Triplophysa rosa: 130561062
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Entry
130561062 CDS
T09216
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130561062
03036 Chromosome and associated proteins [BR:
tros03036
]
130561062
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130561062
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130561062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130561062
NCBI-ProteinID:
XP_057201153
LinkDB
All DBs
Position
LG11:14206654..14234427
Genome browser
AA seq
1843 aa
AA seq
DB search
MAPIRDSVSHSPNQTGLEHTGLESQYENSPWSSSSPCSDSNSNWGKVIVDKGPWPSITGS
DPELASECMDADSASSSGSEKNLSMMASGNTGGDNNGNRQGSSQGSHFMVANCSNNVGNG
SVKGPWGVSNGSMLSTCQGSVEGPSSKLVESSHGKINAWGTQGSSTNVDLNPSTLNPNAN
HGAWPVLQNTGPNPHGPVGNGNGGTNTQQSTIGQTPSMQSINSKMSRGCLQENMSEAEVN
GTSKVTSGQPQNLNTEFNGPNNTTNTMTSSLPNSTGSIQLNEQPPGHRAWPVNTGSSPQL
PISSVSNGTSISQHGNSEGINSGSYGTGWGIPPGTNYSGDKCPIPKGQAVVDTVNATLMQ
SGANGSSVSAAALKHNNNTGMGSRGGGWDSASTTSQNMSWGAGNGVGPAGIPRPWGNASS
SSSSSSSSSSNTGTKVSNGEWNTLPSNSQHSNEGTNGGRKGTNGWKSLEDDALGIRSSGQ
PSQGSTWNKSTGSEGSGESSGDCSDKDGQCSSNRRRNNQPGTIHADLTKIDMDPRVLSNT
GWGQTPVRQNTAWDVTTSDKKQGNGQMGWGGAPPQKSNSGGWGDGPSTNSRESSVSGWTE
PSKPSTGWGETKGPVGQSGWEDASVTMNKNSSSWNSGKDEKSSWNNTQKAKQGWGGPSAG
EGWGGEGPKGSHWEEPQKSGSGGWDSDSDRSGSGWSEPGRCRTSNTWGGGSGGTNTPDQS
GPTTGWGEPTKTIHQNQTWCEPMKATHSNSTWGDTAKPNNSSEWGKSQDSSMAKFRSGNV
SQTGAPGQNKPTGWLGGPMPAASKEEESTGWEDPSPESIRRRMEIDDGTSAWGDPKKTNY
SNVNMWNKNTAGEQDGVAVSQPPQAQSSMAPKEKNCSSGWGETYGVPQKMESSTWGEPAG
PPVTVDNGTSAWGKSVDKSSSWEEPGRENSGGSGWGNAAVGQQSQHKSGSKPMQDNWCGD
EMSMTGHSNWEEEEEVKIGVWNNNPSQEINQTGNWSYKKMPPKMNKGPNKQDDSPWMNQF
VKQFNNMYPRDSSEDSLKGNKMDMPGGMTDKRMDVDSHVLNMGEYGKNPALRHQIHKDSP
MDRNPYMDKLSLPLYDNTVAEEPQNSQITSMQNMSYSPTNSAQPNQCSLPGPHHPNSASV
RQNVNMYGVGNAAAQGRNAQQPPAQPLNSAQPNLRNQVPPPLHPSQVPPPLLKYSPNNGG
LNPLFGPQQVAMLNQLSQLNQLSQLSQINQLQRLLLQQKVQSQRAMPVNSRQQQEQQGRG
LGPSQQMIQPPRHLDPSLMKQQNSPQPPSMHQPGLKYMENFMSPNASDLQKEQSSLSSFS
NFPLGGCPPHLHVGQNDSMLHQAAKPNTMFASDMSGCQPAGISQSHSLLSNGHMVPGSSV
NPRVGKNFCPDSSSLPARGLNSNLNVSNLDISSVGFKEPQSRLKKWTAMDISVNSPLDQN
PSKTGAITSGLRLEDSHLSPYDFMNASNAPISPPGSVGDGWPIRAKSPHGSTHVNWPPEF
RPGEPWKGYPNIDPETDPFVTPGSVINNLSINTVRDVDHLRDRNNGPSSSLNTTLPSNSA
WTSIRASNHNSSLSSTAQSTSARNSDSKWSPVTNTSLAHELWKVPLPSKGISAPSRPPPG
LTGQKQPSSWDNSSLRLAGWGSSESRFTSGSSWGDSSSGRTNWLVLKNLTPQIDGSTLRT
LCMQHGPLITFHLNLPHGNAVVCYSSKEEAAKAQKSLHMCVLGNTTILAEFASEEEINRF
FAQGQSMTASPSWQTLGSSQNRMGSIEGSHPFPNRSDLNQWNGSGLSGAGSGDLHASSLW
GVPNYSKSLWGSPSGGEGGRINSPSPIGSFLSVDHLTGGGESM
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggattctgtcagccactcccctaaccaaacaggtttagaacatact
ggactggaatctcagtatgaaaattcgccatggagctctagttcaccttgcagtgactcg
aacagcaactggggaaaggtcattgtagataagggaccctggccctccatcactggtagt
gacccagagttagcctcagaatgtatggatgctgactcggcctccagctctgggtctgag
