Triplophysa rosa: 130559177
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Entry
130559177 CDS
T09216
Symbol
vcla
Name
(RefSeq) vinculin a isoform X1
KO
K05700
vinculin
Organism
tros
Triplophysa rosa
Pathway
tros04510
Focal adhesion
tros04520
Adherens junction
tros04810
Regulation of actin cytoskeleton
tros04820
Cytoskeleton in muscle cells
tros05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130559177 (vcla)
04520 Adherens junction
130559177 (vcla)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130559177 (vcla)
04810 Regulation of actin cytoskeleton
130559177 (vcla)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130559177 (vcla)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130559177 (vcla)
04147 Exosome [BR:
tros04147
]
130559177 (vcla)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130559177 (vcla)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130559177 (vcla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
130559177
NCBI-ProteinID:
XP_057198081
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All DBs
Position
LG9:complement(15653483..15686858)
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AA seq
1132 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTSPVAAVQAAVSNLVRVGKE
TVQTTEDKIMKRDMPPAFIKVENASAKLVEAARMLRTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVTSMNTVKELLPVLISAIKIFVTTKCTRSLGVEEALKNRNYTFEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALAVIESKMGQAKGWLRDPNGLPGDPGEHAL
RQILDETGKVGELCAGKERREILGTAKTLGQMTDQVSDVRARGQGATPMGMQKAQQVAHG
LDILVGKVENAARKLEALTNAKQAIAKRIDTAQSWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSISEIAGLTARLVELRRMGKGDTPEARALAKQIGTALQNLQAKTNR
AVANMRPTKAAVTLVGKMEQALRWINNPGVDDRGVGQAAIRGLIAEGRRLANSLPAPYRQ
ELLAKCDRAEQLMMQLADLAARGEGEGPQAGAVATQLLEAIKDLKAKMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPLDAPNRDEVFQERASNFENHANRLGATAEKAAAVGTANKSTVE
GIQAAVKSARDLTPQVTSAARILLKNPGNQAAYEHFETMKNQWIDNIEKMTGLVDEAIDT
KSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPKF
RDLVKVASDELSRTISPMVMAAKAVAGNIQDPGLQKSFLDSGYRILAAVGKVREAFQPQE
PDFPPPPPDLDQLHVHDDQAPPKPPLPEGEVPPPRPPPPEEKDEEFPDQKAGEMVSEPMM
VAARQLHDEARKWSSKPEVTYEGFEAAEADVDIDGDDDEFTDNEDDFEPELLLVASNQPV
NQPILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDI
AKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEE
ESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgccagttttccataccaagacgatagagagtatcctggagccagtggctcagcagata
tcccacttggttatcatgcacgaggagggagaagttgatgggaaagccatcccagatctc
accagccctgtggcggcagtgcaagcggctgtcagcaacctcgtgcgggtggggaaggag
acggtgcagacaacagaagacaagattatgaagagagacatgcccccagccttcattaag
gtggagaatgccagtgccaagctggtagaggctgctcgaatgctgaggacagacccgtat
tctgtccccgcccgggattacctcatcgatgggtcccggggcatcctctcaggcacatca
gacctgctgctgacctttgatgaagcagaggtgcgtaaaattatccgtgtatgtaaaggc
atcctggagtacctgacagtcgcagaggttgtggaaaccatggaggacctggtcacttac
actaaaaacctgggaccaggcatgacgaagatggcaaagatgatcgacgagcggcagcag
gagctgacgcaccaggagcaccgcgtgatgctagtcacctccatgaacacagtgaaggaa
