KEGG   Triplophysa rosa: 130557502
Entry
130557502         CDS       T09216                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
tros  Triplophysa rosa
Pathway
tros03013  Nucleocytoplasmic transport
tros03015  mRNA surveillance pathway
tros03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130557502 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    130557502 (rbm8a)
   03015 mRNA surveillance pathway
    130557502 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tros03019]
    130557502 (rbm8a)
   03041 Spliceosome [BR:tros03041]
    130557502 (rbm8a)
Messenger RNA biogenesis [BR:tros03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     130557502 (rbm8a)
Spliceosome [BR:tros03041]
 Complex C
  Other components
   EJC/TREX
    130557502 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 130557502
NCBI-ProteinID: XP_057195279
LinkDB
Position
LG8:complement(3460290..3464960)
AA seq 185 aa
MRGPAHSLAGIMADVLDLHEAGGEDFPMDEDGDASIHKLKEKAKRRKGRGFGSEEGARSR
AREDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDKFAEFGEIKNVHLNLDRR
TGYLKGYALVEYETYKEAQAAMEGLNGQDLMGQPISVDWGFVRGPPKSKRRGGRRRSRSP
DRRRR
NT seq 558 nt   +upstreamnt  +downstreamnt
atgcgcggaccagcacactcactcgcaggcatcatggcggacgtgttggatcttcatgaa
gcgggaggcgaagactttcctatggatgaggatggtgacgcaagcattcacaagctgaaa
gagaaagccaagaggagaaagggtcgtggatttggatcagaggagggagcaagatctaga
gccagagaggactatgatacagtagaacaggatggagatgaacctggcccacagagatct
gttgaaggatggattctcttcgtgactggtgtacatgaggaggcgactgaagaggacgtc
catgacaaatttgcagagtttggagaaatcaaaaacgtgcatctcaatttggacaggaga
acaggttaccttaagggctatgcgctggttgagtatgagacatacaaagaggcccaggca
gcaatggaagggctaaatggccaagaccttatggggcaaccaatcagtgttgactggggc
tttgtaaggggacccccgaagagcaagaggcggggcggaaggcggcgcagcaggagccct
gacagacggagacgttga

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