Triplophysa rosa: 130560075
Help
Entry
130560075 CDS
T09216
Symbol
syncripl
Name
(RefSeq) synaptotagmin binding, cytoplasmic RNA interacting protein, like
KO
K13160
heterogeneous nuclear ribonucleoprotein Q
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130560075 (syncripl)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
130560075 (syncripl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130560075
NCBI-ProteinID:
XP_057199546
LinkDB
All DBs
Position
LG10:2182875..2190234
Genome browser
AA seq
568 aa
AA seq
DB search
MASEHINGNGTDESVESSPAPAHSEHFQLLLDAGLPRKVAVKLDEIYMAGLVSHSDLDDR
AIEALKEFNEEGALQVLLQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVSDSSKGPD
EAKIKELLERTGYTLDVTTGQRKYGGPPPGSTHAGVQPTVGTEIFVGKIPRDLFEDELVP
LFEKAGPIWDLRLMMDPLSGLNRGYAFVTFCTKEAAQEAVKLCNNNEIRPGKHIGVCISV
ANNRLFVGSIPKSKTKEQIVEEFAKVTEGLNDVILYHQPDDKKKNRGFCFLEYEDHKTAA
QARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLASTVSEEHLEKTFCP
FGKLERVKKLKDYAFIHFEERDGAVKALAEMHGKDLEGEQIEIVFAKPPDQKRKERKAQR
QAAKTQMYDDYYYYGPPQVHPSSRGRGRGVRAAYSYPHDYYSYRDYYDYYGYDYHNYRGG
YDDPYYGYEDFQAHFRGTGSRGARGPTLSRGRGSGMARGRAGYSQRGGVASGRGGRGSRG
GIQQRCRVAPCGRNGPKVCTFPSFVTVS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggagcatataaatgggaacggtacggatgaatcagtggagtcttcaccagct
cccgcccattcagagcatttccagctgttattagacgcaggcttaccgagaaaagtcgct
gtcaaactagatgaaatttacatggcaggtttggtgtcacacagcgatctggacgatcgg
gcgattgaagctctgaaagagtttaatgaagaaggcgcgctgcaggttctcctgcagttt
aaagacagcgacctgtcacatgttcaaaataaaagtgcctttctgtgtggagtgatgaag
acatacagacagagagagaaacagggcaccaaagtgtctgattccagtaaaggacccgat
gaggccaaaatcaaagagttgcttgagaggacgggttatacgctggatgtgacgacaggt
cagcggaagtatggcggaccgcctccaggatccacacacgctggagttcagcccactgtc
ggcacagagatatttgtaggaaagatcccgagagatctctttgaagacgagctggttcct
ctctttgagaaagccggacccatctgggacctgcgtctgatgatggaccccctcagcggg
ctgaaccgaggatacgcttttgtcacattttgcactaaagaagcagcgcaggaggccgtc
aaactctgcaacaacaacgagattcggcccggtaaacacattggtgtttgcatctctgtt
gccaataatcgtctgtttgtgggttccattcccaagagcaaaactaaagagcagatagtg
gaagagtttgccaaagttaccgagggtttgaatgatgtcatcctgtatcatcagcccgat
gacaagaagaagaatcgaggcttctgtttcttagagtatgaagatcacaaaacagccgcc
caggcacgccgacgcttaatgagcggcaaggtgaaggtctgggggaatgtggtgaccgta
gagtgggccgaccccatcgaagaccctgaccctgaggtcatggcaaaggtcaaagtcctt
tttgtaagaaacctggcgagcacagtatcagaagaacatctggagaaaacgttctgtccg
tttggcaaactggagagggttaagaagctcaaggattacgcctttattcatttcgaggag
cgtgacggtgcggttaaggctttagctgaaatgcacgggaaggatctggaaggggaacaa
atcgaaatcgtctttgctaagccgcctgatcagaagaggaaagaacggaaggcccagaga
caagctgctaaaactcaaatgtatgatgattattattattacgggccgccacaagtgcac
ccttcatcacgaggcagaggacgaggtgtgagagcagcttattcctaccctcacgactat
tacagctacagggattattacgactactacggctacgactatcacaactacagaggaggc
tacgacgatccgtactacggctatgaagactttcaagctcactttagaggaacgggcagc
agaggagctcgcgggcccacactgtctaggggccggggctccggcatggcaaggggacgg
gccggatactctcagcgcggaggtgtggcatccggacgaggtgggcgtggctctagaggt
ggcatccagcagcgatgtcgagtggcaccgtgtgggcgaaacggaccaaaggtttgcact
tttccttcatttgtcacagtctcataa
DBGET
integrated database retrieval system
