Triplophysa rosa: 130558500
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Entry
130558500 CDS
T09216
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
tros
Triplophysa rosa
Pathway
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130558500 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Sharpin_PH
Motif
Other DBs
NCBI-GeneID:
130558500
NCBI-ProteinID:
XP_057196926
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Position
LG8:17196525..17217513
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AA seq
512 aa
AA seq
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MAVASAVCGNRAQRSACVEVLVRERWHAVFASLSDESLTLSCEEPAGEPAVNLNGITTNG
SYDHPDSPRTPYADSQVPEAIANRKRCVKVTKQEVGGLGISIKGGKENKMPILISKIFKG
LAADQTQALYVGDAILSVNAINLRDATHDEAVQVLKKAGREVVLEVKYMREATPYVKKGS
PVSEIGWETPPPESPRLGSPHSDIPNPLSLSIHGDRRYIPLKMCYITRSMTVPDPENRQL
ELHSPDAKHTVVMRFKDTSSTQTWFTLMQSTITNLTSKVIGEVGEHVGRHGIAGSREIRH
LGWLAEKSESERQRWKQVLVVLTEKDLLLFDSMPRMREHWLSPTHAYPLLATRLVHSGPD
KGSPQPGGELSFATRTGTRLGIEAHLFRAETCKDLSLWTRHIVSGCHASAEMIKEVTTSC
MYQGQDCRLVIHYERGFSVIADRDESSLAQPLFSYPFEKLKMSADDGVRILYLDFGGNEG
EIQLDLHSCPKPIVFILHSFLSAKIARLGLVA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcatcggcggtttgcgggaacagagcgcagaggagcgcgtgtgtggaggtg
ctggtgcgggagcgatggcacgcggtgttcgcgagtttaagcgacgagtctctgacgctc
agctgcgaggagcccgccggagagcccgccgttaacctgaacggcatcaccactaacggc
tcttacgatcacccggacagtcccaggactccatacgcggattcacaagtgcccgaagcg
atcgcgaaccgaaaaagatgcgtcaaagtgaccaaacaggaggtcggaggactgggcatc
agcattaaaggtgggaaggagaataagatgcccattcttattagtaaaatcttcaagggt
ctggctgcggatcaaacgcaagcgctttacgtcggagacgcgatcctgtccgtgaacgcg
atcaatctgcgtgacgctacgcacgacgaggcggtgcaggtgctgaagaaagcaggcaga
gaagttgtgctggaagtgaagtatatgcgggaagccaccccatatgtgaaaaaagggtca
ccggtgtctgagatcggctgggagacccctccacccgagtctccacgtcttggcagccct
cactctgatattcccaaccccctctcgctatcgatacatggcgaccgccgatacatcccc
ctcaaaatgtgctacatcacccgcagcatgaccgtccctgacccagaaaacagacagctg
gagctgcactcccctgatgccaagcacacagttgtcatgcgttttaaagacacgtcttca
acccagacctggtttactctgatgcagtccaccatcacaaacctcaccagcaaagtcatc
ggagaagtcggagaacacgtgggtcgccacggcattgccggcagccgagagatccggcac
ctcggttggctggcggaaaagtctgaaagcgagaggcagcgctggaagcaggtgctggtt
gtgttgacggagaaagacctgcttttgtttgacagtatgccacggatgagagagcactgg
ctcagccccacacacgcctaccctctgctcgccacacggctggttcactctggcccagat
aaaggttcaccacagcctggcggcgagttatcctttgccacacggactggaaccagattg
ggtatcgaagcccacctcttcagggcggagacctgcaaggatctgtcactatggaccaga
cacatagtcagtggctgccatgcatctgctgagatgatcaaagaggtcactaccagttgt
atgtatcaaggtcaggactgtcggctggttattcactatgaacgggggttttcagtaata
gctgatagagatgaaagctctctggctcaaccactgtttagctacccctttgaaaagctg
aagatgtctgccgacgatggcgtgcgtatcctgtatttggatttcgggggaaacgaaggg
gaaattcaactggacctgcactcctgtcccaaacctattgtctttatcctccactccttc
ctgtctgccaagattgcacggcttggattggtagcttga
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