Triplophysa rosa: 130560061 Help Entry 130560061         CDS       T09216                                  Symbol dicer1 Name (RefSeq) endoribonuclease Dicer   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism tros  Triplophysa rosa Brite KEGG Orthology (KO) [BR:tros00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:tros03036]     130560061 (dicer1) Chromosome and associated proteins [BR:tros03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     130560061 (dicer1)    microRNA pathway     RISC loading complex      130560061 (dicer1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Dicer_platform Dicer_dsRBD Dicer_PBD Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer PAZ DEAD Helicase_C ResIII Cas3-like_C_2 SLFN-g3_helicase DSRM_2 dsrm Motif Other DBs NCBI-GeneID:  130560061 NCBI-ProteinID:  XP_057199513 LinkDB All DBs Position LG10:20071098..20094643 Genome browser AA seq 1874 aa AA seqDB search MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK TFIAVLLIKELSHQIRGEDGRRTIFLVNAASSVVQQASTVRTHSDLKVGDYKSEEMTSWP EEMWNREMIENQVLVMTCHIFLHVLRTGVLPLSKINLLVFDECHLAITDHPYRKIMKICE GCPGCPRILGLTASILNGKCDPCDLEQKIQNLEKILQSNAETATDLVVLDRYASQPREVV LDCGLYRDESGLSERLLSELDEALHFLTDCNLTARREDRDPTFISKQVLNDCRAVLAVLG PWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLDLKFVT PKVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEAEAKEKPEANF PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPRNKQM EVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR APVSNYIMLADSERTKSFEEDLKTYKAIEKILRNKCSKSAECSDFELEPVNDDDNVLPPY VLRSEDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCKTVELKTGGYQSILFLPINSP LRVPVPGPIMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEET NVPGRPGSTKRRQCYPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYP PEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSVFTLSAEQLELITRLHQYIF SHILRLEKPALEFKPTEADSAYCVLPLNVVEDSNTLDLDFKFMEEIEKSEARIGIPNTKY TKQNPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKT KYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV PELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGSQTLPPDFRYPNL DFGWKKSIDSKSFISYQSACMDNNDHCKHHTSSDSDHTACSTEASQPPEGALPCKNCNTP DEKLENVLPVTNLQTPNHDESTWVCSRNLPNGTRGGDDLSHSHDICQCSQPGSESNLSTQ TTTSVQARLSPASEPQARPGDECTPGGNSDLCGGHVKKPTSYRCPKPETATSTTAPSTVS SEISDVTSASACEPPAWDSPKMLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHGI TTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVV NQDKSSTDKWDSDENKDLANGKASEDEDEDDDEGVEDEPPKEEVNTEEEDLEYYDEHIKF IDNMLMGSGAFGKKISLQPPEPWYEWKAPKKAHHAHFAPDGSADEFDYSSWDAMCYLDPS KAGEEDDFVVGFWNPSEENCGTDIGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCG ERAAQLFLCSLGLKVLPVEQQSSGRSAELQYGRLKIPPRCMFEHPDAERTLNHLISGFEN FERKISYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSE LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSAN VPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRA LRSLKANQPQVQNN NT seq 5625 nt NT seq  +upstreamnt  +downstreamnt atggctggcctacagctggtgacccctgcctcctcacccatggggcccttcttcggtctc ccgtggcaacaggaagcgatccatgacaacatatacacaccgaggaaatatcaggttgaa cttcttgaagcagctcttgaacacaatactatagtctgcttgaacactggctcagggaag acctttatcgcagtgctcctaatcaaggaactctcccatcaaatccgtggagaggatggg aggagaaccattttcctggtaaacgcagcatcatctgtggttcagcaagcatctactgtc agaacccactctgatctcaaggtcggcgactacaagtctgaggaaatgacatcatggccc gaggagatgtggaacagagagatgatagagaatcaggtgctggtgatgacgtgtcacatc ttcctgcatgtgttaaggacaggagtcttgccactatcaaaaatcaacctgctggttttt gacgaatgccacctcgcaatcacagaccatccttatcggaaaataatgaagatttgtgag ggctgtccaggctgtccccgcattctgggtctgaccgcttccattttaaatggcaaatgt gacccatgtgacctggagcaaaagattcagaacctggagaagattctgcagagcaatgca gaaaccgccactgatcttgtggtgctggataggtatgcgtcccagcctcgtgaggtggtg ctggattgtgggctgtaccgggatgaaagtggtctctctgagagactcctgagcgagctg gacgaagcccttcattttcttactgactgcaacttaactgctcgtcgtgaagatagagat cccacattcatctccaaacaggtgctgaatgactgtcgagccgttctggccgtgctgggc ccgtggtgcgctgataaagcagcaggaatcatggtccgcgagctgcagaaatacatcaaa cacgagcaggaggagctgaatcgtaaattcctgctgttcacggacaccattttgagaaaa atccatgccttgtgtgaggagcatttctccccagcttccctggacctgaagttcgtcact cccaaagtcatccgacttctggagatcctccacgagtacaaacctttcgaacggcagcag ttcgagagcgtggagtggtacaacaatcgcaatcaggacaattatgtttcatggagcgat tccgaggatgaagatgaggatgaggaggcagaggcgaaggagaagccagaggctaatttc ccctcacccttcaccaacatcctctgtggaatcatctttgtggaaaggagatacacagcg gttgttttaaacagacttattaaggaggcaggcaagcaggaccctgagctggcctacatc agtagcaacttcatcacaggtcacagcattggcaagaatcaacctcgcaacaaacaaatg gaggtggagttcagaaaacaagaagaagtcctgaggaagttcagagcccacgaaaccaac ttgctcattgcaaccagcattgtggaggaaggggtcgatattccaaagtgcaatttggtc gttcggtttgacttgccaacggaatacagatcgtacgtgcaatccaaaggtcgtgcccgt gctccggtctccaactacatcatgctagctgacagcgaacggacaaagtcatttgaagag gacctaaaaacctacaaggccatagagaagattctcagaaacaagtgctcaaagtcagcg gaatgcagtgattttgaattggagccggtgaatgatgacgacaatgttctcccaccttac gtcttgcggtcggaggacggcggcccccgcgtcacgattaacacagccattggacacgtc aacagatactgtgcacgtttgcccagtgacccgtttactcacctcgctccaaagtgtaaa accgtggagctgaagactggcggttatcagtcgatactattccttcccatcaactctcca ctaagagttcctgtccctggtccaataatgaactgtgcaagacttgctgaaaaagccgtc gctcttctctgttgtgaaaaactgcacaaaattggcgagctggatgatcatttaatgcct gtggggaaggaaactgtgaagtatgaggaggagctggacctgcatgatgaagaggagact aacgtgccaggtagaccaggctccaccaaacggagacagtgttacccaaaagccatacca gagtgtctgcggggttgttaccccgtaccagagcagccttgctatttgtacgtgatcggt atggtcctcaccacccctcttccggatgagcttaactttcgccggagaaagctgtaccca cctgaagacaccaccagatgttttggcattctgacagctaaaccaatacctcggatccct cacttcccagtctacacacgttccggtgaggtgaccatctcgatcgagctgcaaaagtcc gtcttcactctgagtgcggaacagctggagttgatcactcgcctgcaccagtacatcttc tctcacatcctccgtctagaaaagccggcactggagttcaaacccaccgaggcggattct gcctactgcgttctacctctcaacgtcgttgaggattccaatacgctggacctggatttc aagttcatggaagagattgagaagtccgaagcacgcatcggcattccaaacacaaagtac accaagcaaaacccatttgttttcaaattggaagattaccaagatgcagtcattattcca aggtatcgtaattttgaccagccgcaccgcttttacgtggctgacgtttacacagacctc