Triplophysa rosa: 130559236 Help Entry 130559236         CDS       T09216                                  Symbol cdh23 Name (RefSeq) cadherin-23   KO K06813   cadherin 23 Organism tros  Triplophysa rosa Brite KEGG Orthology (KO) [BR:tros00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tros03037]     130559236 (cdh23)    04515 Cell adhesion molecules [BR:tros04515]     130559236 (cdh23) Cilium and associated proteins [BR:tros03037]  Primary cilia and associated proteins   USH complex and associated proteins    130559236 (cdh23) Cell adhesion molecules [BR:tros04515]  Cadherins   Major cadherins    130559236 (cdh23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Fibulin_C PCDH15_12th DUF5484 Motif Other DBs NCBI-GeneID:  130559236 NCBI-ProteinID:  XP_057198174 LinkDB All DBs Position LG9:23672156..23889908 Genome browser AA seq 3363 aa AA seqDB search MSWCEGFGGKMTPVRLLLSLLLLHTLCEASNQPPRFQNYFFQSYLLIYENTAVGSSITQL QAVDPDGEPLVFGVLGEEAMRYFAVQETTGVVWLRQPLDRETKSEMQVEFFVSDSQGVVK DTVNIQIGDVNDNSPIFHNQPYAVHIPENTAVGTSVFMVNATDPDQGTGGSVLFSFQPPS PFFSIDGARGTVTVTRALDYEVTAAYQLTVNATDQDKRRPLSSLANLAITITDVQDMDPI FTNLPYSTNIVEDAPPGYEVRKIRAIDQDLGRPRGIGYTIVSGNTNSMFALDYISGSLTV SGQLDRENPLYSSGFTLTVKATELNDDRSPSSATVMTAFTILLIDKNDNPPRFNSSEYRV LIPELAQVGFALPLFIQVEDKDEGVNSMFQVVLTGNNSEHFTISPTSVQGRADIRVRVAI PLDYETIRSYSFSLYANESLSEHVGFARVFIDLINENDNRPIFSQTLYNISLPESTAPGT SLLRIQATDNDFGTFGVIRYYFSDEPDQFSLDAETGWVTLRSRLDYELMRRFTLTVLARD GGGEETTGRLRINVLDVNDNAPVFQKETYVGSLMENEQAAQQVIRARATDEDSPPNNILT YSIIYASQFMSYFSISVIEGYAVISVNRPLDYELVPGGMIYLTLMAKDGGNPPLNSTVPI TIELFDENDNPPEFSLPSYIINILENIIAGATVLFVNATDLDASREFGQASLIYSLQGSS QFRLNTRSGEITTTALLDREVKSEYILIVRAVDGGVGPLQKTGIATVNITILDINDNAPV WRDEPYQANVVEMSPIDTDVISVLAVDPDNGDNGTVVYSINPENPFYTINRSTGKIRTSG AVLDRESRDTRAAQLMRTIVVSATDRGTPPLRSSASATVYVNLLDLNDNDPAFLNLPFVG EVPEGLPIGSSVFRVQVQDPDESENGAVTIALQMGMPRLDFRLNITTGILYSMAVLDREQ IGQYYLRIIAYDAGQFPRTSTSTLTITVLDINDGTPTFFPNVYNISLEESVPRDYVLVRL NCSDNDSGLNAELSYFITDGNQDGKFSVGFRTGVVRTVVGLDRETQASYRLVIEAIDNGP AGSRRTGTATVYVEVLDVNDNRPIFLQNSYETTVLENIPKETSILQVQATDADAGENGRV LYRILSGNSGQFNMDRLSGLISRGDKALDRETQSSHVLEVEAFNSDQGSMRSSVRVIVYV EDVNDEPPVFTQSQYNRLGLRETAGIGTSVVVVRATDPDTGNGGAVAYALVSGSDRKFEV DMSTGLVTTLDYLDYETKTSYLINVSATDQSPPFHRGYCTVYVTLLNELDEAVAFLSAGY EVSLRENIATGTEVVQVQAQSADNLNQLTYRFDPDTSPAALALFKIDSVTGRITVMGLLD REEGDSYTLTIVADDGGPKRDSTVVSITILDENDNSPEFDITSDLSVNIPEDTPIGQRVA VVLARDRDAGRNGLVNFTLIAGNMQDVFKINTANNTYGEVYVNAPLDREAVDRYLLKVRA MDNGSPARFTDLSLTVNIMDVNDNPPVVQSPRGYNVSISENVGGGTSVLRVIATDRDIGP