Triplophysa rosa: 130558315
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Entry
130558315 CDS
T09216
Name
(RefSeq) LIM domain-containing protein 1-like isoform X1
KO
K16682
LIM domain-containing protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130558315
03036 Chromosome and associated proteins [BR:
tros03036
]
130558315
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130558315
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
130558315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Tal_Pri
Motif
Other DBs
NCBI-GeneID:
130558315
NCBI-ProteinID:
XP_057196650
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Position
LG8:complement(9736818..9769390)
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AA seq
559 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASRDGLFRVRRDAENNPDFEETRKVFASKMAKIHMQKQ
QEEMAKNSLAARLNGSHAKVSENTKDRPPISNVSFRQGSVSEAAAKPPIMSGPMTVNASV
NPYIFHEGQKHNPVSLHDGASTRGYVNSYDTKETGNAYNPIPVSARAAASTSPPGTWKAG
NTSQTPSSPPASSSVTLNPQSFAKSVKSLSQSPTGTYRAPGDTHNQPQQTSPGHCQPVSA
QWSASGPTQNGVPHNTGMSTPSPAQVTPPSLFPVGKQAETPQLKNIAPTSSSPVVSALDD
CSSPSRALKLPCQSLHVQADQGPSVAEIKLEALTERLEKEMDVLPNAEHFGSCVKCNKAV
YGANQACQAMGSLYHDSCFTCSACSRKLRGKAFYYVCGKVFCEEDFLYSGFQQSADKCNV
CGHLIMDMILQALGKSYHPGCFRCAICNDSLDGVPFTVDTENKIYCVKDYHRVLAPKCAA
CNQPILPSEGSDETIRVVSMDKDYHVECYHCEDCHMELNDEEGHRCYPLDGHLLCHACHL
KHVKPVSTQSAANNYHSQF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgatgatttgggacttgaggcgagtaaattcatcgaggatttaaacatg
tatgaagcgtcgagggacggcttgtttcgcgtgaggagagatgcggaaaataaccccgat
ttcgaggaaaccaggaaagtttttgcctctaaaatggctaaaatacacatgcaaaagcag
caagaggagatggcaaagaacagtttggcagcaaggctcaatggaagtcatgcgaaagtg
tcggaaaacaccaaagacagaccacccatcagtaacgttagttttagacagggcagtgtc
agtgaagcagcagccaaaccacccatcatgtctggacccatgactgtcaatgccagtgtg
aatccatatatctttcatgaaggacagaaacataatccggtcagtctacatgatggagcc
agcacgaggggttatgtgaacagttatgacactaaggagactgggaatgcttataaccca
ataccagtgtcagctcgggcagccgcctctaccagccctcctggcacatggaaggctggt
aacacttctcagactccatcatcccctcctgccagcagttcagtgactctgaatcctcaa
tcctttgccaaatctgtaaagtctctttcccagtcacccacgggaacctacagggctcca
ggagacacacataatcagcctcaacaaaccagccctggtcattgccagcccgtctctgct
cagtggtctgccagtggaccgactcagaatggggtaccccataacactggcatgtcaaca
ccctcacctgcccaggtgaccccaccttcactgttccctgtggggaagcaagctgagaca
ccccaactcaagaacattgctcccacgtcgtcttctcctgtagtgtctgcccttgatgac
tgctctagcccctctcgggcactcaaactgccatgccagagcctccatgtacaagcagat
caggggccatctgtggctgaaataaaattagaagctctgactgaacgcctggaaaaggag
atggacgttctgccaaatgctgagcactttgggagttgtgtgaagtgcaataaagccgtt
tatggagccaatcaggcatgtcaggccatgggcagcttgtaccatgacagttgcttcacc
tgtagcgcttgcagtcgaaagctgcggggaaaagctttttactatgtctgtggaaaagtg
ttttgtgaagaggacttcctgtattctgggttccagcagtctgctgataaatgtaacgtg
tgtggacatttaatcatggatatgatccttcaggcgctggggaagtcttaccacccaggc
tgcttccgctgcgccatctgtaatgacagtttggatggagtgccttttactgtagacaca
gagaacaagatctactgtgtgaaagactaccacagagttcttgcaccgaaatgtgcagca
tgtaatcagccaattctgccctctgagggatcagatgaaaccattagagtagtctcaatg
gacaaggactatcacgtggagtgctatcattgcgaggactgtcatatggagttgaatgat
gaggagggccaccgctgctatcctttggatggacacttgctctgtcacgcgtgtcacctt
aaacatgtgaagcctgtttccactcagtctgcagcgaacaactaccacagtcagttttaa
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