Triplophysa rosa: 130559009
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Entry
130559009 CDS
T09216
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130559009 (lingo2b)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130559009 (lingo2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
ig
LRR_5
Ig_2
LRR_9
V-set
LRRNT
Ig_C17orf99
LRR_LRWD1
Ig_6
Herpes_gE
C2-set_2
LRRCT
Motif
Other DBs
NCBI-GeneID:
130559009
NCBI-ProteinID:
XP_057197813
LinkDB
All DBs
Position
LG9:complement(11829574..11847902)
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AA seq
611 aa
AA seq
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MKVAMLFSTFACAVGFSLLSLLLFQSPAHACPARCECSVPTRSVSCHRRRLVQVPEGIPI
ETRALDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPNSFRAQPRLRVLRLRSNQL
TLLPRGALAGLGELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLP
SLRSLTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIAELQAHAFKGLPRLKHLEVDRWPL
LEGFPTSALQGLNLSSLYITHTNLTSVPVVTHLFYLTHLNLSYSRIRVLPAGWLRGMDRL
EVVRVRQANLLIVEPQAFQGASLLRLLDLSYNRLSTLERAVFPASESLQSLLIGQNPLVC
DCRLRWLLDRNPPLLYGEVQPECSSPAPLAGKLLRDLAENLISRYVICTKPRVVSMATYP
AQAEEGQRAWLYCSAEGAPPPSVSWLTPHRRHITTKSTGRVVVHGNGSLEFRMAEPQDSG
MYVCVASNPAGNTTLSVTLAVKTSGIRDRALYANRSFIFDPDYNSSLVNSTEEFTIRMVL
DFTTILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGANSELTET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggccatgctgttctctactttcgcttgtgctgtggggttctccctcctgtca
ctcctcctctttcagagccccgcccatgcctgtcctgcccgctgcgagtgttctgtgccc
acccgttccgtctcatgccatcgcagacggctggtgcaggtccccgagggcatccctata
gagacaagggcgttggacctcagtaaaaaccgtctacggattgtgacgccccaaaacttc
tcctcgctgcttctgctggaggagctggatctcagcaacaacctgttgtcctccgtggag
cctaacagcttccgcgcccagccgcggctacgggtgcttcgactgcgcagcaaccagctg
accctgctgcctcgaggagcgctggccggcctcggtgagctcaccctgctggatgtcagt
cagaaccgccttgttattctgctggactacggcttcgaggagcagcggagactgcgtgtt
ctggagctaagtgataatgagctggtgtttattgccccacgggcgttcagcggcctgcca
tccctgcgctctctgacgctgcagcgctgcaacttgagcacggtgcccacgcacgctctc
gcgcatctgcatggcctgaccagcctgcgtttgcgtgacctgggcatcgccgagcttcag
gcacacgctttcaagggtcttccacgactcaagcatctggaggtggaccgctggcctctg
ttagaagggtttcccacatcagctttgcaggggctgaacctcagctcgctgtatattaca
cacaccaacttgacgtccgtgccggtcgtgacgcacttgttttatctgacgcacctcaat
ctgtcgtacagtcgtatacgggtcctgccagcgggatggttgcggggaatggacaggttg
gaggtcgtacgtgtgcgacaggccaacctgctcatcgtggagcctcaggccttccaagga
gcctccttgctacgacttctcgacctttcgtacaaccgtctctccacgctcgaaagagcc
gtttttcccgcttccgagtcgttgcagagtctcctgattggtcagaatcctttagtgtgc
gactgtcgcctgcgttggctgctagataggaatccacctttgctctatggggaggttcaa
cctgaatgtagttcgcctgcccccctggctgggaaactcctaagggacctggcggaaaat
ctaatctctcgctatgttatctgcaccaagcccagggtcgtctccatggcaacatatccg
gcacaggcggaagaaggacagagagcttggctgtactgcagtgcggagggtgcaccgcct
ccctcggtctcatggctaacaccgcacagacgccacattaccacaaagagtaccggcaga
gttgtcgtccatggcaacggctcacttgagtttcgcatggcagagcctcaggatagcggc
atgtatgtgtgcgtggcatccaacccggccggaaacactactctgtctgtaactctcgct
gtgaaaacttctggaatcagagacagagcgctttatgccaaccgcagcttcatttttgac
cccgactacaacagttctctggttaacagcactgaagagttcaccatcaggatggtgttg
gacttcaccaccatcttggtctccacggcaatgggctgcctcagcttcctgggtgttgtt
ttgttctgtttcctgttgttgttcgcatggagccggggcaaagggaaacacagaggaagc
gtggatattcagtatgttccacggaagaggaaaggagcgaattcggaacttacagaaaca
agcgggcccagacgagtcaacatgaagatgatctaa
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