NAMLSYYITGGNQDLTFRVDRMTGEIVTRPSPPDREKQQQYTLAVTVEDDGTPPLSTSTT VWVRIIDENDNAPEFPEEEYVTELREGPNTVGATIATVTAIDPDEGLNGTIRYAISKGNL AQTFQISDVTGQIVVIKELDYEISNGHYVLTVTATDHCPIPQFRLTSSTTVLVNVVDVND NAPIFPRVFEGPFEISEGQPGPRVWTVRATDADSGSNGKVEYSITAGDLKNEFVISSVEG ELRVRRDVELDRETISYYNITITAKDLGTPAQSATVVVGVQVLDINDNDPVLLNLPFNTS VSEGAPVHTSIAQVRAYDSDSGRNALLTYNITAGNTDGAFYINETSGVVQVNRPLDRERV AEYRLTITVKDNPDNPRIARRDSELLVVTILDVNDNRPIFSQPSYRGEISENSPAGTTVV ILNGPVLAEDRDIGENAVVRYRLLGARLDLFSADPLTGVVSVRGGAVLDREAFSEPRVEL FLLGEDVGALNSSVPLTITILDKNDNPPVFSPPSFTVRLPENSPTGVVVTLLSASDADAG SNAWLQYRLDSGAQDRFIVDALSGAVLVGNATLDREERSSYRLVVIATDRGTPPLSGTAT LSVVLDDVNDSRPQFIRPVQTISVNESTPPGEVVAALTAEDPDLRPRLEYYIISVEAKDD GNKPVDGLQESFGIDFHTGAVFVRNPLNRELVATFEIIVSVHDNASEVIDMSVSVPNAKL TINVLDVNDNSPRFRPFGVTNFSESILEGAHPGTTLLSVTAVDPDKGPNGQIIYQLLHLP RGDYIRLEDPSTGKVVANRTVDYEQVQWLNFTVRAQDHGTPPRFAELPVYLRIVDVNDNN PVFQQPLYQKSLFEDVALGTIIVSVSATDADSGLFSVIEYGLVDGEGKFGITPTTGDIYI LSRLDRETKDRYTLTAYARDNPGGSPNNRRENSVQVQLTVLDVNDFRPRFSERVFTTSVF ENEPVGTSVITLTATDLDEGENALLTYSLQGPGADAFSLDPDTGLMRSLRFLQSFERFNL TVVATDHGRPPLWGTTGLQITVIDVNDNRPIFVRPANGTIMHILEEQPPGLVVYEVFATD EDEGVNGEVRYSFLQTGAGNRDWENFHIDAVTGVITTAVKLDREKQALYSLVVVAYDLGQ PVPYETMQPLQVALSDIDDNEPVFLKPPRGSLPYQSLSAPEHSSPGTVVGNVTGAVDADE GSNAIVYYFIAGGDSEGNFGMSVAGVLRVKKDLDREEIPLYSIIVKASSNRNWSPPRGQR SQRAQVLDPSRDPTLQEVRIFLEDINDQSPRFTKLEYTAGVAADAKVGSDLIRVQAVDND IANNSLVLYHILSIRYIKLQSNDSEDMGNVFIIGETDGIIRTFDLFMAYDLGYFIVEVLA RDLAGHSDVALVGIYILRDDQRVKIVINEIPERVRLFQEEFINLLSNITGAIVNTDDVQF HVDKKGRVNFAQTDVLIHVVNKQTNRILDVERVIQMIDENKEQLRNLFRNYNILDVQPAV TARAPDDLTTLQMAIIILAVLLFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNHGLMDI LDMPNTNKYTFEGANPVWLDPFCRNLELAAQAEHEDDLPEDLSDITDLWNSPARTHGTFG REPQASKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKGSLLNVVLDDYLRLKKLFAARLV TKSTSQGDQSSVTELIQSDMDDEDDERVGRGTLRFKHKLPIELRGPDGVHAVHGSTGTLL TSDLNSLPEDDQRALARSLEALHADGGLYAERNARTESAKSTPLHKNKGSDTLSGSPLEI TEL NT seq 10092 nt NT seq  +upstreamnt  +downstreamnt atgtcatggtgtgaaggttttgggggcaagatgactccggtcaggttgctactctcctta ttgctgctacacacgctttgtgaagcctctaatcagcctccccgtttccagaattatttc ttccagtcgtacctgctcatctatgagaatacagcagtaggttcatccattacccagctg caggcggtggatccagacggcgagccgctggttttcggtgtgttgggggaagaggccatg cggtacttcgctgtgcaggagacgacgggggtcgtgtggctcagacagcctcttgacaga gagaccaagtcagagatgcaggtggaattctttgtgagtgacagtcagggggtggtcaag gatacagtgaacatacagattggagatgtgaacgataactccccaatatttcacaaccag ccctatgctgttcatataccagagaacactgcggtaggcacatcagtgtttatggtgaac