Triplophysa rosa: 130561079
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Entry
130561079 CDS
T09216
Symbol
rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130561079 (rbbp6)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130561079 (rbbp6)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
U-box type E3
130561079 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
SR-25
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
130561079
NCBI-ProteinID:
XP_057201179
LinkDB
All DBs
Position
LG11:14164505..14181037
Genome browser
AA seq
1766 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
GALIPKNSSVIIRRIPIGGVKSTSKTYVIDRSEQSSGSSKAIDDSSSISLALLSKTANLA
ETNASEEDKIKAMMSQSNHDYDPINYAKKLVGPPPPNYTCFRCGKTGHYIRNCPTNGQDR
SFEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGIYAIPTIDAEAYAIGKKEKPPFLP
QNQSSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTCLLESDEHVCPTCK
QSDVSPDALIANKFLRQAVNNFRNETGYTKRIRKAAAAAQSTTSGSQTQAPVQRPPMRRQ
QDPLMANVPSSTAASTPPQSMPAAALSPVATPQPSSTPPPASSSSIQSSNAPAGPDNSPT
VNSPQHSTKQDDPPLSKESEVPASAPVPSSEASAPTNTASKGFHVPVIGQPNMPQHVMHR
TGQPRASGPRPTTSRPNWDQSTSRGRAPIDRPPRTQHPPVQNLPPVPCPGAPMFMPPALF
PPPPHPMPQPPGVIPPQYPMPFPPGQQPPPPFNLPPPVYPPVPPNVQVPWVPPGTQPPIA
NPISSMPVEPFLSKEEFYRQQRRLKEDSQCRFVAREKSKLEEFTNDFAKELLEYRKIQKD
RRRSYSRSKSPYRDSSYSGSSYSYSKSRSRSRTPRSYSRSLSRSRSRSRSRSFSRSPYSR
RGRGRSRSYRSRSRSPAYHRSRSRSPSYRGRDLSGMGGAMYRSRSRTPPFRNYSPSKKLP
PPSQMEGERKYNSRYREIPPYEPKAYYGRSVDQSDPYERERYREWEREYRDWYDKYLKSY
NSPPGSQLRGRGAGSRDPHTPERYPPPRPRENSPYSRGRREDYPPPPQSHSGPPRGRGPM
TYQEKCAEKFGHLHANTSGPSRGPKESLKPLKDREASGSTATDSKSLKHKKHRKKKRDDG
DPFSHSDSMDESRKDDRKGDSMLMNSNRDDATPVRDEPMDNAAVPYKSTPEKEKKEKSKS
KTDKVKRKTESSGGKKEIPGKVTKPVKEKEAADALREKAAPTEPAIKRVKDEPSSHKSEA
SKPQTVESKLMLPRKLMQSRPIKHHQELKPIKDDLKNKKELVKEPSKQDKVPIKDVKVKK
EPEKPVRTDEKMHTKAVDAKQDKKMTKRKDEKSSMKDLDAPPTKVAKMEVDVAKGSPKPK
PRPESERPAEEKKPAIPSLLDIKPEPVRKIKINREIGKRISSTDRAFSSEDIAHTTAKGR
LEKSRGKLRRKVHASDGSGSVLVDYTSTSSTGGSPIRKHEDKLDLKKTVVKTLEEYTNDS
STPAEDEIVMIQVPRSKWEKEDYESEDDESKGTTRTRRVNLPSSAPVEEATAAKSTDKES
PNADKTPSASKDAQMSDVKPAKDSTTSDKEKDTDKEKDRERDRGKEKDHSAAEREATDKR
KPNQERERPQERSSEHGSERSSSQSSRDRQADRPESTSRKPAGRETTTGPGNRKPDHRED
ARDHLATRSKDEREPIRRRLSPSPPSRVKDVHADSGRKANEVSQESQSPTKDKRMSSQNA
PESKRTGAEDHKADWSLSKESSRHSDMRPAKDREHRTHRTLTPEPRTEAEKGASHGDHKV
PSTRTMRLSSDLARETDEAAFVPDYSESDSETSDLENKAEQRGRERDSSGSHSPSPSGSH
GHSSSPSSPGSQDSKKKKKEKKEKKEKKKHKKHKKHKKHKKHTSNESESELKGQKHKHKK
KKSKKSKDKDKDEKEESEEQRVKVSV
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattacaagttttcttctaaacttaactacgacacggtcacctttgat
ggcctccacatcacgctcagtgatttgaaacgccagatcatgggccgagaaaaactgaag
gccgcggactgcgacctgcaaatcaccaacgcgcaaactaaagaagaatacactgatgat
