Triplophysa rosa: 130560712
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Entry
130560712 CDS
T09216
Symbol
xpo1b
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
tros
Triplophysa rosa
Pathway
tros03008
Ribosome biogenesis in eukaryotes
tros03013
Nucleocytoplasmic transport
tros03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130560712 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
130560712 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130560712 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130560712 (xpo1b)
03009 Ribosome biogenesis [BR:
tros03009
]
130560712 (xpo1b)
03016 Transfer RNA biogenesis [BR:
tros03016
]
130560712 (xpo1b)
03036 Chromosome and associated proteins [BR:
tros03036
]
130560712 (xpo1b)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130560712 (xpo1b)
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
130560712 (xpo1b)
Pre-60S particles
130560712 (xpo1b)
Transfer RNA biogenesis [BR:
tros03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130560712 (xpo1b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130560712 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
130560712
NCBI-ProteinID:
XP_057200686
LinkDB
All DBs
Position
LG10:complement(17750802..17766628)
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGAGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVSLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRMLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEDAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISV
VLNPSNPVNNQVFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQSQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagccgaccatgcagccagacagctgctggactttaac
cagaaactggatatcaacctgctggataatgtggtcaactgcttgtaccatggagcgggg
ccacagcaaagaatggcccaagaggtgctcacacacttgaaggagcacccagacgcgtgg
acacgagttgacaccattctggagttctctcagaatatgaacactaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattctgcccagaaaccaatgtgaa
ggcatcaaaaagtatgttgtggggctcattatcaagacttcatcagatgccgccaatgtt
gagaaagagaaggtgtacattggaaaactcaatatgatattagtacagattttgaagcag
gagtggccgaaacactggcccacatttattagtgacattgttggagcgagccgcaccagt
gaaagcctgtgccagaacaacatgatcattctgaagctcctcagcgaggaggtgtttgac
ttctctagtgggcagatgacacaggtgaaggccaaacacctaaaggacagcatgtgcaac
gagttctctcagatattccagctgtgccagtttgtgatggaaaattcccagaatgcccca
ctggtgcatgctactttagaaacactgctgaggtttctaaactggattccattgggttat
atctttgaaactaaactcatcagtactttggtatacaagttcctaaatgtgccaatgttc
cgcaatgtgacgctgaagtgcttgactgagatcgcaggggtcagcgtgagccagtacgag
gagcagtttgtcagtcttttcactttgaccatgatgcagctcaaacagatgcttcccctg
aacaccaatattcgactggcatactcaaatggtaaagacgatgagcaaaacttcattcag
aacctcagcctgttcctctgcaccttcctcaaagagcacggacagcttatagagaagaga
ctaaacctcagagagactctcatggaggcactgcattacatgttgctggtgtcagaggtg
gaggaaactgagatctttaagatctgtttagagtactggaaccacctggctgctgagctc
tatagagaaagccccttctccacttctgcatctcctctcctctcagggagccaacacttt
gatgtaccgccccgcagacaactgtacctacctgtgctgtccaaggtgcgtatgttgatg
gtgagtcgcatggccaagccagaagaagttctggttgttgagaatgatcagggggaggtg
gttcgggaattcatgaaggatacggactccataaacctttacaagaatatgagagagaca
cttgtctatctgacccatttggactatgccgatacggagcgtatcatgacagagaaactt
cataatcaggtgaacggtactgagtggtcctggaagaacttaaacacgctgtgctgggcc
attggctccatcagtggagccatgcatgaagaagatgagaagaggttccttgtcacagtc
ataaaggacctgctgggtctatgcgagcagaagagaggcaaagacaacaaggctattatc
gcctcaaacatcatgtacatagtgggccagtaccctcgatttctacgcgctcactggaaa
ttcctgaagactgtggtcaacaaattgttcgagttcatgcatgaaacccacgatggagtt
caagacatggcatgtgacacgttcattaagatcgctcagaagtgcagaaggcatttcgtg
caggtgcaggtgggagaggtgatgcccttcattgatgagatccttaacaatatcaacacc
atcatctgtgacctgcagccccagcaggtgcacacgttttatgaagctgtcggctacatg
attggagcgcaaactgaccaggctgtgcaggagcacttgatcgagaaatacatgctgttg
cccaaccaagtgtgggatagcatcattcagcaggccaccaagaatgtggacatcctgaag
gatccagagactgtaaagcagttgggaagcattctgaagaccaatgttagggcatgcaaa
gctgtgggacacccctttgttattcagttaggccgaatctacctggacatgcttaatgta
tacaagtgcctcagtgagaacatctctgctgccatccagaccaatggtgagatggtgacc
aagcagcctttgatcaggagcatgcgaacagtgaagagagagacactgaagctgatctca
ggctgggtcagccgctccaatgatccacagatggtgggggagaattttgtccctccgctg
ttggacgctgtgctcatagattaccagcgcaatgtcccggcagcacgggaaccggaagtt
ctcagtaccatggcaacgatagtaaacaaactgggtggacacattacaggagagatccca
cagatatttgatgctgtgttcgagtgcacattaaacatgatcaacaaagactttgaggaa
tacccagaacaccggacacatttcttctacctgctgcaggcggtgaactctcactgtttc
ccagcattcttggccatcccaccagcccagtttaaacttgtgcttgactctattatatgg
gcttttaaacacaccatgagaaacgtggcagacactggtctgcagattctctacacgctt
ctgcagaatgtggcccaggaagatgcagcggcacagagcttttatcagacttacttctgt
gacatcctgcaacacatcttctccgttgtcacagatacatcacacacagctggtttgacc
atgcacgcatctattcttgcctacatgtttaaccttgttgaggaaggaaaaatcagtgtg
gttttgaatccctcaaatccagtcaacaaccaggtgttcatccaggagtatgtggccaac
ctgctaaaatcagcattcccacatttacaggatgcccaagtaaaagtgtttgtaactggc
ctgttcagtttaaaccaagacatcccagcattcaaggaacacttgagggatttccttgtg
cagatcaaggaatttgcgggtgaggacacctccgatctgttcctggaggaaagggaagcc
tcgctgcgtcagtcccaggaggagaaacacaaactgcagatgtccgtgcctggcattctc
aacccacacgaaatacctgaggagatgtgtgactga
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