Triplophysa rosa: 130560693
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Entry
130560693 CDS
T09216
Symbol
syne3
Name
(RefSeq) nesprin-3
KO
K21761
nesprin-3
Organism
tros
Triplophysa rosa
Pathway
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130560693 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130560693 (syne3)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
130560693 (syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
KASH
SYNE3
Spectrin
SR_desmoplakin_3
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
130560693
NCBI-ProteinID:
XP_057200652
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All DBs
Position
LG10:complement(21754933..21771149)
Genome browser
AA seq
1118 aa
AA seq
DB search
MTQHEQHEFRESLEEALSWMQAIQEKLKQNDNTQGPRTALEARLRETEKIHSSETEGHVK
MDRVLVASEALLRNGDEEMKNQTHSKLKDLKALWDETLTYIIHCHSRIEWVWLHWSEYLK
AHEEFGMWLEKMHRSLEPQLELQLGPQEKLWQVDHLRVLHSDIQAQGQFLERLLDEAAAL
FNRTQDPSVDEQAQQGLQDAYNHIQNIAQERLALAEKRAEEHQQYKSCVHKFQTWLVSRT
EEVSRFRDMEDTTQNRLKALQEMDANIAKEELTLQHIVGLCEAVKTNTSPAGAERITEEM
EELRLAWQRLRLALAEVHEELQSSLDSESEYSNGCKELRVDLAKLRTQVQNLSVELESRD
RERTEDHLVAQWKTRTGVRNKLVAEEPNVEQLKSRLKELFRFPQDSRALSDEMLAVVKEY
QSVKGRSFRLSSESESTLRQILQDPLLRFSQWSQAVSQVLEASADVTEFSHIALLVQNIE
KLLKTSLQLQERLTLLQVKSDLLSSVFGQEKADDLLKELSGDMRKRESLHSQLQERKSRL
QGFISKTKDFSEAYDSIHKKLSFIKERFYAANGLQPDILAKKSQADQLRVIRKDLEDCEA
HILALETLVSSNPTNATKFEGLYADWKLLYNAVRIKVNESEEHIVDHELFHDNILNLEKW
LMIMRQKLESFRGGNGEWGIDNRQQEAERALGEFTENELQLHQMEAQGHNVLAKTSDEGK
VHIRQDLNRLRESWVSLHTLSLNLYRLLNGQDSLSHRTECLDRWADGRHEGSGSGAASGF
EGGHLATGDEGTGQRRHHKLDSQFHLQSESTDYPKTIEATQNQFLVVSPEGIERPGRPQI
WRREMSYHERTLDDEVDAVTSGGDGRANRKQIEAADTDRSNLLGKSESRSADRTGEWVEE
HIAGAHTDDAKRRLWPSQIPPDEITVAYSSVGDTQIGFQGPRQHVDTGMLRREFEAYLLK
ENDKLTKILNSQSASSAKELTTRQDTLKGLRAGVSWGQSQFQKLMENKSPDEDVEDLRYR
WMLYKSKLKEAGDLRALKKNKGASAQGQGLVRAGKKNSSPGFLYRVCRVALPLQLLLLAL
LLLAFLLPMMDEGKSCSLCNNFARSFNIMLRYDGPPPT
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacacgagcagcatgagttcagggaaagtttggaggaagccctgtcctggatg
caggccatccaggagaagcttaagcaaaatgataacacccagggtcccagaacagcactg
gaggccagactcagagagacggagaaaatccatagctcagagactgaaggccatgtgaag
atggacagggtgctggtggcgtctgaagctctgctccgaaatggagacgaagagatgaag
aatcagactcattccaaactgaaggatctgaaagcgctgtgggatgagacattaacctac
ataattcactgccacagtcgcatcgaatgggtttggcttcattggagtgaatacctgaag
gctcatgaggagtttgggatgtggctggagaagatgcaccggtctctggagccacagctt
gagctgcagctgggtccgcaggagaagctgtggcaggttgaccatctgcgagtcctgcac
agtgacattcaggcccagggtcagtttctggagaggcttctggatgaggctgcagcgctt
ttcaaccgcactcaagatcccagtgttgatgagcaggctcaacaaggccttcaagatgcc
tacaaccatattcaaaacatagcacaggaaaggttggcattggcagagaaaagagcagaa
gagcaccagcagtacaaaagttgtgttcataaattccaaacctggcttgtgtctagaaca
gaagaagtcagtcggtttcgcgacatggaggataccacgcaaaatagactcaaagccctg
