Triplophysa rosa: 130560995
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Entry
130560995 CDS
T09216
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
tros04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130560995 (cacna1ha)
04020 Calcium signaling pathway
130560995 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130560995 (cacna1ha)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130560995 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
130560995
NCBI-ProteinID:
XP_057201000
LinkDB
All DBs
Position
LG11:16039739..16136501
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AA seq
2324 aa
AA seq
DB search
MTDGEGREHFHYLERDEVRVPISALYRAPGHGEEIGDEEEKSSTWIPVHESSQGQGSGAR
DPTPDLVSDEEEQPPYPALAPVVFFCIKQTTRPRSWCLRMVCNPWFEHVSMLVILLNCVT
LGMFQPCEDLKCQSEWCIILQAFDDCIFAFFAVEMVIKMIALGIFGSKCYLGDTWNRLDF
FIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFMPNDVKDFYNLSLMSSYFMHEDGEDNPFICSANKD
NGMLRCRAVPPLKEGDIECTLKEPPPGHAYFGLDGPSRNTCVNWNHFYNMCQPGKLNPHK
GAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLV
VIATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEEMLRYISHLYRKVKRRAS
RLYLGWQSKRRKKVNPNSGLSGGGGTGGGAGGGANGHSRHRGGGHWIRSVHNLVQKHQRQ
HCHHSNGSPSPLTPTGPGEALEMRCITTGPQLTVSTDPNLSSRTQSVQSIYQGDFHEAPQ
VHSGTVAGAPPLGRINGGMNYPTILPSFICGYKSNNPAGKGRGDSNSSSECDAIDPFEKL
QQLVGEHSHSRVLLQMAGLVPSPLLCELLSCPYCARALETMDLELGDSDCSRSEGDVVYE
FPHGAEFKRGRSSHHNLLEESNQLAQYWENFRDRLIRIVDSKYFNQGIMIAILINTLSMG
IEYHEQPEELTNILEISNIVFTSMFVLEMLFKLLAFGIFGYIKNPYNIFDGIIVVISVWE
IIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSI
LGMHLFGCKFSMKMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTTPWA
ALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANKSDTDEEKRSVNFEEEEKMGELRATE
LKMYSLMMTANGHVDLRGTLPPPIIMRTAATPMPTPKSSLGPESVFGSAESRRGSGVSID
PNAFDQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSGERESLLSEEGR
GSFESEDSEGDKMANTSGGSILPPSSLDIPELPQAPSFSPLGEYHDCNGRTLHLPTDLST
SLGKEDSITEEEDLDDSFCFRLKRTFQAYKPQWCKDHEDWSLYLFSPQNTFRMMCQRLIS
HKMFDHVVLVFIFLNCITIALERPMILQSERVFLTISNYVFTVIFVAEMTVKVVALGFCA
GKHSYLKSTWNVLDGVLVFVSLMDILVSVASTGGNRIFGILRVLRLLRTLRPLRVISRAP
GLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLETKNIHNKSECL
QANYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDKQPERNHNPWMLLY
FISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRLLEKKRRSKEKCGSE
AQQRPYYADYSPARLYIHTLCTNHYLDLFITGIICINVVTMSIEHFQQPPYLDEGLKYCN
YVFTIIFIIEALLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIKMNAALPINPTI
IRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGK
LECNDNNPCEGLSQHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECTPEDKHCLSYLP
LVSPIYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMEMARRLSIA
SEGSSLGPEGRATYVGPWPDSPGEDEAMQRTQENLLSPRKMSVSRMHSLPNDSYMFRPVR
PTSAPYPLEEVEPSQGYLELGSTTSVHSQPCEGYSLLQVPGVPPHSQLYNCLPKIPPPQP
SPTHSIRRTPRRQEAIKNDSIDGQGTDSKDNLDRPGKSKSSFKLPVPRISGPSSSQGSPS
LPPRGRVPSVRTFRQPHRQHNIPSRSPSQASSSRSTSPSGSMFELADPMDDEVCHINSTA
RLWAGVQTEARSHSLSPYTASGTLLPVPVKNCSSAAKLAELSIKDPKKCFRVDTEGFLEK
PYGADDHRRHSIEICPSVDNGVFGQELVEKRHGPMRGQSLHIPRKKKMSPPCISIEPPIE
MGAPASLASMKKLTESSMLLRRRTPSYDLALQQDSLDLPENQLSTQPLIKVERHPSHCAE
YLSLPHPTPMSGLTGILCESTQPPPFDSRFEESTDFGTVNRTAQ
NT seq
6975 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagaacactttcattacttggagagagacgaggtaagagtt
cccatctcagccctgtaccgggcgcctggtcacggtgaagagatcggcgatgaggaggaa
aaaagcagcacatggatccccgtacatgagagctctcagggacaggggtccggggcccgg
gaccccactccggatttggtctctgatgaggaggagcagcctccctatccagcgctcgcg
cccgtggtgttcttctgcatcaaacagaccactcgtccacggagctggtgtctaaggatg
gtttgcaacccatggtttgagcatgtgagcatgctggtcattctgttgaactgtgtgact
ctgggcatgtttcagccatgtgaggacctcaagtgccagtctgagtggtgtatcatcctg
caggcatttgatgactgcatcttcgccttcttcgctgtggagatggtcatcaaaatgata
gccctggggattttcggatcaaagtgttaccttggcgacacgtggaaccgcctggacttc
ttcattgtcatggcagggatgatggagtactcactggacggtcataacgccagcttgtca
gccattcggactgtgcgagtgctcaggcccctgcgagccatcaacagagtgcccagtatg
aggatactggttactctgcttctagatactctgcctatgttaggcaacgtcctcctgctg
tgcttttttgtcttctttatattcgggatcgtcggggtgcagctctgggctggacttctg
aggaatcgctgtttcatgccaaatgacgtgaaagacttctacaatctgtccttgatgagt
tcgtacttcatgcatgaggacggcgaggacaaccccttcatctgttcagccaataaggat
aacggcatgctgcgctgtagagcggtgcctcccctcaaggagggtgatattgagtgcacc
ttaaaagagcctccaccgggacacgcctactttggcctggatggacccagcaggaacacc
tgcgttaactggaaccacttttacaatatgtgtcagcctgggaagctcaaccctcacaaa
ggggcggtgaactttgataatattggatatgcctggattgcgatattccaggttattact
ttggaaggatgggtggacatcatgtattacgttatggatgcccactccttttacaatttt
atatattttatattgcttattatagtgggctccttcttcatgatcaacctgtgcctggtt
gtaatagcaacccagttctctgaaacaaagcagcgtgagaaccagctgatgcaagagcaa
agagcacgctacctctccaacgacagcacgcttgccagctactccgagccgggaagctgc
tacgaggagatgctcaggtacatcagccatctgtaccgcaaggtgaagcgtcgggcgtcc
cgcctctaccttggctggcagagcaagcgcaggaagaaagtgaaccccaacagcgggctg
agtgggggaggcgggactggaggcggggctggaggcggggccaatggccacagcaggcac
aggggcggcggtcactggatccgttctgtccacaaccttgtacagaagcaccaacgtcag
cactgtcatcacagcaatggcagcccgagccctctgacccccacaggccccggcgaggcc
ctggagatgagatgcatcacgacggggccgcagctgaccgtgtccactgacccgaatctt
tcttccaggactcaatcagtgcaaagtatttatcaaggggactttcatgaagccccgcag
gtgcattcaggcaccgtggcgggcgcgccgccgcttgggcgaataaacggggggatgaac
tatccaaccatcttgccctcctttatctgcggctacaaaagcaacaaccctgcaggtaaa
ggcagaggggactcgaactccagctcagaatgtgatgccatagatccctttgagaagctg
