Triplophysa rosa: 130559601
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Entry
130559601 CDS
T09216
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
tros
Triplophysa rosa
Pathway
tros03022
Basal transcription factors
tros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130559601 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
130559601 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130559601 (mnat1)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130559601 (mnat1)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130559601 (mnat1)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130559601 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-C3HC4
zf-UDP
zf-RING_2
TRAF6_Z2
zf-P11
Motif
Other DBs
NCBI-GeneID:
130559601
NCBI-ProteinID:
XP_057198771
LinkDB
All DBs
Position
LG9:18776547..18792639
Genome browser
AA seq
308 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKREFDFPALKEYNDYLEQVEDIVYNMTNNVDVEKTKQ
MMEQYQRVNRDVIQRNKVKLTREQEELEELLLLEQQNIEQRRLETLQEEQRQLQAKRKNK
QALLDELESSQLPAALLLAQHKDRASQLETQIEKQKQNVKPTNIFSTGILMGQTVSLAPV
THVEEVLYVYQPIHIDTYGPPIPELEQLGRLGYLNHVRTASLQDQAGGYTSGLACHRAVQ
DAFSGLFL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcaaggatgcccgagatgcaagacgaccaaatacaggaatccatctctgaag
ctaatggttaatgtgtgtggacacacgctgtgtgagagctgtgtggacatgctgtttgtt
cgtggctcaggtaactgtgtgcagtgtaacacccctctcagaaagagtaatttccgtgtg
cagctttttgaagatccagccatcgataaagaggtggagatccgcaagaaggttcttaaa
atttataataagagggaattcgattttccagctctgaaagaatataatgactacctagag
caagtggaagacattgtgtacaacatgactaataacgtagatgttgaaaagacaaagcag
atgatggagcagtaccagcgagtgaaccgggatgttatacagagaaacaaagtcaaactg
acgcgtgagcaggaggagttggaggagttgttgttgctggagcagcagaatatagagcag
aggagactggagacccttcaggaggaacagagacaactacaggccaagaggaaaaacaaa
caggccctgctggatgaactggagagctctcagttacctgcggccttgctcttggctcaa
cataaagatcgagcctctcaactggagactcagatagaaaaacagaagcagaatgtcaaa
ccgacaaacatcttctctactggaatactgatgggtcagacggtgtctttggctcctgtg
actcatgtggaagaggtgttgtacgtctatcagcctattcacatcgatacatacggcccc
cccattccagaactggaacagctgggccgactggggtatttgaatcatgtgcgcacagct
tctctacaggatcaggctggtggttatacatcaggattggcctgccatcgtgctgtccag
gatgcattcagtggcctgtttttatga
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