aaaaatcttagtatgatggcatctggaaacactggcggtgacaacaatggcaatagacaa
ggaagcagtcaaggttctcatttcatggttgcaaattgcagcaataatgtgggtaatggg
agtgttaaggggccttggggtgtatccaatggctcgatgctaagcacatgtcaaggctct
gtggaaggccccagcagcaagctggtagaaagcagccatggcaaaattaacgcgtggggt
acccaaggttcctcaaccaatgtagatttaaatccaagcactttgaacccaaatgccaac
catggtgcctggcccgttcttcagaacactgggcccaacccccatgggcctgttgggaat
gggaatggtggcaccaacactcaacaaagcaccataggtcaaacacccagcatgcagagt
atcaactctaagatgtcccgaggatgcctgcaagaaaatatgtctgaagctgaagtcaat
ggtacaagcaaggttacaagtggacagcctcaaaaccttaacactgaatttaacggacca
aataacactactaacacgatgacctctagtttaccaaactctacaggttcaatacagttg
aatgaacagcccccagggcaccgagcctggcctgtgaacacagggagctctcctcagctc
cctatttcttcagtctctaatggcacttccatttctcaacatggcaacagtgagggaatt
aatagcgggtcttatggtacaggatggggaattccacccggcactaattactctggagac
aaatgtcccattcctaaaggccaagctgtggttgacactgtgaatgcaactctaatgcag
tctggagctaatggttcctctgtgagtgctgctgctttaaagcataataataatactggg
atgggcagtcgcggaggaggttgggactcagcgtccactacctcacaaaatatgtcttgg
ggagctggcaacggtgtgggcccagctgggatccctcgcccttgggggaatgcctcctcc
tcctcttcttcctcttcctcatcctcttcaaacactggcactaaggtctcaaatggggag
tggaacactttgcccagcaacagtcagcattccaatgagggcacgaatgggggcaggaag
ggaacaaatggatggaagtccttggaagatgatgctctcggtattaggagctccggtcag
ccatcacaaggcagcacatggaacaaatcaacaggcagtgaaggaagtggagagagctca
ggagattgtagtgataaggatggacagtgcagcagcaaccgcagaaggaataaccaacca
gggacgatacatgcagatctcactaaaatcgacatggaccccagggtcctgtccaacacg
ggatggggacaaaccccagtccgccagaacactgcctgggacgtaaccacctctgataaa
aagcaaggaaatgggcagatgggctggggcggcgctccacctcagaagtctaactcaggg
ggttggggagatggacccagcaccaacagtagagagtcttctgtgtccgggtggaccgaa
ccttcaaaaccttcaacaggctggggagaaaccaaaggccctgttgggcaaagtggttgg
gaggacgcttctgttacaatgaacaagaacagttcctcatggaacagcggcaaggatgaa
aagtcctcctggaataacacacagaaagcgaagcaaggatggggtggtccctcagctgga
gagggatggggtggagaaggcccaaaaggaagccattgggaagagccccagaaatctggt
tccggtggctgggacagtgacagcgatcgctctggatcgggctggagcgagcctgggcgc
tgcagaacgagcaacacctggggaggtggcagcggaggcacgaacactcctgaccagagt
ggtccaaccacaggatggggtgaaccaaccaagaccatccatcaaaaccaaacctggtgc
gagccaatgaaagcaacccactccaactctacttggggtgacactgcaaaaccgaacaac
tcttcagagtggggcaaatcccaagattccagcatggcaaaattcaggagtgggaacgtc
tctcagaccggagcccctggtcaaaacaagcctacaggatggctgggaggaccaatgcct
gctgcctctaaagaagaagaatccactggatgggaagacccatctcctgaatccattagg
cgtagaatggagattgatgatggtacttcagcatggggagatcccaaaaaaaccaattac
agcaatgtaaacatgtggaacaagaacactgccggagagcaggatggtgtggcagtttca
cagcccccacaagcccaaagctccatggcgccaaaagaaaagaactgcagctcagggtgg
ggagagacatatggtgtgccacaaaaaatggagtcctctacctggggtgagcctgctggt
ccacctgtcactgtggacaatggcacttcagcctggggaaagtctgttgataaaagctcc
agctgggaagagccaggacgggaaaactcaggaggcagtggctggggcaatgctgctgta
ggacaacagtcacagcacaagtctggatccaaacctatgcaagacaactggtgtggagat
gagatgtccatgacagggcactccaactgggaggaggaagaggaagtaaagataggcgtg