gccacagacccggatcaggggacgggtggcagcgtgctcttctccttccagccaccttct ccgttcttctccatcgacggggcaagagggaccgtcaccgtgaccagagctctggactat gaggtcacagccgcctatcagctcacggtcaatgccacggaccaggataaacgtcgtccg ctctctagtctggctaatttggcaattacaatcactgatgtgcaggacatggaccccatc tttaccaacctcccatacagcactaacatagtggaggacgcaccacccggttatgaagtg cgtaagatcagggcgatcgatcaggacttgggtcgacctcgtggaattggatacactatc gtatcaggtaacaccaacagcatgtttgccttggactacatcagcggatctctgacggtg agcggacagctggaccgggaaaacccgctttactcgtctggattcaccctcactgtgaag gctactgaactgaatgatgaccgctcgccctcatctgctacagtcatgaccgccttcacc atcctgctgatcgataagaacgataatcctcccagatttaacagctctgaataccgcgtc ctcatccctgagctggcgcaggtcggctttgctctccctctcttcatacaggttgaagac aaagatgagggagtgaacagcatgtttcaggtggtcctgacagggaataattcggagcac ttcaccatctctcccacctcggttcagggaagagccgacatccgcgtgcgtgtggccatc ccgctggactatgaaaccatcaggagctacagtttttctctgtatgccaacgagtctctt tctgagcatgtgggtttcgcccgagtcttcatcgacctcatcaacgagaacgacaacagg cccatattcagccaaacgctttataacatcagtttacctgagagcacagcacctggaaca tctctgcttcgaatacaggccacagataatgactttggcacatttggagtgatccggtat tacttcagcgatgagccagaccagttttcattggatgctgagacgggctgggtgactctt agaagtcggttggattacgagctcatgcggcgctttactctaacggtattggcccgtgat ggaggaggggaggagactacgggtcgcctccgcattaacgtgctggacgtaaatgacaat gcgccggtcttccagaaagagacgtacgtgggttcactgatggagaacgaacaggctgcg cagcaggtcattcgagcacgggcgacggatgaggactctcctcccaataacatcttgacg tactccatcatctacgcctctcagttcatgtcgtatttcagcatcagtgtgatcgagggc tatgcagtcatctccgtgaaccgtcctctggattatgagctggtgcccggtggaatgatc tatctgactctgatggccaaggatggagggaacccacccctaaacagcactgtgcccatc accattgagctctttgacgagaacgacaaccctcccgagttcagtcttccatcttacatc atcaacatacttgagaatatcatcgcaggagcgacggtgttgtttgttaacgccacggat ctggacgcatcccgggagtttggtcaggcttccctcatctattccctgcagggaagctca cagttcagactaaacactcgctcaggagagatcaccaccacagctctgctggatcgcgag gtgaaatctgaatatattctgatcgtgcgagccgtggacggaggggtggggccactgcag aagactggcatcgctacggtgaacatcactatactggacataaacgacaacgcccccgtg tggcgagatgagccttatcaagcgaacgtcgtggagatgagtcccattgacacagatgtc atttctgttttggcagtggaccctgataatggtgataatgggacagtggtgtactctata aatccagagaacccattctacaccatcaatcgaagcaccggtaagatccgcaccagcggg gcggtcctggacagagagagtcgagacacaagagccgcacaacttatgagaaccatcgtt gtctctgctacggaccgtgggactcctccactgcgctcttcagcgagcgctacagtgtac gtcaaccttctggatctcaatgacaatgaccccgcctttctcaacctcccatttgtcggc gaggtcccggagggacttcctattggatcgtccgtgttcagagtgcaggtgcaggaccct gatgagagtgagaacggagcggttaccatcgcgcttcagatggggatgccacggctggac ttcaggctcaacatcaccactggaatcctttactctatggcagtgctggaccgcgagcag atcggccagtattatctgaggatcattgcgtatgacgcgggacagtttccacgaacgtct