Triplophysa rosa: 130560815
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Entry
130560815 CDS
T09216
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130560815 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130560815 (lrfn5a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
Ig_2
LRR_9
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
C2-set_3
Sp38
LRRCT
Ig_5
Motif
Other DBs
NCBI-GeneID:
130560815
NCBI-ProteinID:
XP_057200832
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Position
LG10:complement(22597024..22637052)
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AA seq
786 aa
AA seq
DB search
MEKLLVCLLVIGMAVKAQICPKRCVCQVLSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSVKRKDLANMTKLVDLTLSRNTISFITPHAFADLENLRALHLDHNRLTRISNDTFS
GMSKLHHLILNNNQLTLIHMGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLHTLSLDH
NMIDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGLLSSSMFALSFGGN
PLHCNCELLWLRRLKREDDLETCATPSHLSGRYFWSIPEEEFLCEPPLITRRSHEMRVLE
GQRVALKCKARGDPEPVIHWISPDGKLISNSSRTLVYNNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELVIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDAKTSLDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNFLVNNLAAG
TQYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLIFIIILMIRYKVCNSGDATKGTSVTEVHSQTNGAQSQGCSVTPSVSKQGALSLEGGE
DYQKSSAQPPDSQTHTSETSILDCSTTTSLVSQSWTTPGSSGSLKPKRKPAPKPVPTAGA
EPKVEALPNAETQNTNRNNSTALQQPLLPAPAPSSRFKDTPILRRARPSASKYMTLPVEG
VRAKRRYSLNENLSKHHCYIGPQKLGDVFCKRSMSMNGMLVQMANSDVDSEKATLSSSEW
ILESTV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctgcttgtctgcctgttggttattggaatggcagtgaaggcccagatctgt
ccgaagcgctgcgtgtgtcaagttctgtcccccaacctcgcaactctctgtgccaaaaaa
ggactgctctttgtcccgcccaacattgacaggcacaccgtggagctccggctagctgat
aactttgtcaccagtgtaaaacgaaaagacttggccaacatgacaaagctggtggatctc
actttgtcaaggaatacgataagcttcatcaccccacatgctttcgcggacctggaaaac
ctacgagccttgcatctcgatcacaatcggttgacccgaatatccaacgacaccttcagt
ggcatgtccaagctacatcacctgattctgaacaacaaccaactgaccctcattcacatg
ggagccttcaatgaccttttagccctggaagaactggacttatcctacaacaacctggaa
tccatcccctgggaggccattcagaggatgaccagcctgcacactctcagcctggaccac
aacatgatcgactacattcccgagggaaccttctccctcttgcagaagctcaatcgcttg
gacgtgacctccaacaagctccagaaactcccaccggaccctcttttccagcgggcgcag
gttcttgccacgtcgggtcttctgagctctagcatgtttgccctgagcttcggaggaaat
cctctacactgcaactgcgagcttctgtggctcaggcgacttaaacgtgaggacgacttg
gagacgtgtgccacgccctcgcacctctccgggcgttacttctggtccatcccggaggag
gagtttctttgcgagccgcccctcatcacccgccgctcccacgagatgagggttctggag
ggccagagagtggcgttgaagtgcaaagccaggggagacccggaacctgtcattcactgg
atatctcctgacgggaagttaatttcgaactcgtcacgtacgttggtttacaacaacggc
acgctggacattctgataagcacggtaaaggatacgggctctttcacttgcatctcctcg
aatcccgccggggaggcccatcagactgtggagctggtcattatcaagcttccacacatt
agcaacagcaccaacaacatccaagagcctgaccccggctcttcagacatctccacttct
acaagggctggagcaaacggcagtaaccacaccggcgatgccaagaccagtctggataag
agggtggttatcgccgaagccacttcatccaccgctctcatcaaatttaacttccagagg
aatatacccggaatacgcatgtttcagattcagtataatggaacttatgatgattctctt
gtttacagaatgattcccccaacgagtaaaaacttcctggtgaataacctggctgcaggg
acgcagtacgacctctgcgtgctggccatctacgacgacggcatcacctcgctgacggcc
acgcgggttgtgggctgtgtgcagttcactacggagtctgaatatttgcgctgccacttc
atgcagtcccagttcctgggcggcacaatgatcattatcatcgggggcataatcgtcgcc
tccgtcctgatttttatcatcatcctcatgatccgctataaggtgtgcaacagcggcgac
gctaccaaggggacctcggtcaccgaggtgcactcgcaaaccaacggggcgcagtcacag
gggtgttcagtcaccccctccgtgtccaaacaaggtgctttgagcttggaaggaggtgaa
gattaccaaaagagttctgcccagcctccagattcccaaacccacacctcggagacctcc
attctggactgctccactaccacttcccttgtaagtcaaagctggacgacacccggctct
tcaggatcactcaagccaaagcgcaaaccggcgccaaagcccgttcccacggctggcgcc
gagcccaaggtggaggcgctacccaacgcggagacgcaaaacaccaaccgcaacaactcc
accgccctgcagcagcctctcctgcccgcccctgcgccctcttctcgcttcaaagacacc
ccgatcttacggagggcacgcccctctgcatccaagtatatgacactgcctgtggaagga
gtgcgagccaaacgcaggtactctttaaacgagaacctgtcaaaacatcactgctatatc
ggtccgcagaagctgggggacgtgttttgcaagcggagtatgtccatgaacggaatgctg
gtacagatggcaaactcggatgtagacagtgagaaagccacattgtccagttcagagtgg
attttagaaagcacggtgtga
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