Triplophysa rosa: 130560405
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Entry
130560405 CDS
T09216
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130560405 (sox19b)
Transcription factors [BR:
tros03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130560405 (sox19b)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130560405
NCBI-ProteinID:
XP_057200131
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Position
LG1:complement(14195229..14198314)
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AA seq
293 aa
AA seq
DB search
MMYSMMEHEMKTAGQPHCHQNSPGMSSPVSGVGNAHAGSKTSCPQGEDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKSLTDAEKRPFIDEAKRLRAVHMKDYPDY
KYKPRRKTKSLLKKDNPIGKYPLAAGNLLASAVAQGQGGSPRMDSYGWGHTGGYMAMQGE
TLGYPQQLHRYDLSALQYPTAQTFMNGASPYSQMSYSGSPQQPSPVMSMVKPEPLSHSPT
GAPNHHRGPFQGDLRDMISMYIPGSDASDGSTQRAYSGVQQHYLGGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagcatgatggagcatgaaatgaaaactgcaggtcaaccacattgccaccag
aacagtccgggaatgtcttctccagtcagcggggttggaaatgcgcacgccggatcaaaa
acgtcttgtccgcagggcgaagaccccatggacaaagtcaagcgtcccatgaatgcgttc
atggtgtggtctcggggtcaacgaagaaagatggctcaggagaatcccaaaatgcacaac
tcggagataagcaaacgcctcggggcggaatggaaaagtttaacggacgcagagaagcgg
cctttcatcgatgaggccaaacgattgcgagcggtacacatgaaggactaccccgactac
aaatataaaccccggcgcaagactaaatctcttttgaagaaagacaatcccataggtaaa
tatcctctagcagccggcaacctgttggcatccgccgtggcacagggacaaggaggtagc
ccgagaatggacagttatggctggggtcacacaggtggttatatggccatgcagggtgag
acgctgggatacccgcagcaactgcaccgctacgatctgtcagctcttcagtatcccaca
gcacagacgttcatgaacggtgcaagcccttacagccaaatgtcatatagtggaagccct
cagcagccgagtccagtgatgtcgatggttaaaccagaacctctgtctcattctcctact
ggagcaccaaatcaccaccgtgggcctttccaaggggacctgagggacatgattagcatg
tatataccaggtagtgatgccagcgacggctcaacccagagggcttactctggtgtccag
cagcactatcttggtggaactgttcccctcactcacatctga
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