFHQAQFPQYVMDVLLQQNFKEPTAIQ
AQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQ
QVQQVAYEYGKTSQIKSTCVYGGAPRGPQIRDLERGVEICIATPGRLIDFLEAGKTSLRR
CTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRDYVQIN
IGALELSANHNILQIVDVCMENEKDTKLLQLMEEIMAEKENKTIIFVETKKRCDELTRRM
RRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVAARGLDVEDVKFVINYDYPNS
SENYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDTSRGS
GGGRTRYRNSSSNNPNLMYQDECDRRLRPAPNCNKESRKNSFGHVGWSGGSGRNDRSLSY
RDHSRDGRNNYNSGTSYNAGGDHYQGYSGEGQYDSRGGSSQSGGPSSGRGQDKPGPPQGP
FVQSPPTTPQPGPGPQPLMAQQFPPLPQPMMGFTGPGQYPFAHPPPPSSNVQK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaaggtcttcatatggagagagagactgcggacgggacagagggcctcgcttt
ggttccacccgaactgttccaccgcctcccaagaagtttgggaatcctggagaccggcta
agaagaaagaaatgggacctggaccagctgcccaagtttgagaagaacttctacagtgaa
cacccagaagttcattgcatgagtcagtatgatgttgaagaatttcgcaagaggaaagag
atcacagtcagaggcaatggctgcccaaagcccgtcaccagcttccatcaagctcagttc
cctcaatatgtcatggacgtactgttgcagcagaattttaaggagccgactgctatccag
gctcaaggttttcctctagctctcagtggcagagacatggtgggcattgctcaaaccggc
tctggaaaaacactggcttatctccttcctgccatagtacacattaaccatcaaccctac
ctggagagaggcgatggtcccatttgtcttgtgctggcacccacacgtgaattggcccag
caggtgcaacaggtggcttatgaatatggcaaaacatctcagatcaaaagcacctgtgta
tatggtggagccccaaggggtccacagatcagagatttagagagaggtgttgaaatttgc
atagccacacctggtcgtttgatcgacttcctggaggcaggaaaaactagcctgcgtcgt
tgcacgtacctggtcctggatgaggctgatcgtatgttggacatgggatttgaacctcaa
attcgcaaaatagttgaacaaatcagacctgacagacagacattgatgtggagtgctacc
tggcctaaagaggtgcgtcagttggctgaagattttcttcgcgactatgtccagattaac
ataggagctctagaactgagcgcaaaccacaacatcctgcagatagtggacgtctgcatg
gaaaatgaaaaagataccaagttgttgcagctaatggaggaaatcatggctgaaaaagag
aataaaaccataatttttgttgagacgaaaaaacgttgtgatgaactaactcgcaggatg
cgaagagatgggtggcctgcaatgtgcattcatggtgacaagagccagccagagagagac
tgggtactatcagagttccgcagtggaaaagcgcctattctgatcgcaactgatgttgcc
gcacggggactggatgtggaggatgtcaagtttgtcatcaactatgactatccaaattca
tcagagaattacgttcatcgcattgggcgcactgcccgcagtactaacaaaggcacagcc
tacacctttttcacgcctggaaacctgcggcaggctcgagacctggtgcgggttctagag
gaggccaggcaagccatcaaccccaaactactgcagctggtggacacgagccgtgggagt
ggaggtggacggacacgttaccgcaactcaagctcaaacaaccccaacttaatgtaccag
gatgaatgcgatcgtcgcttgcgccctgcacccaattgcaacaaggaaagccgcaaaaat
agcttcggccacgttgggtggtcaggtggaagcggacgcaatgaccgctcattgtcttac
agagatcacagcagagatgggcgaaacaactacaactcaggaacttcctacaacgcagga
ggtgaccactaccagggctacagtggagaggggcagtatgactccagagggggcagctcc
cagtcaggtgggcctagtagcggaagagggcaagataaacctggaccccctcagggaccg
tttgtacagtctcctccaaccactcctcagcctggaccaggtccacaaccactcatggca
cagcagttccctcctctgccacaacccatgatgggcttcactggcccagggcaatatcca
tttgcccacccaccacccccatcttccaatgtccaaaaataa
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