Triplophysa rosa: 130559643
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Entry
130559643 CDS
T09216
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tros
Triplophysa rosa
Pathway
tros03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130559643 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130559643 (polr1b)
Enzymes [BR:
tros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130559643 (polr1b)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
130559643 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
130559643
NCBI-ProteinID:
XP_057198830
LinkDB
All DBs
Position
LG9:23334103..23343581
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AA seq
1132 aa
AA seq
DB search
MDLSKWCNLSSAPSLKNLTEAGFGVPKKKQHVLVQHLVKAHIESFDQAVTDGLCRVVGAI
PPLEFTFKEERISMSYVEAVMHTPSVSKGGISKDLRVFPAECRGRRCTYRGKLVADVSWS
INGVPKGIIKQSLGQVPVMVKSKLCNLYSLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPITLCRPKFKSRGQGYTQYGISMHCVKEEHTAINMNLHYLDNGTVMLNFIYR
KELFFIPLGFALKALVDFSDFQIYQELIKGREENSFFQSCVSQMLRMVMDEGCTTKEKVL
NYLGERFRVKLNLPEWYTHKQCANFLLDECLCIHLKTDVEKFYTLCLMTRKLFSFAKQEC
MEENPDSLMCQEVLTPGQLYLMFLKEKMEAWLMSVKLVLDKRAQKLVGLSAENLLKAFTK
ASDLTKPFEYILATGNLQSKTGLGMLQDTGLCVVADKLNFVRYVSHFRCVHRGAAFAKMR
TTSVRKLLPESWGFVCPVHTPDGEPCGLMNHLTASCEIVAPLYPTTTLPALLCSLGMTPA
DGTPGQPYSDCYPVILDGAMIGWVEREMASSVAESLRRFKVLGEKKVPPWTEIVLVPQTG
KASLYPSLHLFTTPCRMVRPVRNLALGKQELIGTFEQVYLNVGIFESEIEEGVTTHQELF
PHSMLSVVAALIPFPDHNQSPRNMYQCQMSKQTMGFPLHSYQDRSDNKLYRLQTPQSPLV
RPVMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTELVDLS
EKFRGEDSVVFGVTPNDPKVMNQLDADGMPFIGSVLKYGDPFYCCVNLNTNKSHVTFYKS
QEDCVVDNIKVCSNDNGTGRFKRVCITYRIPRNPTIGDKFASRHGQKGILSRLWPTEDMP
FSESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLCHDATPFTFSEENSALEHFG
EMLKAAGYNYYGTERLYSGQSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPLGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLLEK
PPPEWSAMRLRKTVCLLCDKSDSIETVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctctcaaagtggtgcaatttatcctccgctccgagtttaaagaatttgacagag
gcaggctttggtgtcccgaaaaagaaacagcacgtgctcgtgcagcacctggtgaaagcg
cacatcgagtcgtttgatcaggctgttactgatggactgtgtcgtgttgtgggggctatt
cctccactggagttcacgttcaaggaagagagaatcagtatgtcttatgtggaggctgtg
atgcacactccatcagtctctaaaggaggaatcagcaaagatctgagggtctttcctgct
gaatgcagaggcagacgatgtacttacagaggaaagctggtggcagatgtgagctggtcc
ataaatggagtacctaaaggaatcatcaagcagtctttgggtcaggtgcctgtcatggtc
aaatctaaactgtgcaacctttacagtctctcgcccaaagaactcatcgagcatcacgag
gaagccgaggaaatgggcggttattttatcgtgaacggcatcgagaaagtgattcgtctg
ctgatcatgccgaggagaaactatcccattaccttgtgtagacccaaatttaagagcagg
ggtcagggctacacacagtacggtatttcaatgcactgtgtaaaggaggaacacacagcc
attaatatgaatcttcactacctggataacggaacagttatgctgaatttcatttaccgg
aaagagctgttctttattcccttgggctttgcgctgaaggctctggtagacttctcggat