caggaaatggatgccaatatagccaaagaagagctcacactccagcacattgtaggattg
tgtgaggcggtgaagaccaacacatctccagcgggagcagagaggatcacagaggagatg
gaggagttgaggttggcctggcagaggttacgtctggcgctagctgaggttcatgaagag
ctccagagctcactggactccgagagcgagtattcaaacggctgtaaggagctgagggtg
gacctcgcgaagctcagaacccaggtccagaacctcagtgttgagctggagagcagggat
agagagaggacagaggatcacctggttgctcaatggaagactcgcacgggtgtgcgtaac
aagctcgtcgcagaggagcctaatgtggagcagttgaaatctcggttaaaagagcttttc
agattcccacaggactccagagcgctgtctgatgagatgctcgctgtggtaaaggagtac
cagagtgtgaaaggcagatcgttcaggttgtcctcagagagtgaatcgacgctgcgacag
atactgcaggaccctttgctcaggttcagccagtggagtcaagcggtttcgcaggtcctg
gaagcttctgccgacgtgactgagttctcccatatcgctctgcttgtacagaatatcgag
aagttactcaagaccagcttgcagctgcaggagcgtttgactttgcttcaggtgaagagc
gatcttctcagctctgtttttgggcaggagaaagccgatgatctgttaaaggagcttagc
ggagatatgaggaagagagaatcgctccacagtcagctccaggaacgcaagagtcgtcta
cagggatttatatcaaagacaaaggacttttctgaggcttatgactccatacacaaaaag
ctgagcttcataaaggagaggttctatgcagcgaatggcctccaacctgatattctagca
aagaagagtcaggcggaccagctcagggtcattaggaaagatttggaggattgcgaggcc
catattttggcccttgagacgctggtgtcatccaacccaacaaacgccaccaagtttgag
ggtctatatgcagactggaagttgctatacaatgcagttcggattaaggtgaatgaaagt
gaggagcacatagtggaccatgaacttttccatgacaatatcctgaatttggagaagtgg
ttaatgatcatgagacagaagctggaatcgttccgtgggggaaatggagaatggggcatc
gataaccggcaacaggaggcggagagggcgctaggggagtttacagaaaatgagcttcag
ctgcaccagatggaggctcagggtcacaatgtgctggccaagacctccgatgagggcaaa
gttcacattcgacaagaccttaatcgcctccgagaatcctgggtgtccctccacacgctt
agtctcaatctttacagacttctgaatggacaagactccctgtcacacagaaccgagtgt
ctggatagatgggcggatgggcgtcacgagggctcaggatctggagcagcatccggcttt
gaaggtggacatctagccacaggtgatgagggaacaggtcaacgtcgacatcacaagctc
gattcacagttccacctgcaatcagaatcaacagattacccaaagaccatcgaagcgact
caaaatcaatttctagttgtgtcccccgagggcatcgaaagaccaggacgtccacagatc
tggagacgagagatgagttaccatgagaggaccctggatgatgaggtggatgcagtcact
tctggaggtgatggtagagcaaacagaaaacagattgaggcggcggatacggacagaagt
aacttgcttgggaagagtgagagcaggagtgctgataggactggagaatgggttgaggag
catatcgcaggagcccatactgatgatgcaaaaagaagattgtggccatctcaaattcca
cctgatgaaatcactgtggcttacagctcagttggtgacactcagattggctttcagggg
cctcggcagcatgtcgacacagggatgctgaggagagagtttgaagcatatcttctcaaa
gaaaatgacaagctcacaaaaattctgaacagccaaagcgcctcgagtgccaaagaactg
accacgagacaggatacactcaagggtttgcgtgctggtgtgtcctggggtcaaagtcaa
ttccagaagctaatggagaataagtcacctgatgaagatgtggaggatctgcgatatcgt
tggatgttatacaagtccaaactgaaagaggctggtgacctcagagctctgaagaaaaac
aagggtgcaagtgcacaaggacaggggcttgttcgtgctggaaagaagaacagcagcccc
gggttcctgtaccgcgtgtgtcgcgtggctcttcctcttcagctcctgctattggccctg
ctgctgttggcctttcttctacccatgatggatgagggcaaaagctgctcgctgtgtaac
aacttcgcccgctcattcaacatcatgctccgctacgacggaccaccacccacttaa
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integrated database retrieval system
