Triplophysa rosa: 130559846
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Entry
130559846 CDS
T09216
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130559846 (fxr2)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130559846 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
130559846 (fxr2)
mRNA cycle factors
Stress granule specific factors
130559846 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
KH_5
Motif
Other DBs
NCBI-GeneID:
130559846
NCBI-ProteinID:
XP_057199149
LinkDB
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Position
LG1:11371467..11392150
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AA seq
677 aa
AA seq
DB search
MDGVAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPPDYHKDIC
EGDEVEVYSRANEQEPCGWWMARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSP
CSQNSFYKVPIAVPEDLREICLTENIHKDFRKAIGANCIFYSASTQQLIVLSTNESTVKR
AGLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARTYLEFKEDSFQVPRNLVGKVIGKN
GKIIQEIVDKSGVVRVRIEGDNDKKLPREDVGRQGDGRNNTVSGQEGMVPFIFVGTKENI
SNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRSGSGVAGERDRGYLTD
ESTNSLQTTRTYGVRGRGRKPNNVYSGYGTNSELSNASETEETADRDPRPRGVERDDRGS
KRGGRGRGSSAAKGRGGQGPRNTNTISSVLKDPDSNPYSLLEGEGELTGDTDASESMGGN
DHRRRSRRRRNDQEPSVMDATANESDSQAAASENGLEEEGRPQRRNRSRRRRNRGNRPEG
GSASRDRQPGEVTVADFISRPESQSRQNLPGKDETQHATHPKENGTSVSKDDSPSKRSPS
NGVASPGEALTLVNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtggcggtggaggtgcgtggctctaacggggccttctacaagggtttcatc
aaggatgtgcatgaagactcgctcacaatagtctttgaaaacaactggcaaccggagaga
cagctgcccttcagtgacgtgaggttgccgcccccacccgattaccacaaggacatttgt
gagggagatgaggtggaggtttactccagagctaatgagcaggagccctgcggctggtgg
atggcgagggtgaggatgatgaagggagagttctatgtgatcgagtatgcagcctgcgac
gccacatacaatgaaatcgtcacatccgaacgaatacggccagtcaatcccaacagcccc
tgttctcaaaactccttctacaaagttcccatcgctgtacctgaagacctccgagaaatc
tgtttgaccgagaacatccacaaagacttcaggaaagcaatcggagccaactgtatcttc
tacagtgcttcaacacaacaacttattgtcctgtccacaaatgagtccacagtgaagcga
gcaggccttctgagtgacatgcacttccggagtattcgtaccaaactcatgttgatgtcc
cgcaatgaggaggccaccaaacacttagagacaagtaaacagctggcgtctgcgtatcag
gaggaagtgagggtgcgtgaggatctaatgggtctcgccatcggttcccacggtgccaac
atccagcaagcccgcaaagttcccggtgtgactgcaattgagctggaagaggagagctgc
acattcaggatctatggagagaccccagaggcagtaaaacaggccagaacatatttggag
tttaaggaggattccttccaggtacccaggaacctcgtaggcaaagtcattggcaaaaat
gggaaaatcatccaggagattgtggacaaatctggtgtggttcgggtccggatcgaaggg
gacaatgacaaaaaactgcccagggaggatgtaggcaggcagggggatggcagaaacaac
actgtcagcggccaagagggaatggttccctttatttttgtcggaaccaaagagaacatc
agtaatgctcaggccttgctggaataccatgtggcctacctacaggaggtggagcaattg
cgccttgaacgtctacagatagatgaacaactgcgtcagattggggtgggatatcgtgca
ccccccagccgctctggttccggggtcgctggtgagcgtgacagaggttaccttacagac
gagagcaccaactccctgcagaccacacgcacgtatggagttagaggccgtggtcgcaaa
ccaaacaacgtgtactctggttatggaacaaactctgaattgtccaatgcatcagagacg
gaagagacagcagacagagatccaaggccaagaggagttgaaagagatgatagaggttcg
aagcgtgggggtcgtggccgtggctccagtgctgccaagggccggggaggacagggaccc
agaaacactaacactatcagctcagtgcttaaagatccggacagtaacccatactctctg
ctggagggggagggcgagctcaccggtgatactgatgccagcgagagcatgggcgggaat
gaccacaggagacgttcacgtcgtcgccgtaacgaccaggaacccagtgtgatggacgca
accgccaacgaatcggacagccaggcagccgccagcgagaacggactggaagaagagggc
aggccacagcgccgcaatcgaagtcgccgccgccgtaaccgtggcaaccgccctgaggga
ggctctgccagccgtgacagacagccaggtgaggtaactgttgctgacttcatctctcgt
cccgaatcccaaagcagacagaacctcccaggaaaggatgagacacagcatgcaacacat
cccaaggaaaatgggactagcgtgagtaaggacgactcaccctctaagcgttcccccagc
aacggcgtggcttcgcctggggaggctctgaccctggtgaatggcgtttcgtaa
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