accccgctcagtaaattcccatccccggagtacgagactttcgctgagtactacaaaact aagtacaacctcgacctctccaacgttaaccagcctctgttggatgtggaccacacatct tcaagattgaatcttttaactccacggcaccttaatcagaaggggaaagcccttcctctt agcagcgccgagaagagaaaggccaagtgggaaagcctgcaaaacaaacagattttagtt ccagagctctgtgccattcaccctatccctgcctcgttgtggaggaaagccgtctgcctt cccagcatcctctatagacttcactgccttctgacggccgaagagctgcggtctcagaca gccatcgatgctggggtaggatctcagaccctgcctcctgacttcaggtatcctaatttg gatttcggatggaagaaatccatcgacagcaagtctttcatttcctatcaaagcgcatgt atggacaacaatgatcactgtaagcaccacacaagctcagattcagaccacactgcctgc agcacagaggcctcccagcctccagagggcgctctcccctgtaaaaactgcaacacacca gatgaaaagctagaaaatgtgctccctgtgactaatctccagacgccgaaccatgacgag agcacctgggtctgttccagaaacctcccaaacggcactcggggcggtgacgacctttcg cactcacatgacatttgccaatgctctcagccgggctcggagagcaacctatcgacgcaa accactacctcagttcaagcgcgtctctctccagccagcgagccacaggcccggcccggt gatgaatgtaccccaggcgggaactcggatctctgcggcggacatgtgaaaaaacctacc tcataccgttgccccaaaccagagaccgcaaccagcaccacagcaccttctaccgtgtca tcagagatctcagacgtgacgtcagcatccgcctgtgagcccccggcttgggattctccg aagatgttgggccccaatcctggcctcatcttgcaggctctgaccctctcaaatgccagt gatggcttcaatctggagaggttggagatgctgggtgactcttttctgaaacacggcatc accacctacctgttctgcacatatccggatgcccacgagggccggctgtcgtacatgaga agcaagaaggtcagcaactgtaacctttatcgtctgggaaagaaaaaaggcctccccagc cgaatggtggtctccatctttgacccccctgtaaactggcttcctccaggctacgtcgtg aatcaggacaaaagcagcacagacaagtgggactcagatgagaataaggatttggccaat ggaaaagccagcgaggatgaggatgaagatgatgatgaaggtgtcgaggacgagccaccc aaggaagaggtgaacacggaggaggaggatttggaatattacgatgaacacatcaagttc atcgataacatgctgatgggctccggagccttcgggaagaaaatctctctccagccgccc gagccctggtatgagtggaaagcacccaagaaagcccaccacgcccatttcgccccagac ggttctgctgacgagttcgactacagttcctgggacgccatgtgctaccttgaccccagc aaagcgggcgaggaggacgactttgtggttggcttctggaacccttccgaggaaaactgt ggcacagatattggaaagcagtccatatcctatgacctccacactgagcagtgcatcgct gataagagcatagccgactgtgtggaagccctgctggggtgctacctcaccagctgcggg gagcgtgcggcccagctgttcctctgctccctcgggctgaaggttctgccagtggagcag cagagttctgggcgctcggccgagctgcagtacggcaggcttaagattcctccccgctgc atgttcgagcacccggatgccgaacgcaccctcaaccatcttatttcgggctttgagaac tttgagaggaagattagctacacgtttaaaaacaaggcttatcttctgcaggcgtttacg catgcctcgtatcattacaacaccattacagattgttatcagcggttggagttccttggt gatgcaattttagactacctcataactaagcacctttacgaagacccacggcagcactcc ccaggcgtgctgaccgacctgcgttctgcgcttgtcaacaacaccatatttgcttccctg gccgtcaagtacgattatcacaagtacttcaaagcggtatcgcccgaactgttccacgtg atcgacgattttgtgcaatttcagctggagaaaaacgaaatgcaaggaatggattcggag cttcgcagatcggaggaagacgaggagaaggaggaagatattgaggtccccaaagcaatg ggtgacatcttcgaatcgctagccggtgcaatttacatggatagtggcatgtcgcttgag acagtttggcaagtgtattatccaatgatgaggccactcatagaaaaattctctgctaat gtccctcggtccccggtgcgtgaactcctggagatggaaccagagacggcaaagttcagc cctgccgagagaacctacgatggaaaagtacgggtcacagtggaggtggtggggaaaggc aagtttaagggtgtgggccgcagctaccggatagccaagtcagcggccgcccgccgagct ctgcgcagcctcaaagccaatcaaccccaggtccaaaacaactga

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