Triplophysa rosa: 130559800
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Entry
130559800 CDS
T09216
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tros
Triplophysa rosa
Pathway
tros03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130559800 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130559800 (smarcd3b)
03036 Chromosome and associated proteins [BR:
tros03036
]
130559800 (smarcd3b)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130559800 (smarcd3b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130559800 (smarcd3b)
PBAF complex
130559800 (smarcd3b)
GBAF(ncBAF) complex
130559800 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130559800
NCBI-ProteinID:
XP_057199063
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All DBs
Position
LG1:complement(24183813..24223914)
Genome browser
AA seq
507 aa
AA seq
DB search
MASEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPTVRPGL
NNQAIEPSRKRPAPSQQQSHQQQAVQNRNRKKPVGFSGPNEMPGRQMDMRETQSDPTLGL
NAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRK
LRIYISNTYNPAKPDAEDSEGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDL
YGPDNHLVEWHRTQNTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIH
TQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPP
DPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETI
ESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQ
EAVSRYFYCKIQQRRQELEQVLALRTT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggaggagaccgctggaggagctcgtaaagccaccaagagcaaactatttgag
ttcctcgttcatggagtgcggcctggcatgccatcaggggcacggatgcctcaccagggg
gcaccaatggggcctccaggaccaccatatggaggaagccccacagtacggcctggactc
aacaatcaggccatagaacccagtcgtaaacgacccgctccttcacagcagcagagtcac
caacagcaagccgtacagaatcgaaacaggaagaagcctgtgggattttctggaccaaat
gagatgccagggaggcagatggacatgagagagacccaatcagatcccacacttggatta
aatgccaagaggaggaagatggctgataagatccttccacaaaggattcgtgagctcgtc
ccagagtcccaggcttatatggacctgttggcattcgagcgtaaattggaccagaccatc
atgcgcaaacgggtggacatccaagaagcacttaagagacccatgaagcaaaagcgaaaa
ctgcgtatctacatctccaacacctacaaccctgcaaagcctgatgctgaggattctgaa
ggcagcattgcatcctgggagctacgagtggagggaaaattgctggatgatccaggaaag
ttgaagaggaagttctcctcattcttcaagagtctggtgatcgagctggacaaagacctt
tacggacctgataatcatttggttgagtggcatcgaacccagaacactcaggagacagac
ggttttcaggtgaagagacctggtgatgttagtgtgcgctgcactctgctgttaatgctg
gattaccagccgcctcagtttaaactggatccgagactggctcgtcttctgggtattcac
acacagactcgctccagtattatacaagcactctggcagtatgtcaaaaccaacaaactg
caggactcccatgacaaggagtacatcaactgtgataagtacttccagcagatctttgac
tgtccgcgtctgaagttctctgaaattccacagcgtctcactaatcttctgctgcccccc
gaccctattgtcatcaaccacatcataagcgttgaccctaatgatcaaaagaaaacggcg
tgctatgacattgatgtagaggtggaagatccccttaaagctcagatgagcagctttctg
ctctccacagccaatcagcaagagattgcctcactggataacaagatccatgagactatt
gagtctataaatcagcttaagatccagagagatttcatgctcagcttctccagagatccc
aaaggctacatccaggactggctcaaatcccagagcagagatcttaaacttatgacagat
gttgttgggaacccagaggaggagagaagagcagagttttatcatgagccatggtctcag
gaggctgtcagtcgatacttctattgcaagattcagcagaggagacaggagctggaacag
gttttggctttgaggaccacctaa
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