acaagtactctcactatcacagttttggacataaatgatgggacgccaacgtttttcccc aacgtttataacatatctttggaggagagcgtgccgcgcgattacgtgctggtcagactg aactgttcggataatgactcgggtctaaacgcagagctcagttatttcatcacagacggg aatcaagatggtaagttcagcgtgggttttcggaccggcgtggtccgcaccgttgtggga ttggatcgggagacgcaggcctcgtacaggctcgtgattgaagcgattgataatggtcca gctggtagcaggaggacaggcacagctacggtgtatgtggaagtgctggacgtcaatgac aacaggcccatattccttcagaacagctatgaaaccaccgtcctggagaacatcccaaag gaaactagtatattacaggttcaggccacagacgctgacgctggggagaatggaagagtt ctctacagaattctctcgggaaacagcggtcagtttaacatggaccgtctgtctggactc atcagcagaggtgataaagctctggaccgagagacgcaaagctcacatgtgctggaggtg gaggccttcaacagtgaccagggcagcatgcgcagctctgtcagggtgattgtgtatgtg gaggacgtgaacgatgagcctccggtcttcacacagtcgcagtacaatcgtctggggctc agagagaccgctgggatcggaacctctgttgtggtggtccgagctacagaccccgacaca gggaacggtggcgctgtggcgtacgctctggtctcaggttccgaccgtaagtttgaggtc gacatgagtacgggtctggtaactaccttagattacctggactacgagaccaagaccagc tacctaataaacgtgtcagccacagatcagtcacccccgtttcaccgcggctactgcacc gtctacgtcacgttactcaacgagctggatgaggctgtggcgttcctgtcggccggttac gaggtgtctctgagggagaatatcgccacgggaacagaggtggtccaggtgcaggcgcag tcggccgataacctgaaccagctgacgtaccgctttgacccggacacttcacccgccgct ctggccctctttaagattgacagcgtcacgggccgtattacggtgatgggactgttggac agagaggagggcgattcatacacccttactattgtggctgatgacggtggaccaaagaga gactctactgtggtgtcaatcaccattctcgacgagaatgacaacagccccgagtttgac atcacttctgatttgtctgtgaacattccagaggacacgcccatcggtcagagagtggcg gtggtgctggcccgagacagagatgctggaaggaatggactggtaaatttcaccctgatt gcgggtaacatgcaagatgtgttcaaaatcaacacagccaacaacacgtatggagaggtt tacgtgaacgcccctctggaccgtgaagctgtggaccgctacctgcttaaagtgcgggcc atggataacggttctcccgcgaggttcactgatctttcgcttacggtgaacattatggac gtgaatgacaaccctcccgtcgtgcagagccctcgcgggtacaacgtcagcatcagtgag aatgtggggggcggtacatcggtgctgcgtgtcatagcgacagaccgtgacatcggaccc aatgccatgctgtcgtactacatcaccggcgggaaccaggacctgaccttcagagtggac cgtatgacaggagagatagtgactcgcccctcacctcctgacagagagaaacaacagcag tacacgctggccgtgacggtggaggatgacggaactccgcctttgtctacgtccaccacc gtgtgggtgcgtatcattgatgaaaacgacaacgcgccagagtttccggaggaagagtac gtaacagagctcagagaggggccaaacactgtgggggccaccatcgccacggttacagcc atcgaccctgacgagggactcaatggaaccatccgttatgccatctccaagggcaacctg gcacagacgtttcagatcagtgacgtaacgggtcagatcgtggtcataaaggagctggat tatgaaatcagtaatggtcattatgtgctgacggtcacggccacagatcattgtcctata cctcaattcagacttacctccagcacaacagttctggtcaatgttgtggatgtgaacgat aacgcacccattttcccgcgtgtgttcgaggggccgtttgaaatctcagagggtcagccg ggtccccgtgtctggaccgttagagccacagatgctgactcgggttctaatgggaaagtg