Triplophysa rosa: 130559254
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Entry
130559254 CDS
T09216
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130559254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tros03016
]
130559254
03036 Chromosome and associated proteins [BR:
tros03036
]
130559254
Transfer RNA biogenesis [BR:
tros03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130559254
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
130559254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
130559254
NCBI-ProteinID:
XP_057198200
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Position
LG9:2821553..2930078
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AA seq
1219 aa
AA seq
DB search
MSEAVRAMCEELTKAVNVMMDAESSQRYRLEALKFIEEFKEKCPFCVECGLQLAERSQTA
VVRHFGLQILEHVVKFQWNDMPLQEKVQLKNCTMELLSHGMQPVLEEECYVKDALSRIVV
EMVKREWPQHWPDMLKEMEALTAMGDAQTELVMLILLRLAEDVITFQTLPIQRRRDIQHT
LTQNMDSIFTFLLGVLQLHVNEYKKLKSIVGQELRMKAHCRVGVATLNTLAGYIDWVALG
HITNDNCRLLEILCLLLSEPELQLEAAECLLIAISRKGKLEERQPLMVLFNEAAMNCILS
AAQSADGAASCIQSSNGIVERRYTFLKRLCQVLCALCGQLCSLVGSDVEVPVPVNLNKFM
EALLSFTTHPSQFLRSSIQITWCSLFRHEVLSKDPVVGQMAIKYLEVARINLVKTGFPSK
NDCQGCEFSRMDFDSDEDFNSYFNSFRAQQGQAVRLACNIASFEAFQIAREWLKYQISTP
IDTGSTTSKTGEGLCSALSPSVVQWEAMTFFIECVFGQLFKMPEKEKQPVDGSMELLRAI
VNYETKDPLILSCLLTNISTLFPFVKHQPHFLPQVLFKIFPSITFELEESKVPWTRAVKN
VRRHACSSIVRMCRDFSDLMLPCFDLMYEHVKRLFSDELLLTQMEKCALIEALILISNHF
NDYNKQKAFLVELMAPVTAQWLSGEMKRVLWDPAAFLAYVGADQVNCESGTEDQTGINRA
QISFCVYTIMAVVKRARWPADPEAAKRGNFVVGYTTDGAPLYRNPCAEPLCPLLPNLLAL
IRTLSSLFLPENLARLSKTFTNVYDIMDVEKNFVLGVVQPVLDAYDTPVYRTVVERMQGF
FSSLYDSCYQILGNAGSCLEQDFYAIEGLTEQIVGSAFTHLDSIPDHRLRSLLRLFVKQL
AISCPHEYYDSLLCLLLGPLFRHLLQRLSFQWPLVNQRTSNLCGQVEDDTYEENQVTREM
VEEQMLRLLTREVMDLLSVTCIIRKFPDSFGKKEEEEGHEEMMLMDSSHGIQMNAAQASE
ELSELGKKLLQCEDIYMTLLTISFNSLSWRDTMNCQRTASMLCWPLLKQVVDGNLLPEAV
TWLFTSVLKGLQMHGQHEGCNAALTQLAWLIYETLRPRYIELRSIMNQIPDIHIDALEQF
DQKTIQPTVSKAAEKKRKDQFKRLIAGTVGKPLGQQFRKYVHIRNLPSLFKKPKPMQDIL
ENTNAAGLMGLFTPECDNC
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagcggtgcgtgcgatgtgcgaggagcttacaaaagctgttaatgtgatgatg
gatgcagaatccagccaaagataccgcctggaggcccttaagtttattgaagagttcaag
gagaaatgtcccttctgtgttgagtgtggtctccagttagcagagagatcgcagactgct
gtggtcagacactttggcttgcagatactggaacatgtggtcaagtttcagtggaatgac
atgccactgcaggagaaagtccagttgaaaaactgcacaatggagctgttatcacatggt
atgcagccggttctagaagaggaatgttatgttaaggatgccctgtcacgcatagtagtt
gaaatggtcaaaagagagtggccgcagcactggcctgacatgcttaaggagatggaggcg
cttactgctatgggggatgctcagacagaacttgtgatgcttattctgttacggttagct
gaggatgtgatcacgtttcaaacattacccattcaaagacggcgagatatccagcacacc
cttacacagaatatggacagcatcttcacctttctgcttggcgtactgcagctccatgtg
aatgagtacaagaaactgaaaagcattgttggtcaagaattaaggatgaaagctcactgt
cgagttggtgtggctactcttaatactctggctggctacattgactgggttgctctaggt
cacatcactaatgataactgccgtcttttggagattctgtgccttttgctgagtgaacct
gagctacagttggaagctgcagagtgtcttctcattgccattagtaggaagggaaagtta