ggggcccttatacccaaaaactcatctgtcatcatcagacgaatacctattggaggggtt
aagtcgacaagcaaaacatatgtcatcgatcgatctgaacaatcaagtggatcttcaaaa
gcaattgatgattcttcatccatttcactggctctgctttcaaagacagccaatcttgct
gaaacaaatgcgtcagaggaagacaaaattaaagcaatgatgtctcagtccaaccatgac
tatgaccccatcaattatgcaaagaagcttgttggtccacccccaccgaactacacatgc
tttcgttgtggaaaaactggacattatatcaggaactgcccaacaaatgggcaggaccga
agtttcgaagctcctcaacggataaagaaaagcacaggaattcctcgcagttttatggtg
gaggtagatgatccaaaccggaagggtgtaatgctgaccaacagtggaatatatgccatt
cccactattgatgctgaggcctatgctattggaaagaaagagaaaccacccttcttgccc
cagaatcagtcttcatcttcagaggaagaggatccagtgcctgatgagctactttgtctg
atctgcaaggatcttatgactgatgctgttgttattccctgttgtggaaatagctactgt
gatgagtgtatccggacgtgtttgctggagtcagacgaacatgtttgccccacctgcaaa
cagtcggatgtgtctcctgatgctttgattgcaaacaagtttttgcgccaagcagtgaat
aattttaggaacgaaactggatacaccaaaagaattcgcaaggctgctgccgctgctcaa
tcaaccacatcaggatcccagactcaggctcctgtgcagcggccacctatgagacgccaa
caggaccctctgatggccaatgttcccagttcgacagctgccagcacccctcctcaaagc
atgccggctgctgccttgtctcctgttgccactccccagccctccagcacgccaccacct
gccagcagctctagcatacagagcagcaatgcacctgcagggccagacaacagccccaca
gtgaactcacctcagcactctaccaagcaggatgacccacctttgtccaaggaatctgaa
gttccagcatctgctcctgtgccttcatcagaggcctctgctccaacaaatactgcttcg
aagggattccatgtcccagtaattgggcagcctaatatgccacagcacgtcatgcacaga
acaggacagcccagggctagtggaccaaggccaaccacgagtcgtcctaactgggaccaa
tccacaagtagagggagagcacctattgatcgaccacccagaacacaacatccgccagtg
caaaaccttcctcccgtgccgtgtccaggggctcctatgttcatgcctcctgcgctcttt
ccacctccaccacaccccatgcctcagccacctggtgttattcctccgcagtatccaatg
ccttttcctccaggacagcagcctccccctccattcaacttaccaccaccagtctatcct
ccagtcccacccaatgttcaagttccctgggtgcctcctggcactcagccacccatagcc
aaccctatctccagtatgccagtagaacctttcctttccaaggaggaattctacagacag
cagcgcagactgaaggaagattcccaatgtcgattcgttgccagggagaagtcaaaactt
gaggaatttaccaacgattttgccaaagaactgttagagtacagaaaaattcagaaggat
agaaggcgatcctactcaagatcaaaatctccatacagggactcctcgtacagtggctca
tcatattcctattcaaaatctcgctcacggtcccgaacaccacgctcatactctcgctca
ttatcccgctctagatcacgctcccgatcacgctctttttctcgttcgccatactcccgc
agaggccgaggtcggagtcgtagttatcgatccaggtcacgcagtccagcgtatcatcgc
tcccgcagcagatcgccatcgtatcgaggtcgggatttgagtgggatgggtggtgcaatg
tatcgttctcgttcccggaccccaccgtttaggaactacagtcctagcaagaaactccca
cctccttctcagatggagggtgagcgcaaatacaacagcaggtacagggagattccacca
tatgaacctaaagcttattatggacgaagtgttgatcaaagtgatccctacgagagagag
cgctaccgagagtgggaaagagagtatagggattggtacgacaaatacctcaagagctac
aacagcccaccaggcagtcagcttcgaggccgtggtgcaggcagtagagatccccatacg
cctgagcgttatccccctccccgtccgagagaaaactccccctacagcaggggacgacgg
gaggattatccgccaccacctcaaagccacagtggccctccgagaggccgaggtccaatg
acgtaccaggaaaagtgcgcagagaagtttggccacctccatgccaacacttctggacct
agtagagggcctaaagaatctctgaagcctcttaaagacagagaggcaagtggcagcact