gagtacagcatcacggcaggggacctgaaaaacgagtttgttatctcatcggttgaggga gagttgagagtgaggagagacgttgaacttgacagagaaaccatctcctactacaacatc actattaccgctaaagatctcggaacgccggcacagagcgccacagtggtggtgggcgtg caggtgctggacattaatgacaatgacccggtcctgctcaacttaccgtttaacaccagc gtgagcgagggagcgccggtccacacctccatcgctcaggtgcgggcgtatgactctgac agcggccgcaacgccctgctcacgtacaacatcactgctggcaacactgatggagcgttc tacattaatgagacgtcaggtgtggttcaggtgaacaggccactggacagagagagagtg gctgaatatcggctcaccatcaccgtcaaggacaacccagacaacccccgcatcgcccgc cgggactcagagttgttggtggtgaccatcctggatgtgaacgacaacagacccatattc agtcagcccagctacaggggggaaatcagcgagaactcacccgcaggcacaactgtggtg attctgaacggccctgttctggcagaggacagggacattggggagaacgcagttgtgaga tatcgtctcctgggggccagacttgatctcttctctgcagatcctctcacaggcgtggtg tcagtgcgtggcggtgctgtgctggacagggaggctttctctgaaccgcgggtggagctc tttctgctcggggaggatgtgggggcgttaaacagcagcgttccactcaccatcaccatc ctcgacaagaacgacaacccacccgtcttcagtccacccagttttactgttcgtctgcct gagaacagccccaccggtgtggtggtgacgctgctctcagcgagcgacgctgatgccggc tccaacgcttggctgcagtatcgtttagacagcggtgctcaggaccgctttatcgtcgac gctctttctggtgccgttctggtcggcaacgctacgctggaccgagaagagcgcagctcg taccgcctggtcgtcatagcgaccgaccggggcacgcccccgctctcgggcacggcgacg ctgtctgtcgtactggacgatgtgaatgactctcgtcctcagttcattcgtcccgtgcag accatcagcgtgaacgagtcgactccaccaggagaggtcgtcgccgcactgaccgctgaa gaccctgacctacgaccccgcctggagtattacatcatctcggtggaagcaaaggatgat gggaataaaccggtggatggactgcaggagtcgtttggaattgactttcacacgggtgct gtgtttgtacgaaaccccttgaacagagagctggtagccacttttgagatcatagtttca gttcatgacaatgccagtgaagtgattgacatgtccgtcagtgtccccaacgccaaactg accatcaatgtgctggatgtcaatgacaactctcctcggtttcgtccctttggggtgaca aacttctctgagagcattctagaaggtgcccatccgggtacaacgttgctgtcagtgacg gctgttgatccggacaaaggaccgaacggtcagatcatctaccagctgctacacctgccg cgtggagactacatacgacttgaagatccatctacaggtaaagttgtggctaatcggacg gtggactatgaacaggtgcagtggttaaacttcacggttcgtgctcaggatcacggcacg cctccgcgcttcgctgaacttcctgtctatctgcgcattgtagacgtcaatgacaacaac cctgtctttcaacagcctttgtatcagaaatcattatttgaagatgttgcgctcggcacc attattgtgagcgtgagtgcgaccgatgcagattccggactgttctctgtgattgaatat ggattggtggacggagagggcaagtttggcatcacgcccactacgggtgacatctacatc ctgtctcgattggacagagagaccaaagaccgctacacccttacggcgtatgccagggac aaccctggcggcagccccaacaaccgacgagagaactcagtccaggtgcagttgacagtg ctggatgtaaatgactttcgtccgcgtttctcagagagggttttcactacgagtgttttt gagaatgagccggttggcacatcagtgatcacgctaaccgccacagatctggatgagggc gagaatgcgttacttacctacagcctgcagggtcctggagcagatgcgttttctctggac cctgacaccgggctgatgcgttcgctgcgatttctgcagagtttcgaaaggtttaatctg