Triplophysa rosa: 130560793
Help
Entry
130560793 CDS
T09216
Symbol
nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tros03037
]
130560793 (nphp1)
Cilium and associated proteins [BR:
tros03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
130560793 (nphp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
hSH3
Motif
Other DBs
NCBI-GeneID:
130560793
NCBI-ProteinID:
XP_057200799
LinkDB
All DBs
Position
LG10:complement(18622145..18630701)
Genome browser
AA seq
671 aa
AA seq
DB search
MPPKRRGPLQTVQRETDDMKRKVDALVQQAGKPGTPDRTETFKRCKELQLAVAETMKKLS
KADKPAPVGNYDQCKREEERRLLTLQEHLQSLDFDLQPLDEDAGPSSSQAEQESDEEDSD
DEDGSSEDESSGEEVQDDYVADEDNEDTDVGPSDTGQGSVSYVALSAFTGEEEGDLSVQK
GEVLKILSKNKDGWWLACNSAGQKGVVPKTFLKLESQQESEGENEDEGESEEETETESDS
EPKSSKTSNWDMVRKAITEIDATDVLAAMGAIPSGFRPSTLSRLLEEGTSYRTSHFIQPK
LSQSQLSFKDLHLDPDTGKVHGSPSRVSLTLTLWSCRMIPPPGVGLQVLSRHVRLCAFNG
TQVLSNIHTVRATYNSKSPKSWSFSPRMAGMLPCLLDGDCFLRCDSESPDLGILFELGVT
YIRNSTGERGDLSCGWAFLKLFDESGAPIALRTQELTIHGGTPFERETDLDSTSTKRAAS
TGVLQQMLLSRKQPKLLVKLKSANARRRELLNLLPDTIVGRLSSLQFLAIYRQILADALL
LDRVTMQSADVICNSVLASFPDVLDQPDLMDAFRKSWTESESNLRRSDKRDINVLKQLFV
SVYMSSVYPLLYSAAMPAPCWADEDVESQRARFIYSPSQKLSEGTMLSSQCTHQAFDITQ
VAYDFISSAQH
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaaaaggagaggacctcttcaaactgttcaaagagagacggatgacatgaaa
agaaaggtggatgctttggtgcagcaggctggtaaaccaggtacaccagacaggacagag
acgtttaaaaggtgcaaagagttacagcttgcagtggcagaaacgatgaagaaattatct
aaagcagataagccggctccagtggggaactatgaccagtgtaagagggaagaggagagg
cgtttgttgaccctacaggagcatctacagtctctagattttgacctgcagcctctggat
gaggatgctggacctagttcatctcaggcagaacaggagagtgacgaggaagatagtgat
gacgaagatggcagctcagaggacgaaagtagtggagaagaagttcaggatgattatgtt
gctgatgaagataatgaggatacagatgttggtccatctgacacaggacagggatctgtt
tcctatgttgctctcagtgcatttactggggaggaggagggagacctcagtgttcagaaa
ggggaggttttgaaaattctttcgaagaataaggatggttggtggctggcatgcaattca
gctggacagaagggtgtggtgcccaaaacatttttaaagttggagtctcagcaggaaagt
gagggagagaatgaagatgagggagaaagtgaagaggagactgagactgagtctgactct
gaaccaaagtccagcaaaacatccaattgggacatggtgcggaaggctattactgagata
gatgccactgacgttctggcagcgatgggtgccatcccttcaggcttcagaccctccact
ctctccagacttcttgaagaaggaacttcttacaggacgagtcacttcattcagccgaag
cttagccaatcacagctctcttttaaagatctccatctagacccagacacagggaaggtt
cacggtagtccatctagagtgagtttaaccctgaccctgtggagctgtagaatgatcccg
ccccccggggttgggttacaggtgctcagcaggcatgttcgtctgtgtgcgtttaacgga
acccaggttttgagtaacattcacacagtcagagccacttacaactcaaagagccccaag
tcatggagcttttctccaaggatggctggaatgcttccttgtctactggatggagattgt
tttctgcgttgtgattctgaatctcctgatctcggcattctgtttgaattgggtgtaacc
tacataagaaattccacaggagagagaggagatcttagctgtggttgggccttcttaaaa
ctgtttgatgaaagtggagcccccattgctctacgaacacaagagctcacgattcatggt
ggcacaccatttgagagagaaacagatttggacagcacgtccactaagagagccgcctcc
actggtgtacttcagcagatgctgctgtccaggaaacagcccaaactccttgttaaactc
aagtcagcaaacgcacgtaggagggaacttctgaatcttctgccagacaccatagttgga
cgtttgtcctcactgcaatttctagcaatatacaggcaaatactggctgatgctcttttg
cttgacagagtcacaatgcagagtgcagatgtgatctgcaactcagttttagcttccttc
cctgatgtgctagatcagccggatctgatggatgcatttaggaagtcgtggacagaatca
gagagtaacctaagacgctctgacaagagggacattaatgtgttaaagcagttgtttgtg
agcgtatacatgagcagtgtgtatcccctgttgtattctgcggcgatgcccgctccctgc
tgggctgatgaggacgtggagtctcaacgtgctcgcttcatctacagcccttcccaaaaa
ctctcagaaggaaccatgctgtcatctcaatgtacacatcaagcctttgacatcacacag
gttgcatatgacttcatcagcagcgcccagcactga
DBGET
integrated database retrieval system