ctgctgcccgtgctcatatcagccattaagatctttgtgacaacaaagtgcacgaggagt
ctcggcgtggaggaggccctgaagaacagaaactacacgtttgagaagatgagcgctgag
atcaatgagatcatcagagttctgcagctcacgtcatgggacgaagatgcctgggctaat
aaaaaggacacagaagccatgaagagagcactggcagtgattgagtcaaagatgggtcag
gctaaaggctggttgagggaccctaatggtctgccaggtgacccaggagagcatgcgcta
cgtcagatactggatgaaacaggaaaagtgggtgaactttgtgctgggaaagagaggaga
gagatcctgggaacagccaagaccctgggccaaatgaccgatcaggtgtcagatgtgcgg
gccagaggtcagggtgccacccccatgggtatgcagaaagctcaacaggtggctcacggt
ctggatattctggtggggaaagtggagaatgctgcccggaagctggaggccctgaccaat
gccaagcaggccatcgccaagagaattgacacagcgcagagctggctggctgaccctaat
ggaggtccggaaggggaggagaacattcgggctcttctggcagaggccaaacgcattgca
gacctgtgcgaagaccctaaagagagagatgacattctgcgctccatcagtgagatcgca
ggactcacagcaagactggttgaacttcgcagaatgggtaaaggagacacccccgaagct
agagcgcttgccaaacagatcggcacagctttgcaaaacctgcaggccaagactaaccgc
gccgtggccaacatgagacccaccaaggctgccgttaccctagtgggcaaaatggagcag
gccctgcgctggatcaacaaccccggcgtggatgatcgtggagtaggccaggctgccatc
cgtgggctgatagcggagggccgtaggctggctaactctctaccagcgccatacagacag
gagctgcttgcaaaatgtgaccgagcggaacagctgatgatgcagttggcagatctggcc
gcgcggggagagggagagggtcctcaggccggcgctgtggccactcagcttctggaagcg
attaaagatctgaaggcaaagatgcaggaggcaatgacccaggaggtgtctgatgtattc
agtgatacaaccactccgatcaagcttctggctgtggcagcgacagcacctcttgacgcc
cccaacagagatgaggtgtttcaagaaagagcctccaactttgagaatcacgccaacaga
ctgggagctacagcggagaaggctgctgctgtgggaacagctaataagagcacagtagaa
ggcatccaggcagccgtgaaatcagccagagatttaacacctcaggtgacttctgctgca
cgcattttgctgaagaaccctggcaaccaggcagcatacgagcactttgagaccatgaag
aatcaatggattgacaacattgagaaaatgactggtcttgtggatgaagccattgacacc
aagtcacttttggatgcttcagaggaagccattaaaaaagacattgataaatgccgggtt
gccatggctaacgttcaaccgcagatgttggttgccggggctaccagcatcgctcggagg
gccaacagagtccttctggtggccaaacgggaggtggagaactctgaggaccctaaattc
agggatctggttaaagtggcttcagatgaacttagtagaacaatctcacccatggttatg
gctgctaaagcggtggcaggaaacattcaagatccaggtttgcaaaagagcttcttggac
tctggctacaggattttggctgctgttgggaaagtgagggaggcctttcagcctcaggag
cccgactttccccctccacctccagacctcgatcagctgcatgtccatgatgatcaggct
cctcccaaaccacccctccctgaaggagaggttcctcccccgagacctccacccccagag
gagaaggatgaggagttccctgatcagaaagctggtgagatggtgagcgagcccatgatg
gtggctgccaggcaactgcacgacgaggcccgcaaatggtccagcaagcctgaggtgaca
tacgaaggttttgaggccgctgaggcggatgtagatatagacggtgatgacgatgagttc
acagacaacgaggatgattttgagcccgagctgcttttagtggcttccaatcagccagtt
aaccagcccattctggccgctgcgcagtctttgcaccaggaggctcgcaagtggtccagt
aagggtaatgacatcatcgctgcagccaagcgcatggccctgctcatggcggagatgtct
cggctggtgcgaggaggaagtgggaataaacgtgcccttattcagtgtgccaaggatatt
gccaaggcttcagatgaggtcacacggctagctaaagaagtggccaagcagtgcacggac
aaaaggattcgcactaaccttttgcaggtttgtgagcgtatcccaactatcagcacccag
ctgaagatcctgtctactgttaaggccactatgctgggacgaacaaacatcagcgaggaa
gagtctgagcaggccaccgagatgcttgtgcacaacgctcagaacctcatgcagtctgtg
aaggaaaccgtgagagaagcagaagcggcttccatcaagatccgcacagatgctgggttt
actctccgctgggtcagaaagaccccctggtaccagtaa
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