Triplophysa rosa: 130558916
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Entry
130558916 CDS
T09216
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
tros
Triplophysa rosa
Pathway
tros04080
Neuroactive ligand-receptor interaction
tros04082
Neuroactive ligand signaling
tros04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130558916
04082 Neuroactive ligand signaling
130558916
04519 Cadherin signaling
130558916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130558916
Ion channels [BR:
tros04040
]
Ligand-gated channels
GABA-A
130558916
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Ortholog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BBL5
Motif
Other DBs
NCBI-GeneID:
130558916
NCBI-ProteinID:
XP_057197626
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All DBs
Position
LG9:27010818..27058578
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AA seq
475 aa
AA seq
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MGTNYMAKTSPDRRSHPLNMTIFSSLFVLLFISRILENSLLSAEVKEGEILPPTIQKLMK
GYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLS
LDGRLVELLWVPDTFIVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTK
YPMDKQTCTLQLESWGYNVNDVMFYWARGNESVSGLDTLQLAQYTVEDHYTSASEAVYET
GNYPKLAFHFELKRSILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMT
TLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALIEYAVAHFCTLHHPDCNGALMYGHH
MHDCEEEMNGMVTTIASNSSRLKRRKDATDASTGAGGDPGLTPSGPSAGEATPPEVPSEP
LNCCSKNISLLRKIVTSTNCCHVKNPHYIDNYSRLSFPLSFVMVNVLYWTYYLYF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccaattacatggcaaagacctcaccagaccgacgctctcatcctctcaacatg
accatcttcagctctttatttgttcttctcttcatcagcaggattctggaaaactctctg
ctgagcgctgaagtgaaagagggagagattcttcctcccaccatccagaagctcatgaaa
ggatacaacaaatacctcaggccgttctttgacaatggcccagtaacggtgggcatgagt
ctggacatcgctagcattgacacaatatcagagatcaacatggactacacggccacgatc
ttcctgcgacagcgctggacggatgagaggctggtgtttgagggtaacaagagtttaagt
ctggacggtcgactggtggagctgctgtgggtaccagacaccttcatagtggattcaaag
aaatccttcctccatgacatcactgtggaaaatcgactgatccggatctttcccaacgga
acggttctttatgcccttcggatcacgacaacagtggcctgtaacatggacctgaccaaa
tatcccatggacaaacagacctgcaccctacaactggagagctggggttataatgtcaat
gacgtgatgttttactgggcacgtgggaatgagtctgtgagcggtctggacaccctgcaa
ctggcccagtatactgttgaagatcattacacgtctgcctccgaggctgtgtatgagacg
ggaaactatcctaaactggcgtttcattttgagctgaagagaagcatcttgtacttcatt
ctggaaacgtacgtgccctccagcctgttggtggttttgtcctgggtctctttctggatc
agccaatcatctgtccccgcacgcatctgcatcggagtgaccactgtcctgacgatgacc
acgctgatgatgggtgccaggacgtctctgcccaacgctaactgcttcatcaaggctata
gacgtgtatctgggcatctgcttcagcttcatctttggagcgctaatagagtatgcagtc
gctcacttctgcacgctgcaccaccccgactgtaacggtgcactcatgtacggtcaccac
atgcacgactgcgaggaggagatgaacggaatggtcaccaccatcgccagcaattcctcg
cggctcaagagacgcaaagacgccacagatgcgagcacgggcgctggtggagatcccggt
ctcacaccctccggtccgtctgccggtgaagccacgcccccggaggtcccatcagagccc
ttaaactgctgctccaaaaacatttcactgctgcgcaagattgtgacgtcgaccaactgc
tgtcatgtgaagaatccgcattatatagacaactactcacggttatccttcccgctgtcc
ttcgtcatggttaatgtgctctactggacatactacctgtacttctaa
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