Triplophysa rosa: 130559734
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Entry
130559734 CDS
T09216
Symbol
ldb3a
Name
(RefSeq) LIM domain-binding protein 3a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tros
Triplophysa rosa
Pathway
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130559734 (ldb3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130559734 (ldb3a)
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130559734 (ldb3a)
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Ortholog
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
LIM_FHL2-3_N
PDZ_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
130559734
NCBI-ProteinID:
XP_057198963
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Position
LG9:14384852..14420898
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AA seq
605 aa
AA seq
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MTTYNVSLAGPSPWGFRLLGGKDFNMPLTVSRITPGSKAALSNLNQGDIIVAIDGVSTEG
MTHLEAQNKIKSANFNMALTMQRSKRPTPLPMATPRIDSPMPMIAHQKDQPVQMNGALSA
SETSRHTNLSYSMSSSGDASLLVQSHLPAPGDKSTSMQKRQQYNSPIGLYSAETLKEMAM
LQERAKNMGSGMPSGTPAEHAPVSTSFAPVCPPTITASSNELLSEPQIANQAPEAEQIPV
QHSVNSFSFQGSSGYTSQYKTSISSAYSQPPPMQPPPMQKPPPPMQHSSIQIPVGPPPPK
VVSTATILPTGYPAPPAPALVHTHAPIPPAPAAPAPASGPPSSRPPWVTDENFANKFDPI
KPTTTNIKVPPLPQAAPPPPAYIPNPVPAPAPAPAAPTPAFNPAPFPPVARGVAQRAERF
AASSRTPLCGSCNSIIRGPFLVALGRSWHPEEFNCHYCHTSLADVSFVEEQNNVYCENCY
GEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYI
ALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHA
HAINV
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgactacttacaacgtgtcacttgctggaccttcgccttggggtttccggttgctggga
ggcaaagacttcaacatgcccctcaccgtttctaggattacaccagggagcaaggcagca
ttgagcaacctaaatcagggtgacatcatcgtggctattgatggagtcagcacagagggg
atgacacacctggaggcccaaaacaagatcaagtctgccaatttcaatatggctctcacc
atgcaaaggtcaaagcggcccaccccacttcccatggctacaccaaggattgactctcct
atgcctatgatcgcccatcagaaggatcagccagtgcaaatgaacggggctctctcagct
tctgagaccagcagacacaccaacctgtcctatagcatgagcagtagtggagatgcgtct
ttgcttgttcaaagtcatttacctgctcccggggacaaatccacatccatgcaaaaaagg
caacagtataactcccccattggtctgtattctgccgagacactaaaagagatggccatg
ctacaggagagggctaagaacatggggtcaggcatgcctagtggtactcctgctgagcat
gctccagtgtctaccagctttgcacccgtctgtccgcctactatcaccgcttcgtccaat
gagctcctttcggagccacagatagccaatcaggcacctgaggctgaacagattccagta
caacattctgtgaacagcttcagctttcaggggtctagtggttacacatcccagtacaaa
acctccatctccagtgcttacagccagcctccaccaatgcagccaccacccatgcagaag
ccaccaccaccaatgcagcacagctccatccagatccctgtaggtccacctccacctaaa
gtggtcagcactgccaccattttacccacaggctacccagctcctccagctccagcactg
gttcacacgcatgctcccatccctcccgctcctgctgcaccagcgccagcctctggccct
ccctccagcagacccccttgggttactgatgagaattttgccaataagtttgaccctatc
aaacccaccacaacaaatataaaagtgccgcctcttccccaggctgctccaccaccgcca
gcctacatccccaaccccgtccctgctcccgccccagctcctgctgcaccaacccccgca
ttcaaccccgccccgttcccacctgtggcccgtggagttgctcaaagggcagagcggttt
gcagccagcagcagaacacctctgtgtggatcctgcaacagcatcatcaggggaccgttc
ctggtagcactgggtcgttcctggcatccagaagagtttaactgccattattgccacacg
tccctggctgatgtcagctttgtggaagagcagaataatgtttactgtgagaactgctat
ggagagttctttgcacctacctgtgcccgctgcaacaccaagatcatgggagaagtgatg
catgcactgagacagacctggcatactacttgctttgtatgcgcagcttgtggaaagcct
tttggaaatagcctgtttcatatggaggatggagaaccctattgtgagaaagattacatt
gctctcttcagcacaaagtgccatggctgtgacttcccagttgaggcaggagacaaattt
attgaagctcttggccatacatggcacgatacttgctttgtttgtgcggtgtgccatgtg
aacctggaaggacaacctttctattccaagaaggacaagcccttatgcaagaagcatgca
catgccatcaatgtgtag
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