Triplophysa rosa: 130557528
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Entry
130557528 CDS
T09216
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130557528 (lingo4b)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130557528 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
V-set
LRR_Zer-1
LRR_EndoS
C2-set_3
C2-set_2
Ig_C17orf99
LRR_9
Motif
Other DBs
NCBI-GeneID:
130557528
NCBI-ProteinID:
XP_057195319
LinkDB
All DBs
Position
LG8:complement(22055067..22067970)
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AA seq
605 aa
AA seq
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MLMEQCGMWGGWTVLLLWSLNLSAADFTCPQKCVCYPDTLEVNCSSKQLTGVPDGLPNNV
KRLDLSGNQLKTIARRQFSGLSKLEDLNLSENIISMIEVEAFQGLKNLRYLRIKNNRLKI
LPVGVFSGLTNLRRLDISENEILVFLDFTFRDMVNLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQCLTKLRLRKLTIGVLPNNAFRGLNQLRTLQILHWPSLE
TLNSNSLVGLNLTTLTLTNCNLSAVPYASLRHLVYLQYLDLSYNPIISIQSNLLGELVRL
QELHLVGGNLLRIEPGAFRGLVHFRLLNVSSNRLSTLEESVFHSVGILQTLRLDRNPLTC
DCRLLWVVRRRRRLDFDGRQPTCSVPNQVYRKAIRDFSEAELPVIFVCRQAQILNRQLQD
ASVVEGTNVQFECKADGYPSPSVTWLSAQQTVLSSVGRIRALANGSLEVRYAQVQDSGTY
LCTAANAAGNDSITVSLQVEGLPQNRTASYFSDVRWTETSLPPSTNSSARASSRYPFDAK
TLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMAGGGDGGDTGRF
TMKLI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggaacagtgtggcatgtggggtggatggacagtcctgctgttgtggtcctta
aacctttcagcagccgacttcacctgtccgcagaaatgcgtttgttaccctgacacgctg
gaggtcaattgctcctcaaaacaactgacaggtgttcccgatggcctgcctaataacgta
aaacgtctagacctttctggaaaccaactgaaaacgatagccaggcggcagttctccggc
ttgtcaaagttggaggacctgaacctgagtgagaacataatatctatgattgaggtggaa
gcgtttcagggactaaagaatctaagatacttgagaattaagaacaaccgtctcaagatc
ctcccagtcggggtcttctctggcctcaccaaccttcgccgtctagatatcagtgagaat
gagatcctagtgtttttggatttcaccttcagggacatggttaacttacaacagcttgat
gctggagagaacgacctggtgttcatctcacaacgggcgtttgttgggttgcaggccctg
aaagagcttaacgtggaccgtagcaatctgacctctatccccacagaggctctctcccaa
ctgcagtgcctgaccaaactgcgcctgcgcaaactgaccatcggtgtcctacctaataac
gcctttcgtgggctgaaccagcttcgtaccctgcagatccttcactggccttctctcgag
acgctcaacagtaacagcctggtgggcctcaaccttacaactttaactttgaccaactgc
aatctcagcgctgtaccctatgcttcccttcgccatctggtctatttgcaatacctggac
ctgtcctacaaccccatcatctccatacagagtaacctgctgggggagcttgtccgactg
caagagttgcacctggtaggtgggaaccttctacgcatcgaaccaggtgccttcaggggt
ctggtccactttcgcctgctcaacgtgtcttctaaccgtctgtctaccctggaagaaagt
gtcttccactctgtgggcatcttgcaaacattacggcttgaccgaaacccattgacttgt
gactgcaggctactctgggtggtgcgccgtaggcggcggctggacttcgatggtcgccaa
cccacctgttcggttcctaatcaggtgtacaggaaggcaatcagagacttttcagaagcc
gaactcccggttatatttgtgtgcagacaggcacagattttgaaccgacagctgcaggat
gcaagcgtggtggaaggcacgaacgtacagtttgagtgcaaagcagatggctatccatca
ccttcggtaacctggctgtcagcccagcagactgtgcttagctctgtcgggagaatacga
gcgctcgctaatgggagccttgaggtgcggtacgctcaagtacaagacagcggaacgtat
ctgtgtaccgcagctaatgcagccggtaacgacagcatcaccgtgagccttcaagtggaa
ggtcttccgcaaaaccgcacggcgtcgtatttctcagacgtgagatggacggaaacttca
ttacctccctccaccaactcctccgcgcgagcatcgagccgttatcccttcgatgcgaaa
acccttatcatcgccaccaccatgggctttctgtcttttctcagctccgtggcaatttgt
ttcgtgtttatgttcttctggagtcagagcaaaggtcagatcaaacacactgccactata
gactttgtgccacggtcgtccatggctggaggtggagatggtggagatacaggaaggttt
acaatgaagctgatttga
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