Triplophysa rosa: 130557255
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Entry
130557255 CDS
T09216
Symbol
cntn4
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130557255 (cntn4)
Cell adhesion molecules [BR:
tros04515
]
Immunoglobulin superfamily
Contactins
130557255 (cntn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_C17orf99
Sp38
C2-set_2
Ig_5
Tissue_fac
Pur_ac_phosph_N
Ig_6
NDNF
Motif
Other DBs
NCBI-GeneID:
130557255
NCBI-ProteinID:
XP_057194879
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All DBs
Position
LG7:complement(5253754..5386979)
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AA seq
1040 aa
AA seq
DB search
MRVDFDRTKLKMKLLWKLLLLQSFMGCLAAGNTLQSPVFTKQPGSIVFPVDSMEKNKEVV
FSCEAQGHPPPFYRWKLNGTLINPKPGSHHSLSGGNLRISHLNKDEDAGTYQCLASNSFG
TIVSREASLTFAYLENFKTHRRSSVSVREGQGVVLLCGPPPHSGALTFSWIFNEYPSFVK
QDSRRFVSQETGNLYIAKVAPSDVGNYTCVVTNTVTKTRVQGPPTPLILRTDGVMGEYEP
KIEVQFPEVVQVAKGSTVRLECFALGNPVPSISWRRVDGVPFSRKVDVRKTSGVMEIPYF
QQEDSGTYECVAENTKGRNSVQGKLSFFAAPQLIEKPQDVQKAIEDSLVWECKATGKPKP
SFRWMRNGENLEPTEERVQVINGALSITRLALSDIGMYQCVAGNKYGEVYSNTELRVIAV
APDFSQNLLKSHTLVKEGGDVLIECKPKMSPRGAISWRKGNDALRESSRVAILETGALRI
SNVTKADAGTYTCVARNQFGVASSSGNLLVKEPTIITTTPSTLDVTVGESIILPCQVSYD
PSLELKFTWFFNEQLIHFGSHGGYFEKVGGQHSAGDIMIRNIQLSHAGKYTCAVQTKVDS
SSIATDLIVRGPPGPPTSIHVEEITDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQA
VSTVPEVVVGSHLTATVIELNPWVEYEFRVLASNAVGTGEPSKPSKKARTKETLPKITPA
NVSGGGGSRSELVITWEPVPEELQNGAGFGYVVAFRPFGATGWMQAAVPSAEASKYVFKN
ETILPFSPFQVKVGVYNNKGEGPFGPVVTIYSAEEEPGRAPSRVRAKSLSAFDVEVSWKA
LPWSTSKKRVLGYELRYWEKNEKEDTASVLRTVGNRTLTIIQGLKGSSTYYITVRAYNTA
GTGPPSQPVNVTTKKPPPSQPPSKVMWNTSNSKIILNWEQVKPLENESEVMGYKVLYKRN
RFSRPSVMETNTTSVELSLPTDEEYIIQIKPFGEGGEGSSSRQITIPRISGPNAVGSASS
VSTLSALSTIALSLTARTSL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttgactttgaccgaaccaaactgaagatgaagttgctatggaaactgctgctg
ctgcagtcattcatggggtgcctcgcagcaggcaacactctgcagagccccgtgtttacg
aagcaaccgggcagcatcgtgtttccagtagactccatggagaagaacaaggaggtggtt
ttcagctgtgaagctcaaggtcatccgcctcctttttacaggtggaaacttaatggaacc
ttgatcaaccctaaacctggatctcaccacagcctctctggaggcaaccttcgcatttcc
catctcaacaaagatgaggacgctgggacctaccagtgcctcgcatccaactccttcggg
actatcgtcagcagggaggccagtctaacctttgcatacttggaaaacttcaagacccac
aggcggagttctgtgtctgtcagggaagggcagggggtggtgcttctctgcggcccgccc
cctcactcgggagctctcacgttctcttggatttttaacgaatacccgtccttcgtgaag
caggactcccgtcgattcgtgtcccaggagacggggaatctatacatcgctaaagtcgca
ccatccgacgtgggcaactacacctgcgtcgtgaccaacaccgtcaccaagacacgtgtc
caaggcccgcccactcctctcattttgcgcactgacggtgtcatgggagaatatgaacca