gaggaacggcagcctcttatggtgctgtttaatgaagctgccatgaattgtatcctttct
gctgcacagtctgcagatggggcagcttcatgcatccaatcatcaaatggcattgttgaa
agaagatacacatttttgaaaaggctgtgtcaagttctctgtgccctttgcggccaactc
tgctcactagtgggttcagatgttgaagtgccggttcctgttaacctgaataaatttatg
gaagcacttctgtccttcaccacccatcccagccagtttttgaggtcttccattcaaatc
acatggtgtagcctattccgacatgaggttttatcaaaggatcctgtagttggccaaatg
gccattaaatatttagaagtggcaaggattaatcttgttaagactggatttccctcaaaa
aatgattgtcaaggctgcgaattctccaggatggactttgatagtgatgaagattttaac
tcctactttaattctttcagggctcagcaggggcaagcagttcgcctggcttgcaacatt
gcctcttttgaagcctttcagattgctagagaatggctgaagtatcagataagcacacct
atagatactggaagtactacatccaagacaggggaaggtctctgttctgctctgtccccc
tcagtggttcagtgggaagccatgactttcttcattgaatgtgtttttggacagctcttc
aaaatgccagaaaaggagaaacagcctgtagatgggagcatggagttgttgagggcgatt
gtaaactatgagacgaaagatccactcattctgtcatgtcttcttaccaacatatccact
ctctttcccttcgtgaaacaccagcctcactttttgcctcaagtactctttaagatattt
ccttcaatcacatttgaattggaagaaagcaaggtgccttggacacgagctgttaagaac
gtcagaagacatgcctgttcctccatcgtaaggatgtgtcgagatttttctgaccttatg
ctgccgtgttttgacctgatgtacgagcatgtgaagaggttgttctccgatgaattgctg
ctgacgcagatggagaaatgtgccctcatagaagccttgatacttatcagcaatcatttt
aatgactacaacaagcagaaagccttcctggtggagctcatggcacctgttactgcacag
tggctgtcaggagagatgaaaagggtgttatgggatcctgctgctttcttggcttatgtt
ggagctgatcaggtgaactgtgaatcaggcacagaggatcaaactggtattaacagggca
cagattagtttttgtgtgtacaccataatggcagtggtgaagcgtgctcgttggcctgct
gaccctgaagcagctaaaaggggcaacttcgtggtggggtacactactgatggagcccct
ctctacagaaatccctgtgctgagcccctgtgtcccctcctacctaaccttctggccctt
atcaggaccctgagcagtttgttcttgccagagaaccttgctcggctcagcaagaccttc
actaacgtctatgacataatggatgtggagaagaattttgttttaggagttgttcagcca
gtgttagatgcctacgataccccagtgtatagaactgttgttgaacgcatgcagggcttc
ttctcctccctctacgatagctgttaccagatccttgggaatgcaggttcatgcttggaa
caagatttttatgcaatagagggtttgacggaacagattgttggctctgcctttacacat
ctcgacagcattccagaccatagacttcgctccctactccgtttatttgtgaagcagttg
gctatatcctgtcctcacgagtactatgacagccttctctgtttgctgttgggccctttg
tttcgtcatctactgcagagactaagctttcagtggccgcttgtcaaccaacggaccagt
aatttgtgcggtcaagtggaggatgatacttatgaagagaaccaggtgactcgagaaatg
gtggaggaacagatgttgcggttgcttacacgagaggtcatggaccttctaagtgtgact
tgtattataagaaagtttccagactcgtttgggaaaaaagaggaagaagagggacatgaa
gagatgatgttaatggattcctctcatggtattcaaatgaatgctgctcaggcatcagaa
gagctctcggaattgggcaagaaacttcttcagtgtgaggatatttatatgactctcctg
actatttcttttaactccctgtcctggagagacactatgaactgccaaagaactgctagt
atgctctgctggcctttgctaaaacaggttgttgatggtaacctgctaccagaagctgtg
acctggcttttcaccagtgtactaaaaggactgcagatgcatgggcagcatgaaggctgc
aatgctgctctaactcaactggcgtggctcatctacgagactctgaggcctcggtacatt
gagctacgttccatcatgaatcagatcccagacatccacatagatgcacttgagcagttt
gaccaaaaaaccatccagcccactgtctcaaaggctgcggagaaaaagagaaaggatcag
tttaagagacttattgcaggcactgtggggaaaccacttggacagcagttcaggaaatat
gttcacatccgaaacttaccatctctttttaagaagccgaagcctatgcaagatattttg
gagaacactaatgctgcaggactgatgggtctattcactcctgagtgtgacaactgctga
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