gccacagactccaagtctttgaaacataagaaacatcgcaagaaaaagagagatgacggt
gaccccttcagccactcagactctatggatgaatccagaaaagatgatcgtaaaggagac
tcgatgctaatgaattcaaaccgtgatgatgccacgcccgtcagggatgagcccatggac
aacgctgcagtgccttacaagagcacccctgaaaaagagaagaaagaaaagtccaaaagc
aagactgacaaagttaaacgaaagactgaaagcagtggagggaaaaaagaaatacctgga
aaggtgaccaagcctgtgaaagagaaagaggcggcggatgcactgcgagaaaaggcagct
cccactgaacccgccattaagagagtaaaagatgaaccatcatcacacaaatcagaagca
agtaaacctcagacagtagagtcaaaactcatgctccctcgtaagctcatgcagtccagg
cccatcaaacaccatcaagagctgaagcccatcaaagatgatcttaaaaacaaaaaagaa
ctagtaaaagagccttcaaagcaagacaaagttcccatcaaagatgtaaaagtcaagaaa
gagccagagaagcctgtgagaactgatgagaaaatgcacaccaaggcagttgatgctaag
caagataaaaagatgacgaagcgaaaagatgaaaaatcatctatgaaagacctagacgcc
cctccaacaaaagtagcaaaaatggaagttgatgtggctaaaggctcaccaaaacctaaa
cccaggcctgagagcgaaagaccagctgaggagaagaaacctgccattccgtcccttttg
gatattaaaccagagcctgtgagaaagattaaaataaaccgagaaattggcaaaagaata
tctagcaccgatcgtgctttttcatcagaggacatcgctcataccacagcaaagggcagg
ctagagaagtcaaggggaaaattgaggaggaaggtacatgcatccgatggatcggggtct
gtacttgtcgattacaccagcaccagctccacaggcggaagccccatcaggaagcacgag
gacaagcttgacctgaagaaaactgtggtgaagaccctggaggaatacactaatgacagt
tctacccctgctgaggatgaaatcgtcatgatccaggtgccccgctccaaatgggagaaa
gaagactatgaatctgaagatgatgaatctaagggcaccaccagaactcgacgtgtcaac
ctacccagctctgctcctgtggaagaagcaactgcagcaaaatcaacagacaaagagtct
cccaatgctgacaaaactccgtctgcctccaaagacgctcagatgtcagatgtcaaacct
gctaaggactccacgacaagcgataaggagaaagatactgacaaagagaaggacagagaa
cgagaccgagggaaagaaaaggatcacagcgctgccgaacgtgaagcaactgataaaagg
aaaccaaatcaggagagagagcggccacaagagaggagcagcgagcacggcagcgagcgg
agctcttctcagtcctccagggacagacaagctgacaggcctgaatcaacctctagaaag
ccagcaggtagggagacaactacaggccctggcaacagaaaaccagaccacagggaagat
gcaagagaccacttagcaaccagatcgaaagatgagagagaacctatcagaagaagattg
tcgccctccccgccctcaagggtaaaagacgtgcatgcggattctggaagaaaggctaat
gaagtttctcaggagtctcaaagtccaactaaggataagagaatgtcatcccagaatgcc
ccagagagcaaaagaacaggggcagaggaccacaaagcggactggtcgcttagtaaggag
agctctaggcattctgatatgcgtcccgcaaaggacagggagcacaggactcatagaact
ttgactccagagcctaggactgaggcagagaaaggtgcttcacatggggaccacaaagtc
ccatccacgcgcaccatgcgactgtcttcggatttagcacgggaaaccgacgaggctgcg
tttgtaccagactacagcgaaagtgacagcgaaacctcagacttggagaacaaagctgag
caaagggggcgagagagagacagtagtggcagccacagcccaagcccttctggcagccac
ggacacagcagcagccccagctctccaggcagtcaggatagcaaaaagaagaaaaaggag
aaaaaagagaaaaaagagaagaaaaaacacaagaagcacaagaaacacaaaaagcataag
aagcatacaagtaatgaatctgaatctgagctcaagggacagaaacacaaacataagaaa
aagaagtctaaaaagagtaaagacaaagataaagatgagaaggaggagagtgaggaacag
agggtgaaagtatcagtttaa
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integrated database retrieval system