tggaacaacaatccatcacaggaaattaaccaaactggaaactggtcctacaagaagatg
cctccaaagatgaataaaggacccaacaagcaggatgattctccatggatgaatcagttt
gtgaaacagttcaacaacatgtatcctagagattcctctgaagattccctgaagggcaat
aagatggatatgcctggaggaatgacagacaagcgcatggatgttgacagtcatgttctt
aacatgggagagtatggaaaaaatcctgccttacgccaccagatccacaaagactcaccc
atggaccgcaatccctatatggataagctttcactgcccttatatgataacactgtagca
gaggagccccaaaactcacagatcacttccatgcagaatatgagctattcccctacaaat
agtgcgcaaccaaaccagtgcagcttgccagggcctcaccatccaaactctgcctctgtt
aggcagaatgtaaacatgtacggtgtcggtaatgcagcagcacaaggccggaatgcccag
cagcctccagcacaacctctgaactctgctcagcccaatctccgtaaccaagtgcctcct
ccactacatccctctcaggtcccgccacccctgttgaagtactctcccaataatggaggt
ctgaaccctctgttcggcccacagcaggtggcaatgctaaaccagttgtcccagcttaac
cagctctctcagctctctcagattaatcagttacagcgtcttctcctgcagcaaaaagtg
caaagccagagggccatgcctgttaacagccgacagcaacaggaacagcagggtcgtggt
ctgggcccatcccaacagatgatccagcctccccgtcatctcgatccatccctgatgaag
cagcagaactctccccagcctccctcaatgcaccagcctggcctcaagtacatggagaac
ttcatgtcccccaatgcctctgacctgcagaaagaacaaagttccctgagctctttcagt
aatttccctttaggtgggtgtcctccccatcttcacgtagggcagaatgactcaatgttg
caccaagctgccaagcccaacacgatgtttgcctctgacatgtcaggctgtcagccagct
ggcattagtcaaagtcatagcctcctgagcaatggccacatggtgccaggctcttccgtg
aaccctcgggtaggaaagaacttctgtcctgacagcagctccctgccagcaagaggcttg
aactcaaacttgaatgtaagcaaccttgacattagtagtgttggttttaaagagccacag
tcccgtctgaagaagtggactgccatggacatttccgttaactcgccacttgatcaaaac
cccagcaaaactggtgctataacatctggcctgaggcttgaagactcgcacttaagtcca
tatgacttcatgaatgccagtaatgctcccatcagtcctcctggctctgtgggagatggc
tggcccatccgtgccaaatcacctcatggttccacccatgtcaactggccaccagagttt
cgtcctggtgagccctggaaaggatatccaaacatcgatcctgaaactgacccatttgtc
actcctggcagtgtgattaataatctctccattaatacagtccgggatgttgatcacctc
agggacaggaacaatgggccatcctcatcacttaacaccacgctgccttcaaatagtgcc
tggacatccattcgtgcctccaaccacaatagttccctcagcagtacagcacaaagcact
tcagccagaaacagtgactccaaatggtctccagtcaccaacacctctttggctcatgag
ctgtggaaggttcctctcccctcgaaaggtatctctgctccgtcccggcccccacctggc
ctcactggccagaagcagccctcgtcttgggacaacagctctctgagactggcaggctgg
ggcagctctgaatccagattcacctctggttccagctggggtgacagcagctcagggaga
actaattggcttgtactcaaaaaccttacacctcagattgatggctccaccttgcgaact
ctgtgcatgcagcacggtccactgatcacattccatctgaaccttccccatggcaatgct
gtcgtctgttacagctctaaggaggaggcggccaaagcccaaaagtcactgcacatgtgt
gttttagggaacactactattcttgcagaatttgctagtgaagaggaaattaatcgtttc
tttgcacaaggtcagtcaatgaccgcttctcccagctggcagacgctgggctcttctcag
aaccggatgggatccattgagggttcacaccccttcccgaaccgctccgacctgaatcag
tggaacggcagcgggctgtcgggagccggcagtggagacctgcatgcttcgtctctctgg
ggtgttcccaattactccaagagcctgtggggcagccccagtggcggtgagggcgggaga
atcaacagtccctcccccatcggctcctttctttctgttgaccacctgacaggaggtggg
gagtccatgtag
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