Triplophysa rosa: 130559936
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Entry
130559936 CDS
T09216
Symbol
stxbp5b
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-binding protein 5
KO
K08518
syntaxin-binding protein 5
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130559936 (stxbp5b)
Membrane trafficking [BR:
tros04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130559936 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
130559936 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Lgl_C
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
CFAP43_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
130559936
NCBI-ProteinID:
XP_057199299
LinkDB
All DBs
Position
LG10:24742886..24769786
Genome browser
AA seq
1146 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSAAAAASTQTGNRENDMIQETMQSEHFQLCKTIRHGFPYQ
PSSMAFDPVQKILAIGTQSGALRLFGRAGVECYCQHESGSAVIQLGFLVNEGALVSALAD
DSIHLWNLRQKLPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGY
VIMWNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYNYDEA
IHSVAWHHEGKQFVCSHSDGTLTTWNVRAPTKPAQIITPHGKQAKDGKKPEPCKPILKVE
YKTTRAGDSFMILSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDF
QEPYAVVVILEKDLVVIDLAQIGYPIFENPYPLSIHESPVTCXEYIVDCPAEVIPALYSV
GSRQKRQGFSKKEWPINGGNWCQGTLSYPEIIITGHADGSVKFWDASALMLQVLYKLKTL
KVFEKPRAKEEKSSTEIVDEDPFAIQILSWCPESRVLCVAGVSAHIIVYRFSKQEVTTEV
VQLLEVRMQCELNDVESPEGAGEQSTVSTPGTSSSPQSSLPQSHPSTSSNNSSDGLRDNV
PCLKVRSSPLKQSPGYQVELVIQLVWVRGEPPQPITSLSVNSAYGLVVFGNGYGLAVVDY
IQKTLLLNVSTAELYSPSDPHHRQPHSPRKARQPSAGLCDGNDGPAAPEERCKSPTSGSG
SPCNSDEDTKQKFITKVMSKSRLISKSVANDFAKISRKICMIADQKDDARDNSFSRSRSS
SVTSIDRESREVISSFYFCDSLSKKSELVAVPSLWVGTSLGSMLAIALMVPSTPEQRLQQ
SVGISFCGLVARLKGGILRMVQLDSSGILMPHVYEPWYDPNAPEEEKEGPRRRRPTSPLS
SQENQDCQYAVVCSEKQAKVVALPSQNCIYKHNITESSFVLRADVVTVSAGLCLTCFCAN
GHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNQGQALYLTSPTEIQRITYSQETCDN
LQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREDLFGETTAGKASRSLAQHIPGPG
GMEGMKGAASGVVGELARARIALDERGQKLGELEERTAAMMSSADSFSKHAHDIMLKYKD
KKWYQL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcaggaaggtgctggacggcttgactgcggcgtcctcttcctcc
tccgccgccgccgccgcgtccacacagacgggaaaccgggagaatgacatgattcaggag
accatgcagtcagagcacttccagctttgcaagacaatacgacatggctttccctatcaa
ccctcttctatggcttttgaccccgtacagaaaattctggctattgggacacaaagtgga
gccctaaggctatttggccgtgcaggagtggagtgttactgtcagcatgagagcggatca
gccgtcatccagctgggctttcttgtcaatgaaggggcgctggttagtgctttggcagat
gacagtattcatttatggaatctgcggcaaaaactaccagccattctccactcgcttaaa
tttaaccgagaaaggatcacgttttgccatttgccctttcagagtaagtggctgtacgtg
ggcacagaaagagggaacattcacattgtcaatgtggagtccttcaccctctcaggctac
gtgatcatgtggaacaaagccatcgaactgtcctcgaagacgcaccctggacctgtagtt
cacatcagcgacaaccccatggatgaaggaaaacttttaattggttttgagtgtggcata
gttgtgctgtgggacttgaaatcaaagaaggctgattatcgctataactatgatgaggcg