aagattgaagtgcagtttccagaagttgttcaggtggccaaaggttcgacggttcgacta
gaatgttttgcattggggaatccggtaccttccataagctggcgccgagtggacggagtc
ccgttctcccgcaaagtggacgtgagaaaaaccagtggcgtcatggaaatcccatacttc
cagcaagaggattcgggcacgtacgagtgtgtcgcggaaaacacaaaaggtcgaaattct
gtgcaaggaaagctgtctttctttgctgctccccagctaattgaaaagccccaggatgtg
cagaaggccatcgaagactctttggtgtgggaatgcaaggccacggggaaacctaaaccc
tcctttagatggatgaggaacggagagaacctggagcccactgaggagagggtccaggtc
attaatggagccttgtccatcacccgcttggcgctgtcggatattggaatgtaccaatgc
gtggctggaaacaagtacggcgaggtttattccaacactgagctcagagttatcgctgtc
gccccagatttctctcagaacctgctgaagagccacactctggtgaaagagggcggcgat
gttctgattgaatgcaagcccaagatgtctccgcgtggagcgatctcctggcgcaaaggc
aacgacgccctccgagaaagcagcagagttgctattttggaaaccggagcccttcgaata
tccaacgtcaccaaagcagatgctgggacgtatacgtgtgttgcccgtaaccagtttgga
gtggcgagcagctcaggaaacctgcttgttaaagaaccaacgatcataacaaccaccccc
tccacgctggatgtgactgtgggcgagagcattattctaccctgtcaggtgtcgtacgac
ccctcactggagctcaagtttacctggttcttcaacgagcagctcattcactttggcagc
catggaggatactttgaaaaagtcggaggacagcactcggcaggtgacatcatgatccga
aacattcagctaagccatgctggcaaatacacgtgtgctgtgcagaccaaggtggacagc
agctctattgcaactgacctgattgttagaggtccccccggcccccctaccagcatccat
gtggaagaaatcacagataccactgctactctctcctggaggcctggtcctgataatcac
agtccaattactgcctacaccatccaggctagaacccctttctccctgggttggcaagct
gttagcacagtgccggaggttgtggtgggctcgcatctgactgcaacagtaatcgagctc
aacccctgggtggagtacgagttcagagtgttggcaagcaatgcggtgggcacgggggag
cccagcaaaccctcaaagaaagcaaggacgaaagaaactcttcccaagatcaccccagcc
aatgtgagtggaggaggtggcagtcgatcagaattagtcatcacttgggagcccgttcct
gaggagctccagaacggagcgggattcggctacgttgttgctttcaggccctttggcgcc
accgggtggatgcaagcggccgttccatctgccgaagcctccaaatacgtcttcaagaac
gagaccatcttacccttttccccctttcaagtcaaagtgggggtttacaataacaagggg
gaaggacctttcggacccgtggtcaccatttattccgctgaggaggagcccggaagagca
ccttcccgagtcagagccaaaagtctttcggcgtttgatgtggaggtgtcttggaaagct
cttccttggagcaccagcaagaaacgtgttctgggatatgagttaagatactgggagaag
aatgagaaagaagatacagctagtgtactcagaacagtaggaaatcggacactgacgatt
attcaaggcctgaagggcagcagtacctattatataactgtacgggcctataacactgca
ggtacaggaccaccaagccagccggtcaacgtcaccaccaaaaagcctccacccagccaa
cctccttcaaaagtgatgtggaatacgtcaaactccaaaattattctaaactgggaacaa
gtgaaacctctagaaaatgagtctgaggtcatggggtataaggtcctgtacaagcgcaac
agattcagcaggcctagcgtcatggagaccaacaccacgtctgtggagctctccctgccc
acagatgaggaatacatcatccagatcaaaccatttggggaaggtggggagggcagcagc
agccggcagatcaccattcccagaatatcaggtcccaatgctgtcggctctgcgtccagc
gtgtccactctctcagccctcagcacaatagctctatccctcacagcccggacatcttta
tga
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