accgtggtggcgacggatcacggcagaccccccctttggggcacaaccggtctccagatt acagtcatagatgtgaatgataacaggcccatttttgtgcgtccggccaatggcacgatc atgcacatactagaggaacagcctcctggactggtggtgtatgaagtgttcgccacagat gaggatgagggagtgaacggagaggtccggtacagctttcttcagaccggagcaggaaac agagactgggagaacttccatatagatgctgtgaccggagtgatcaccactgcggttaaa ctggacagagagaaacaagccctgtacagcctggtcgtggtggcgtatgatctcggacag ccggttccatatgagaccatgcagcctttacaggtggctctgtctgacatcgacgacaat gaacccgtcttccttaaacctccgagaggaagtttaccatatcagtccctgtcggcccct gaacactcgtctcccgggacggttgtgggtaatgtgaccggcgcggttgatgctgacgag ggatctaatgccatcgtctactatttcattgcagggggcgatagtgaaggaaactttggc atgagtgtggccggcgttttacgggtcaagaaagatctggatcgggaggaaatcccactt tattccatcattgttaaagcctctagcaaccgcaactggtctcctccaagaggtcagagg tcacagcgggcacaagttctggacccgagccgtgaccccacattgcaggaagtaagaatc ttcctggaagacatcaatgaccagtctcctagattcaccaaactggagtacacggcaggt gtggctgcagatgcgaaggtgggctctgatctgatccgggttcaggcggtggacaatgac attgccaacaacagtcttgttctgtatcacattctgtccatccgctacatcaaacttcag tccaatgactctgaggacatgggcaacgtcttcatcatcggagaaactgatgggattatc cggacgttcgatctgttcatggcatatgatctggggtatttcattgtggaggtgttggct agagatctggccgggcacagcgatgtggctctggtgggcatttacatcctgagagacgac cagcgggtgaaaatcgtcattaatgagataccagagcgggtccggctcttccaggaggag tttataaacctgctgtcaaacatcacaggagccatagtcaacactgatgatgtgcagttt catgttgataaaaaaggaagagtgaacttcgctcaaaccgatgttttgattcatgtggtc aacaagcagaccaaccgtattctggatgtggagagagtgattcagatgatcgatgagaat aaggagcagttgaggaatctgttcagaaactacaacatccttgacgttcagcccgccgtg accgcacgtgctcctgatgacctcaccacattacagatggctattatcatcttggcagtt ttgctcttcctagcggccatgttgtttatcctgatgaactggtactaccgcacagtgcac aagaggaagttaaaggcgattgttgccggctccacaggaaatcatgggttgatggatatt ctggacatgcccaacactaacaagtacacgtttgaaggagcgaatccggtgtggctggat ccattctgcaggaatctggagttagctgcacaggcggaacatgaggacgatctgcctgaa gatctgagcgacatcacagacctgtggaacagtccagctcgcacacatggtacatttggc cgtgagcctcaggcttccaaaccagaagacgaccgatatctaagagctgctattcaagag tacgacaacatcgccaaactgggacagatcatgagagaggggcccatcaagggctcgctg ctcaatgtggttctggatgactacctgaggctcaaaaagctgttcgccgctcgtctggtc accaagtcaaccagccagggtgaccaatcatcagtcacagagctgatccagagcgacatg gacgatgaagatgatgagcgcgtcggtcgagggacccttcgcttcaagcacaagctcccg atcgagctaaggggtcccgacggcgtgcacgcggtccacggcagcacgggcacgctcttg acctctgacctcaacagcctgcctgaagatgaccagcgtgcactggcgcgctctctcgaa gcgttgcacgcggatggcggactgtacgcggagcggaacgcccgaacagaatccgcaaaa tcgacgcctttacacaagaacaagggcagcgacactctctccgggagtccgttagagatc acggagttatga

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