cagcagctggtgggagagcacagtcacagccgtgtgctgttacagatggctggtctggta
cctagccctctgctctgtgagctcttaagctgtccgtattgtgcaagggctctggagacc
atggacctggagctcggtgattcagactgctccaggtcagaaggggacgtggtgtacgag
ttcccccatggagcggaattcaaacgcggccgctcatcccatcataatttactggaggag
agcaaccaactggcgcagtattgggaaaacttccgggacagattgatacgcatagtggac
agcaagtactttaatcaaggaattatgattgccatcctcatcaacaccttaagcatgggg
attgaataccatgagcagcctgaagagctgacaaacatcctggagatcagcaatattgtc
ttcacaagcatgtttgtcctcgaaatgctcttcaaactgctggcctttggcatcttcggc
tacatcaagaatccttacaacatctttgatggcattattgtggtcataagtgtgtgggag
atcataggacaagcggatggaggcctctcggttctgaggacgttccgcctcctgcgtgtg
ctcaaactggtgcgcttcctccctgcgctgcgcagacagctggtggtccttatgaagact
atggacaacgtggccacattctgcatgctgctgatgcttttcatcttcacattcagcatt
cttgggatgcatctgtttgggtgcaaattcagcatgaagatggagaatggagacacgatt
ccagacaggaaaaactttgattctctgctgtgggcgattgtcactgtgtttcagattctc
acccaggaagactggaatgtggtcttgtataatggaatggcttccaccactccatgggca
gctctttactttgtggcactgatgacttttgggaattacgtgctttttaacctgctggtg
gccatattagtggagggctttcaggcagagggggatgctaacaagtcggacacagatgag
gaaaagaggtcggtgaactttgaagaggaggagaagatgggggaattacgagccacagaa
ctaaagatgtactctctgatgatgacagcgaatgggcatgtggatcttcggggcactttg
cctccaccaatcatcatgcgcactgctgccacacccatgcccactcccaagagctctctt
ggcccagagtcggtgtttggctcggccgagtcgaggcggggcagtggggtctccatagat
ccaaatgccttcgatcagaaatccctgactagtccaagaagatctccatgtcacccccgt
ggctcaggcagtaactggggcagtcgcaggtccagctggaacagcttaggacgggcgccg
agcttgaaaagaaaagacacgtctggggaaagggagtctctgttgtctgaggaaggcagg
ggcagctttgagagtgaggattcggagggagacaagatggccaataccagtgggggctca
attctgcctcccagctctctggatatccctgagctgccgcaggcccccagcttcagccca
ttgggagagtatcatgactgcaatggaagaaccctacacctgcccactgacctgtccacc
agcctgggcaaagaagattccatcacggaggaggaggatttggatgatagcttctgtttc
cgtctgaagaggacgtttcaagcatataaacctcagtggtgtaaagatcatgaggactgg
tcactttatctgttctctcctcagaacacgtttcgaatgatgtgtcaaaggttaatttct
cacaagatgtttgatcatgtggtcctggtattcatcttcttaaattgtatcacgattgct
ctggaaagacccatgatcctgcaatctgagagggtgtttctcactatttccaattatgtt
ttcactgtgatctttgttgctgaaatgactgtgaaggtggtggcccttggcttctgtgcc
gggaagcacagctatcttaagagcacctggaacgttctggatggagtgctggtgtttgtc
tcgctcatggacattctggtttcagtggcttccaccggtggaaacaggattttcgggatc
ctgagggttcttcgcctgctgagaaccctgcggcctctgagggtgattagccgagctcca
ggactaaagcttgtagtggaaacactcataacgtccctgaggcccatcgggaacattgtg
ctgatctgctgtgccttctttattgtctttggcattctgggtgtccagctcttcaaagga
aagttttatcattgtgaaggtctcgaaactaaaaacatccacaataagtctgagtgtctt
caagcaaactacaagtggattcggagaaagtacaactttgacaatttgggacaggccctc
atgtcgctgtttgtgctgtcctgtaaggacgggtgggtgaatataatgtacgacggactg
gatgctgtgggcgtggacaagcagcccgagcgcaatcataatccttggatgctcctctac