ttccaaatctatcaggagctgatcaaaggtcgagaggagaactcgttcttccagagctgt
gtctctcaaatgctgcgtatggtcatggatgagggctgcacgactaaagagaaggtgctc
aattacctgggcgagcgtttcagggtcaagctgaaccttccggagtggtatactcacaag
cagtgtgccaactttttgttagatgaatgtttgtgtatccacctgaagacagatgtggag
aagttttacacgttgtgtctaatgacacgcaagctcttcagctttgccaagcaggagtgc
atggaagaaaacccagacagtttgatgtgtcaggaagttctcacacctgggcagctctac
ctcatgttcctgaaagagaagatggaagcctggctgatgtctgtgaaactggtcttggat
aagagagcgcagaaactggtaggattgtctgcagagaatctgctcaaggcctttaccaaa
gcctcggatctcaccaaaccttttgagtatattttagccacaggaaacctccagtccaag
acaggtctgggcatgctacaggacacaggactgtgtgtcgtggcagacaagctgaacttc
gtccggtatgtttctcatttccgctgcgtgcacagaggagccgcctttgctaagatgagg
accacgtctgtgcgaaaactgctgccagagtcctggggtttcgtgtgccccgtgcacacg
cctgacggagagccctgtggtctcatgaatcacctgactgccagctgtgagattgtggcc
ccactttatcccacaaccactttgccggccctgctctgttcgctgggtatgactccagca
gacgggacccctggtcagccgtactccgactgttatcctgtcatactagacggggccatg
atcggatgggtggagagagagatggcgtcgtctgtggctgagtctctccgcaggtttaaa
gtgctgggagaaaagaaggtgccaccctggactgagatcgttctggttcctcagacgggt
aaagccagcttgtacccctctctccatctgttcactacaccctgtcgcatggttcggccc
gtccggaacctcgccctgggaaaacaggagcttatcggcacctttgagcaggtgtacctc
aacgtgggaatctttgagagcgagatcgaggaaggagtcaccacgcatcaagagctgttt
cctcacagcatgttgagcgtggtggcagctttaattcccttccccgaccacaaccagagt
cccagaaacatgtaccagtgccagatgagtaaacagaccatgggcttcccgttgcactcg
taccaggaccggtccgacaacaagctgtaccgtctgcagaccccccagagtccgctggtc
agacctgtgatgtacgaccactacaacatggacaattaccctatcggcaccaacgcgatc
gtggccgtcatttcttacaccggatatgatatggaggacgctatgattgttaacaagtcc
tcgtgggagcgcggcttcgcccacggttctgtttataagacggagcttgtagatctgtcc
gagaagttcagaggtgaggacagcgtcgtgtttggggtgacaccaaatgatccgaaagtg
atgaatcaactggatgcagatggaatgccgtttataggctctgtgctgaagtatggagac
cctttctactgctgcgtcaatctcaataccaacaagagtcatgtgactttctacaagagc
caagaagattgtgtggtggacaatatcaaagtatgcagcaatgacaacgggacgggccgc
ttcaaacgcgtctgcatcacataccgcattcccagaaaccccaccatcggagacaaattc
gccagcagacacggtcagaagggtatcctgagtcggctgtggcccacggaggacatgccc
ttcagtgagagtggcatgaccccggacatcctgttcaaccctcacggattcccttccaga
atgaccatcggtatgctcatcgagagcatggctggaaagtccggcgccctccacggcttg
tgccacgacgccacgcccttcaccttctccgaggagaattctgcgctggagcacttcggc
gagatgctgaaggctgcggggtacaattactacggcaccgagcgactgtactccggtcag
agcggcttggagctagaggcggacatctttatcggggtggtttactaccagcgcctgcgg
cacatggtttccgataagttccaggtgaggactacgggagcgagagataaagtcaccaat
cagccgttgggtgggaggaacgtgcagggcggaatcaggtttggggagatggaacgagac
gctttgctggctcacgggtcatcgttcctgttacacgaccggctgtttaactgctcggac
cggtctgtggctcaggtttgcgtagactgcggcagcctgctgtccccgcttctggaaaag
ccgccacctgaatggtcagccatgcggcttagaaagaccgtctgcctgctgtgcgataag
agcgactccatcgagactgtgtccgttccgtatgtgttcagatactttgtggccgagctt
gctgccatgaacattaaagtcaaattagatgtcaagtaa
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