KEGG   Triplophysa rosa: 130557269
Entry
130557269         CDS       T09216                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
tros  Triplophysa rosa
Pathway
tros03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    130557269 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tros03019]
    130557269 (wdr82)
   03036 Chromosome and associated proteins [BR:tros03036]
    130557269 (wdr82)
Messenger RNA biogenesis [BR:tros03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     130557269 (wdr82)
Chromosome and associated proteins [BR:tros03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     130557269 (wdr82)
    COMPASS/SET1 complex (yeast)
     130557269 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WD_LRWD1 VPS8_N PQQ_2 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 130557269
NCBI-ProteinID: XP_057194900
LinkDB
Position
LG7:complement(7113470..7117312)
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKG
LVLEASFTPDSQFAMIGSEDGKIHMWNAESGLKVAVLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaaactcacagacaatgtgttgcggagtttcagggttgcaaaggttttccgggagaat
tccgacaaaattaactgctttgactttagttcaaacggcgagacggttatatcgagtagc
gacgacgactcgattgtcttgtacgactgtcaggaaggaaaaccaaaacggaccctctac
agtaagaagtatggtgtggatcttatccgatatactcacgctgccaacactgtcgtctac
agctccaataaaattgatgatactatacgatacctttctctgcatgacaataagtacatt
cgctactttcccggacacaataagagggttgttgcgctgtctatgtctcctgttgatgac
acgttcatatctggctcacttgataaaactattcgcctgtgggatctgcgctcaccaaat
tgtcagggcctcatgcatctccaagggaagccagtttgctcattcgatcccgaagggttg
atttttgctgcaggggttaattctgagatggtcaaactttatgatctacgctcctttgat
aagggcccatttgccacatttaaactacagtacgagcgcacatgcgagtggacgggtctc
aagtttagcaacgacggaaagctcatattagtctccacaaacggaggaacgctccgagtg
ctggatgccttcaaaggagccgttctccactcatttgggggctataataacagcaaaggc
ttggttttagaggcctcgttcacaccagattcccagttcgctatgatcgggtcagaggac
gggaagatccatatgtggaatgccgagagcgggttgaaagtagcagttcttgatgggaag
cacactggtcccgtgacctgtttacagtttaaccctaaattcatgacctttgccagcgct
tgttctaacatggcattctggttacccacgatcgatgactaa

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