Triplophysa rosa: 130559657
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Entry
130559657 CDS
T09216
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tros03009
]
130559657 (ddx21)
03036 Chromosome and associated proteins [BR:
tros03036
]
130559657 (ddx21)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130559657 (ddx21)
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
Pre-60S particles
Helicases
130559657 (ddx21)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130559657 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Gly_acyl_tr_C
Motif
Other DBs
NCBI-GeneID:
130559657
NCBI-ProteinID:
XP_057198842
LinkDB
All DBs
Position
LG9:complement(1556053..1707568)
Genome browser
AA seq
677 aa
AA seq
DB search
MKEEKTAEETDECVSPAPKKIKSEKMNTSDVNGNADASNTKPKKKKQATAETSSDASSAP
PAEASSEDSSSDIEKETPEQREGAFSNFKISQDTVKLLQARGVTYLFDIQVKTFNAVFDG
KDVVGQARTGTGKTFSFAVPLVEKLQMNGDDRRRGRAPKVLVLTPTRELAIQVTKDFKDI
TRKLSVVCFYGGSPYNSQIDAIRNGIDILVGTPGRISDHLKNNKLDLSQLKHVVLDEVDQ
MLDMGFAEQVEEILSVSYIKDAEEKPQTLLFSATCPSWVYDVAKKYMRSQYIHVDLIGKK
TQKTATTVEHLAIACHWSQRASVIGDVIQVYSGSHSRTIVFCETKKDATELSMNTSIKQS
CQSLHGDIAQKQREITLKGFRNGTFEVLVATNVAARGLDISEVDLVIQCSPPKDVESYIH
RSGRTGRAGRTGVCICFYQHKEESQLKFVEQKAGITFKRVGVPTANDIIKSSSKDAMRFL
DSVPPTAVEYFREAARELIEQRGALESLAAALAHISGATNLEQRSLLCSDIGFTTMILNC
STEMNNIGYAWRGLKDQLGEEIDDQIKRMTFLKGKMGVCFDVPVGKAKEIQGKWQDSRCW
QLTVATELPELEQNPRLGGERMSGGFGGRGRGGGRRSFGGGRRSFGGGFKGNGGRGGRGG
QGGRGPQKRTYSQSFDY
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagaagaccgcagaagagacggatgaatgtgtatcacccgctcccaaaaag
atcaagagtgagaagatgaacacatcagatgtgaacggaaacgcagacgcaagtaacacc
aagccgaaaaagaagaaacaggcgaccgcagagacgtcctccgatgccagctcagctcct
ccggcagaagcgtccagtgaagactcgagcagtgacattgagaaagaaacgccggagcag
agagagggagcgttttccaacttcaaaatctctcaggacaccgtcaaacttctgcaggct
cgtggagtgacgtacctttttgacatccaggtgaagacctttaacgcagtgtttgatggg
aaagacgtggttggtcaggcgaggacgggtacagggaagactttctcatttgctgttcca
ctggtggagaagctgcagatgaatggcgatgacaggaggagaggtcgagctcctaaggtc
ttggttctcacgccgacccgagaactcgccattcaagtaaccaaagactttaaggacatc
acaaggaaactctcagttgtgtgtttctatggaggaagcccctacaactcacagattgat
gcaatccgcaatggcatcgatatactggtgggaacgccgggtcgaatcagtgaccacctg
aagaacaacaaactggatctgtctcagctcaaacacgtagttctggacgaggtcgatcaa
atgctggacatgggctttgcagagcaggtggaggagatcctctcggtgtcttacataaaa
gacgcagaggagaaacctcagacgctgctcttctcagccacgtgtccttcttgggtttat
gacgtggctaagaaatacatgagatctcagtacatacacgtagatctcattgggaagaag
acgcagaaaaccgccaccacagtcgagcacttggcgatcgcctgtcactggtctcagaga
gcgtcggtcatcggcgacgtcattcaggtctacagcggcagccacagtcggaccatcgtc
ttctgtgagaccaagaaagatgccactgagctctccatgaacacgtccatcaaacagagc
tgtcagtcgttgcacggtgacatcgctcagaaacagagagagatcacgctgaaaggcttc
aggaacggcaccttcgaagtgttggtggccacaaacgtggctgctcgcggtctggacata
tcagaggtggatctggtcatccagtgctcccccccgaaggacgtggagtcgtacatccat
cgctctggacgaacgggccgagcgggacgaaccggcgtctgtatctgtttctaccaacat
aaagaggaaagccagctgaagtttgtggagcagaaagctggcatcacttttaaacgtgtg
ggggtcccaacagcaaatgacatcatcaaatcctccagtaaagatgccatgaggtttttg
gactccgttccgccaacggcggttgaatattttcgtgaggcagcgcgtgagctgatcgag
cagcggggggcgctggagtcgctggcggccgcgctcgctcatatatcaggagccacaaat
ctggagcagcgctctctcctctgttcggacattggattcaccacaatgattctgaactgc
agcacggagatgaataacatcggttacgcgtggcgagggctgaaggatcagctcggagaa
gaaatcgatgaccagatcaaacgaatgactttcctcaagggcaagatgggtgtttgtttc
gatgtgccggtcggtaaagccaaggagatacagggaaaatggcaggacagccgttgctgg
cagctgacggtcgcgacggaacttccagaactagagcagaacccgcgtcttggtggcgaa
cggatgtccggtggcttcggaggtcggggtcgagggggggggcggcggtcgtttggcggg
ggccggcggtcatttggcggaggctttaaggggaacggcggacgagggggacggggaggt
cagggaggacggggtcctcagaaacgaacctacagtcagtcctttgattattga
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