Triplophysa rosa: 130560294
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Entry
130560294 CDS
T09216
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130560294
Transcription factors [BR:
tros03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130560294
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
130560294
NCBI-ProteinID:
XP_057199975
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Position
LG10:complement(23918361..24153525)
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AA seq
995 aa
AA seq
DB search
MIRIFPDFSVQVTAAAASAGGGAGGGMPAASRVPVATNGNPQSVQGLTSYQQSSVLWDGS
GADDVKSFSTFLHSEPYWERSANASSCSASRPKTLHLGGQQHTSSPWLQALRKEKSRDAA
RSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEG
PPPNTSVKAIGSQRRRSPGAVAAEIFEPHLGSHILQSLDAFVFALNKEGRFLYISETVSI
YLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQSAGAEDGASSASSSSHS
ETPEPVESSSPSLLSPDNTLERSFFIRMKSTLTKRGIHIKSSGYKVIHITGSLRIRMALT
HSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLNIIFCENRISDYMDLTPV
DIVGKRCYHFIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKSGGYIWIQSSATIAINAK
NGNEKNVIWVNYVLSNLEYKDIPIDIAQLPSLPEKTSESSETSDSESESKENSEDNDNSK
SGGKGNPSSENSEDPESDSKKQTGEPPEQEMRRQEEGDSSSNPESQDSEDSLEPSDCETD
HKEGHLGRLGGLHIKVERYGDVEELRDSPSSSSSEEEEDDEDEIVKECNSAGELSGPAMS
RHQKRKKRRKKQRWDGSRQRLRLSPTATHSPGGMDPTLGDQPPLLLPPSPTSASVLKIKT
EMSEPINFDNDSSIWNYPPNREISRNESPYSMTKPHDTFPSPQPAGPQVSIPESVLTPPG
AESGGGSRKPNFNGNGSSANNAPTAVASATPGSLALPSSSSTADPLSPPLSASPRDKLQG
TPTSSGSLLYTSDLEALQRLQAGNVVLPLVHRVTGTLATSTASPRVYTTGTIRYAPADVS
LAMQGNLLPNAHAAVNFVDGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGAVGGAGLTQMP
AANVFTTAEGLFSTLPFPVYTNGIHNTHTLERKED
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcagcggcggcgtctgcaggt
gggggagccggtggagggatgccggctgcgtccagagtcccggtagctaccaacggaaac
ccgcaaagcgtccaaggcttgacctcttaccaacaaagcagtgtattatgggatgggtca
ggggctgatgacgttaagagcttttccacgtttctccacagcgagccatactgggagagg
tctgctaatgccagttcctgctctgcctctaggcccaagacactccaccttggagggcaa
caacatacctcatcgccatggttgcaggctctgaggaaggagaagtcacgtgacgccgcc
cgctcgcgccggggcaaggaaaactttgagttctacgagctggcaaagatgcttcctctt
cccggcgccatcaccagccaacttgacaaggcgtccatcattcgtctcaccatcagctac
cttaaaatgagggacttcgccaaccagggagacccgccgtggaacctgcgaatggaagga
ccgccacccaacacctcagtcaaagctatcgggtcccagcggaggcggagccctggcgct
gttgccgcggagatctttgagcctcaccttggaagccacatcctgcagtccctggatgca
tttgtatttgcactaaacaaggagggaagatttttgtacatctccgagacggtgtccata
tacctggggctttcacaggtagagctgacgggcagcagcgtgttcgattacgttcatccg
ggcgatcacgtggagatggccgagcagctgggaatgaagttaccgccgggaagagggctg
ctgtcccagagcgcgggggccgaggacggggccagctccgcctcctcatcttctcattct
gaaacacctgagccagtggagtccagcagtcccagtcttctgtctccagataacactctg
gaacgttccttcttcatccgaatgaagtccacgctaaccaagagaggcatccatattaag
tcttctggatacaaggtgattcacattacgggcagcttgaggataagaatggcattaacg
cacagtcgttcggtacccaatcagatcatgggcatggttgtggtcgcacacgcgctccct
ccgcccaccatcaacgaggttcggatcgactgtcagatgtttgttacacgggtcaacatg
gatctcaatatcatcttctgtgaaaacagaatcagcgactacatggacctgacacctgtc
gacatcgtcgggaagagatgttatcacttcattcacgcagaggacgtggaaggcattcgg
caaagccatttagacctaatgaataaaggacagtgtgtgacaaagtactatcgctggatt
caaaagagcggaggttatatctggatccagtccagcgccactattgcaatcaatgccaag
aacggcaacgagaaaaacgtaatctgggtcaactatgtacttagtaatctggagtacaaa
gacatacccatagatatcgcacagttgcccagcctgccggagaaaacatcggagtcttcg
gaaacatcggattcagaatcagagtccaaggagaactcagaagacaacgacaactccaag
tcaggtgggaaaggaaacccgtcttccgagaacagcgaggaccccgagtcggacagtaag
aaacagacgggcgagccgccagagcaggagatgagacgacaggaggaaggagacagttcc
agcaatccagaaagtcaagacagcgaagacagcctggaaccatccgactgtgaaaccgac
cacaaggaaggacacttgggtcgactgggcggcttacacataaaggtagagcgctacggc
gacgtagaagaactgcgggactcgccctcctcttcctcttcggaggaagaagaggacgat
gaggacgagatcgtgaaggaatgcaacagcgcaggagagctaagcggaccggcaatgagc
agacaccaaaagagaaagaagagaaggaaaaagcagagatgggacggaagtcggcagcgg
ctgcgtctgtcgcccaccgccactcacagccccggcggcatggaccccaccctcggagac
cagcctccccttttgctcccgccctccccgaccagtgcctccgtgctcaagatcaagacc
gagatgtcagagccgataaacttcgacaacgacagcagcatctggaactacccgcccaac
cgagagatctcccgcaacgaatccccctacagcatgacgaaaccccacgacaccttccct
tccccccagcctgccggtccgcaggtgtccattcccgagtctgtcctcactccacctggt
gccgagagcggaggaggcagcagaaagcccaacttcaacggcaatggtagcagcgccaac
aacgcccccaccgctgtggccagcgcaaccccgggcagcctggctcttccttccagttcc
tccacggctgaccccctctccccacctctgtcggcctcgccgcgggacaagctgcagggc
acgcccacctcttccggctccctgctctacaccagtgaccttgaagccctgcagaggtta
caagcgggtaacgtggtgctcccgttggtgcacagagtcactggcacactcgccaccagc
acggcctccccacgagtctacaccactggaaccattcgatacgccccggcagacgtcagc
ctggccatgcagggcaacctcttgcctaacgcccatgctgctgtgaactttgtggatggg
cccggtttcggcatagaccccaagacacccatggagatgctgtaccaccacgtgcaccgg
ctcaacatgtccacgccctttggcggagcggtcggcggagcagggctgacgcagatgccc
gctgctaacgtcttcaccacggcagaaggactcttctccacgcttccattcccagtctac
accaacggcatccacaacacacatactctggagcgcaaggaggattga
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