Triplophysa rosa: 130559646
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Entry
130559646 CDS
T09216
Symbol
cdhr1a
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130559646 (cdhr1a)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Cadherin related
130559646 (cdhr1a)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
130559646
NCBI-ProteinID:
XP_057198833
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Position
LG9:complement(17713700..17812954)
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AA seq
883 aa
AA seq
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MLRAQASLSQAAANAVPYVESVGLQPAGSTQTKTFFAFSAQSDYAPYFYDNGPNSSNGNM
ALFSLSEDTLKGTQIYVLNGSDPEGQPVKYGLTFESGSKEYFCVHPQSGEVTLIEELDRE
AQDAIEVFVSISDGLNKVVEKVTVFVLDANDERPQFQNMPSIVDVPENTTSGSSIFKVLA
VDRDTGSGGSVTYSLQSTEPNTKFAIDHNSGVLRIKPGEGIDYEKSRTHFITVVAKDGGG
NYKGKQVMMTSSATLTINVIDIQDTPPMFVGTPYFGYVYEVSSPGSEIFIVFAKDGDIAN
PNPVIYSIDSGADGVFAINKTSGCITLKVYPTQLKRETFNIKVKASEVNPEGKLMDYAVT
TVTIRVVDLNNHPPTFYGENGPQNTFELTMYEHPPVGEFLRGLKITVNDSDQGANAKFHL
RLVGAGRMLRVVPQTVLNEAQVTVLVEDSAGIDFEKSKFLTFKLLAVEIDTPERFSATAD
IIIHLLDTNDNAPKFTSDFYIARIPENSPGGSNVVSVTATDPDSGLWGVVRYSIYGSGAD
LFLIQADSGIIYTQPWASLDAEVKSKYNFYVKAEDTEGKYSLAEVFVTILDLNDHSPAFN
ENSLEKTMIIGAPVKIEAVDEDAEEPNNVIEYSIMKTDPDNIFDIDADTGEIKLKPYIKS
MDIVQNITNQRDCTWSVVVQAKDRGSPSFSTTTIVKIDITEATQLRGPLASFLMKSRENP
MHILGLIGGVIVTVVCVTVLISTVIYIRNIKSNRILPSRRIIRRKCKPRRRENFQQPFRE
ENHGDHFRERGSEIPTVENVNCNNNRSACKHRSPPSPPNAPVPPPLPSHYRKKDRDWTVP
TVSASVASKTKKRSVKEKDNPVNTALVSELKLRLEQKKMANRY
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgctgagggctcaggccagcctgtctcaggctgctgctaatgctgtgccctatgttgag
tctgtgggactccagcctgctggatcaacacaaacaaagacctttttcgcattttcagca
caaagtgactacgcaccttatttctatgataatgggcccaacagtagcaatggtaacatg
gcattgtttagtctttcagaagacacattgaaaggaacgcagatttatgttctaaatgga
agtgacccagaaggtcagccagtcaaatatgggctgacctttgaatctggatccaaggaa
tatttttgtgttcatcctcaatctggagaagtaactttgatagaggagctggacagagag
gcacaagatgcaattgaggtctttgtcagtatctcagatggcctgaataaagttgttgaa
aaggttacagtttttgtactggatgccaatgatgagagaccacagtttcaaaatatgccc
tccatcgtggatgtgccagagaacacaacatctgggagcagcattttcaaagtgttggca
gtagaccgagacacaggttcagggggatcggtcacttactccctccagagcactgaacca
aacacaaagtttgctattgaccacaacagcggtgtgctgaggataaaacctggagaaggc
atcgattatgagaaatctcgcacgcatttcatcactgtagtggcaaaggatggtggtggc
aattacaagggaaaacaagtaatgatgacatcatctgccaccttgacaataaatgtgatt
gacattcaagacactccccccatgtttgttggaacaccttactttggttatgtctatgaa
gtctcctcacctggctctgagatatttatagtttttgccaaagatggagacatagcaaat
ccaaatccagtcatttattcaatagactctggagcagatggagtttttgccattaataaa
accagtggctgtattacactgaaagtatacccgacacaactgaaaagggaaacttttaat
ataaaagtcaaggcatcagaagtcaatccagaagggaaactaatggactatgctgttacc
acagtgaccattcgggtagtggatctcaacaaccatccacccacgttctacggagagaat
ggaccacagaacacgtttgaactaacaatgtatgaacatcctccagtgggagagtttctg
aggggcttgaaaatcacagtcaatgattcagatcagggagcaaatgcaaaattccacctc
agattggttggcgcaggccgcatgttacgggtggttcctcagactgtcctgaatgaagcc
caggtcactgtcctggtagaggattctgctggaatagactttgagaaatcaaaatttttg
acatttaagctcctcgctgtcgagattgacacacctgagagattcagtgctacagcagat
ataatcattcatctactagacaccaacgataacgctccaaagttcacctccgatttttac
attgcccggattccagagaactcacctggaggctccaatgttgtgtctgtgacagccaca
gatcctgattctggtctatggggagtggtgagatactccatctacggttcaggtgcagac
ctgtttctcattcaggctgattctggaatcatctacacccagccctgggccagtctagac
gctgaagtaaaatccaagtataacttttatgtgaaggccgaagacacagaaggaaaatac
agtcttgctgaagtctttgttaccatcctggacctcaatgaccattcaccagcatttaat
gaaaactcactagagaagacgatgattatcggcgcaccggtgaaaatagaggcagttgat
gaagatgcagaggagccaaacaatgtaattgaatactccatcatgaaaaccgacccagac
aacatatttgacattgatgcagatacaggagaaataaagttaaagccgtacatcaagtct
atggacattgtccagaacatcactaaccagagagactgtacctggtctgtggtagttcag
gccaaagacagaggttctccatcatttagtaccactactatagtaaagattgacatcaca
gaagcgactcaactcaggggaccattggcgtcctttttaatgaaaagtagagaaaatccc
atgcatatcctaggcttgattggtggtgtcattgtaaccgtggtttgtgtgacagtcctg
atctctaccgttatatacataagaaacataaagtccaaccggatcctgccctcccggcgc
atcatacggaggaaatgtaaacctcggagacgagagaactttcagcaaccatttcgagag
gaaaatcatggagatcatttcagagagaggggatctgagattcctacagtagaaaacgtc
aactgtaataacaacaggagtgcgtgtaaacatcgatcccctccgtcacctcctaacgcc
cccgttcccccaccgttgccaagtcactacaggaaaaaagacagggattggacggtacct
acagtgtctgcctccgtggcgtccaagacaaagaaaaggtctgttaaggaaaaagacaat
cctgtcaacacggcactggtttctgagctcaaactcagactggagcagaaaaagatggct
aacagatactga
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