Triplophysa rosa: 130558171
Help
Entry
130558171 CDS
T09216
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130558171 (rnf115a)
04121 Ubiquitin system [BR:
tros04121
]
130558171 (rnf115a)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130558171 (rnf115a)
Membrane trafficking [BR:
tros04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130558171 (rnf115a)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130558171 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
C1_2
zf-RING-like
zf-RING_6
Rad50_zn_hook
HypA
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
130558171
NCBI-ProteinID:
XP_057196427
LinkDB
All DBs
Position
LG8:17477502..17482719
Genome browser
AA seq
311 aa
AA seq
DB search
MAEAAAIPPHRFFCHCCRGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSSSNNFDDTAS
HFAELWQLLFVERPSFSLDLESPDSERIPGGGSGSGSLGAGSLGRIVPGGLGGPLGDPLG
GGENWGPGRPPRLHSQRRFRSRGTSRPDRSPAIEGIVQQFLAGLFANSGVPGSPPLSWTG
MLHSNPGDYAWGQGGLDAVITQLLGQIENTGPPPAEKEKISSLPTIIITQEQADCNMECP
VCKEDYTVGEPVRQLPCNHIFHSDCIVPWLEMHDTCPVCRKSLNEDENDTQSPSEPSSLN
TDPRTPERWSF
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcgattcctccgcatcgcttcttctgtcactgttgtaggggtgaa
gtaagccccaaactgccggagtatatatgtcccagatgtgactcgggcttcatcgaggag
gttacagaagactcaagtctgctggacagtagttcaaataacttcgatgacacggcttca
cattttgctgagctatggcagttgttgtttgtggagaggccttcgttcagtctagatcta
gaaagtcctgactcagagcggatcccgggaggtggtagtggctctgggagtcttggagcg
gggtcattaggccgtatcgtgccaggtgggcttggtgggcccctgggggaccctttaggt
ggaggggaaaactggggtcctggtcgtcctccacgcctgcacagtcaaaggaggttccga
tccagagggaccagtcgaccggatcgctctcctgccattgagggaatagtacagcagttt
ctcgctggtctttttgccaattcaggagtaccaggatctcctccactgtcatggacaggc
atgttgcactcaaacccaggggactacgcctggggacaggggggtctggatgcagtcatc
acacagttattgggtcagattgagaacacaggtccccctcctgctgagaaagagaaaatt
tcctcccttcccaccatcatcatcactcaggaacaggctgactgcaatatggagtgccct
gtatgtaaggaagactacacggtcggcgagccagtcaggcagctgccctgtaaccacatc
ttccatagcgactgcatcgtgccctggcttgaaatgcacgacacgtgtcctgtgtgcagg
aagagcctgaatgaagatgaaaacgacactcagtccccatcagagccttcctctctaaac
actgatccccgcacaccagagagatggtccttctga
DBGET
integrated database retrieval system