atccactctgtggcctggcaccatgaggggaaacagtttgtgtgcagtcactcagatggc
acgcttaccacatggaacgtgcgcgcacctaccaagccagctcagatcattacaccgcat
ggtaaacaagcaaaggatggaaagaagcccgaaccgtgtaaacccatcctgaaagtggag
tacaaaaccaccagagcaggggattctttcatgatactgagcggaggtttgtcatatgat
acagtgggtagacgagcctgtctgaccgtgatgcatggcaagagcactgcagtgctggag
atggactaccctatagtagatttcctcacgctgtgtgaaaccccatatccaaacgatttc
caggagccttatgctgttgtcgtcatactggagaaggatttagtagttattgatcttgca
caaatcgggtatcccatctttgagaatccatatcccctgtccatccacgagtctccggtg
acctgctgagaatatattgtggactgtccagctgaagtcatccctgcactttactccgtg
ggctccagacagaagaggcagggcttcagtaagaaggaatggcctatcaatggaggtaac
tggtgccagggaacactaagttacccagagattatcatcactggacatgctgatggatca
gtcaagttttgggacgcgtcggcattaatgttgcaggtgctgtataaactaaagacactg
aaggtgttcgagaaaccccgggctaaagaagagaaatccagcactgagattgtagacgaa
gatccgttcgccatccagatcctgtcctggtgtccggagagccgcgtgctctgtgtggct
ggagtctcggctcatatcatcgtctacaggttcagcaaacaggaggtcaccactgaagtg
gttcagctgctggaggtgcgtatgcagtgtgagctgaatgatgtggagtctccagagggc
gcaggtgagcaatccaccgtttccactccaggaacctcatccagccctcagagcagcctg
cctcaatcccacccctccaccagcagcaacaactcctccgacggtctccgggataacgtg
ccctgtctcaaggttagaagttcccccctcaagcagtctccaggttatcaggttgagctg
gtcattcagctggtgtgggtcagaggggagcccccacaacccattaccagcctatctgtc
aactctgcgtatggcctagttgtttttggcaacggttatggtcttgccgtggtcgattac
atccagaaaactcttcttcttaacgtgagcacggctgaactctactcgccatcggatcct
caccacagacagcctcactcaccacgcaaagccagacagccctcggcaggtctttgtgat
ggaaatgacggacctgctgctcccgaagagagatgcaaatccccgacttcaggctccggt
tcaccgtgcaactctgatgaagacaccaaacagaagtttattaccaaggtgatgtccaaa
agcaggctgatctccaagagtgttgccaatgactttgctaagatatccaggaaaatttgc
atgattgctgatcagaaagatgacgccagagacaactcgttcagccgctcgcgcagctcc
agcgtgactagcattgacagggagtcacgcgaggtcatttcctccttctacttttgtgac
tccctgtccaagaagagtgagctggtggcagtgcccagtctgtgggtgggcacatctctg
ggcagcatgctggctattgctctcatggtgccctccacgccggagcagaggttgcagcag
tctgtggggatctctttctgtggtttggtagcgcgtttaaagggagggattttgcgcatg
gtccagctggactccagcggcatccttatgccccacgtttacgagccctggtatgacccc
aacgcccccgaggaggagaaagagggaccgaggagacgccggcccacctcccctctgtcg
tctcaggagaaccaggactgccagtacgctgtggtctgctccgagaaacaggctaaggtg
gtggccctgccctcacagaattgcatctacaagcacaacatcaccgagtcgtccttcgtt
ctcagagcggatgtggtgacggtgagcgctgggctctgcctcacctgcttctgtgccaac
ggacacatcatgaccttgagtttgccgagtttgcggcctctgctggatgtcaactacctt
cccctgacggacatgaggattgccagaaccttctgtttctccaaccagggtcaggccctg
tacctcacatctcccactgagatccaaagaatcacctacagccaagaaacatgtgacaac
ctgcaggagatgcttggagagctgtttactcccgtggagacccccgaggctccaaaccga
ggtttctttaagggcttattcggaggcggcgctcagtccttagacagagaggatctattt
ggcgagacgacagctggcaaggcctcacgcagtctggcgcagcacatcccaggaccgggt
ggtatggagggcatgaagggggcagcgtcgggtgtggtgggcgagttggcgcgggcgaga
atagctctggatgagagaggacagaaactgggcgagctggaggagaggacggcggccatg
atgtccagcgctgactccttctccaaacacgcgcatgacattatgctcaaatacaaggac
aagaagtggtaccagctctga
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