ttcatctccttcctgctgatcgtcagcttctttgtgctgaacatgtttgttggggtggtg
gtggagaacttccacaagtgcagacaggaccaggaggaagaggaggcacgtctgcgcgag
gagaagaggcagaggctgctggagaaaaagcgcaggagtaaggagaaatgcgggtctgag
gcccagcagaggccctattatgcagactactctccggcccggctttacatccacacactg
tgtaccaaccactatctggacctcttcatcacaggcatcatctgtatcaatgtggtcacc
atgtctatcgagcatttccaacagcctccgtacctggacgagggcttgaaatactgtaac
tatgtctttaccatcatcttcattattgaggctttactcaaactggtggcctttggcttt
cggagattcttcaaagacagatggaaccagctggatctagcaatagtcctgctctctgtc
atgggcatcacgctggaggagatcaagatgaatgcagcactgcccatcaaccctacaatc
atccgcattatgagagtgctgaggatagccagagtactgaagcttctaaagatggctact
ggcatgagagctctgttggatacagtgatgcaggctttaccacaggtgggaaatctgggc
ttgctgtttatgctgctcttcttcatttatgcagcacttggcgtggagctttttgggaaa
ctagaatgcaatgacaacaacccatgtgaaggactaagtcaacatgcgacctttgagaac
tttggaatggcctttttaactttattcagagtgtcaacgggggacaactggaatggaata
atgaaggacactctgcgggagtgcactccagaagataagcactgcctcagctacttgccc
ctggtgtcccccatctactttgtcacttttgtgctaattgctcagtttgtgctggttaat
gttgtggtggctgttctgatgaaacatctggaggagagcaacaaagaagctaaagaagat
gcagaaatggatgccgagatcgagatggagatggaaatggctcggcgtctcagtatcgcc
tcagaagggagttctttagggcctgagggaagagcaacttatgtaggaccatggccagat
tcacctggagaggatgaggcgatgcagaggactcaggagaatttgctatctccacggaaa
atgtcggtgtcaaggatgcattctctgcccaatgatagctatatgtttcgcccggtgaga
ccaaccagcgcaccgtatccactggaggaggtggaacccagtcaggggtacctagaatta
ggctccaccacgtcggttcactcccagccatgtgaaggttattccctgctccaggtccct
ggtgttccaccccattcccagttgtacaactgccttcctaaaattcctcctccccagccc
tctccaacccatagcatacgcaggactccacgaagacaggaggcaataaaaaatgactcc
atagatgggcaaggtactgactccaaagacaatctcgacagaccagggaaaagcaaaagc
agcttcaagctgcccgttccccggatctctgggcccagcagctcccaaggatcaccctcg
ctacccccacgtggacgcgtacccagtgtccgcaccttccggcagccccacaggcagcac
aatatcccttcgcgatctccaagccaggccagcagcagcagaagcaccagccctagcggc
tccatgtttgaattagctgatccgatggatgatgaggtctgccacatcaacagtacagca
aggctgtgggcaggggtccagacagaagcacgcagtcactctctgtctccctacaccgcc
tcagggacactgcttccagtcccggtgaagaactgcagcagtgctgccaaattagccgag
ttaagcatcaaagatcccaagaagtgcttcagagtggacaccgagggttttctggaaaag
ccttacggtgccgatgatcatcgccggcattccattgagatttgtccttcagtagacaat
ggggtgttcggtcaagaactggtcgaaaagaggcacggtccaatgcgcggacagtctctg
cacattcccaggaagaaaaagatgagccctccttgtatctccatagagcccccaattgaa
atgggggcccctgcctctctcgcatccatgaaaaagctgacggagagcagcatgttactg
cggcggaggacgccgtcgtacgacctggccctgcagcaggactctctggatttgccagag
aaccagctgtccacccagccgctcatcaaagtagagcggcacccctctcactgtgcagag
tatctgtcactaccgcaccccacccccatgagcggtctgacgggcattctgtgtgaaagc
acacagccacctccctttgacagcagatttgaagaatccacagacttcggcactgtaaac
agaacagcccaataa
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integrated database retrieval system
