Triplophysa rosa: 130561106
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Entry
130561106 CDS
T09216
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130561106 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130561106 (rangap1a)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130561106 (rangap1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Nop14
CDC45
SDA1_dom
CPSF100_C
BUD22
Motif
Other DBs
NCBI-GeneID:
130561106
NCBI-ProteinID:
XP_057201224
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Position
LG11:complement(927805..935856)
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AA seq
591 aa
AA seq
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MLSSSVCVYMSSVDVRMASDDVTQLADSLAKTQVNEGELSYKGRGLKLDNAQSVNEMVKD
IEEFDGLRALRLEGNTVGVEAAQTIAKALETKSDLQCCYWSDMFTGRLRAEIPPALVSLG
DAIVMAGARLKVLDLSDNAFGPDGVKGIELLLKSSACHSLQELRLNNCGMGIGGGKILAA
ALTVCYKESSALGSPLKLKVFIAGRNRLENDGATALAQAFQVIGSLEEVHMPQNGINYPG
VTALATAMQHNPQLRVLNLNDNTFTKKGAIAMAKALQHLRNVQVINFGDCLVRSEGAIAI
AETLRNGLPLLKKLNLSFGEVTEEAALTVATSVQHKDQLEKLDLNGNCLGDEGCENLREL
MEGINMSHVLGSLSDDEGEPEDDEDDDDDEDHDDGEEEDDEDVEEEEEEEEEEQHNDSNQ
FSTPPSAPRPPDVSSFLSFPSPDKLLRLGEKRSSLIQQQVDVMDVHRTAEVFLQISSVYK
EDNTEVKSAVLESIDAVMSKVFSTPSFQWLSFVSSLLVMLGLLKSEDKLKPVKVVPGHLQ
CLEHAVKQSYFPKEHIAVLNAFMARQNKSLESCNGARDRLKSTLQKLTTES
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctcgtctgtgtgtgtttacatgtcttcagttgatgtcaggatggcgtcagat
gatgtcacgcagctcgcagactcactggcaaaaactcaagtgaatgaaggagagctgagc
tataaaggacgaggactcaaactggacaatgcgcagtctgtgaatgagatggtgaaggac
atcgaggagtttgatggtctgcgtgcgctgagactggagggaaacactgttggtgtggag
gcagcgcagaccatcgctaaagccctggagacgaagagcgacctgcagtgctgttattgg
agcgacatgttcaccgggcgtctgcgagctgagattccacctgcgctggtgtctctgggt
gacgccatcgtcatggccggcgcgcggctgaaggttctggatctgagcgataacgctttc
ggaccagatggagtgaaaggtatcgagctgctgctgaagagctccgcctgccactcgctg
caggaactgcgcctgaacaactgtggaatgggcatcggtggaggaaagattctagcggcg
gctctgacggtgtgttataaggaatcgagtgctctcggctctcctctgaaactgaaggtg
ttcatcgccggcaggaatcgactggagaatgatggagccacggcgctggcacaggccttt
caggtgattggcagtctagaggaagtgcacatgcctcagaatggaatcaattacccagga
gtcactgctttagccacagctatgcagcacaaccctcagctgcgtgtccttaacctcaat
gacaacaccttcaccaagaaaggagctatagccatggcaaaggcactgcaacacttacgc
aacgtgcaggtgataaactttggtgattgtcttgtacgatcagaaggagctatcgccatc
gcagagaccttgagaaatggactgccactgctgaagaagttgaatctgtcgtttggtgaa
gtcactgaggaagccgctctgactgtggcgacatcagttcaacacaaagatcagttagaa
aaacttgacttgaatggaaactgtttgggtgatgaaggttgtgagaatcttcgagagttg
atggagggcattaacatgagccatgtactcggatctctgagtgatgatgaaggagaaccc
gaggacgacgaggatgatgatgatgatgaagatcacgatgatggtgaggaagaggatgat
gaagatgtggaggaggaagaggaggaggaagaggaagaacaacataacgattcaaatcag
ttttccactccaccctcagctcctcgacctccagacgtctcgtcttttctcagttttcca
tctccagacaaactgctgcgactcggggagaagagatcctctctcatccagcagcaggtg
gatgtgatggatgtgcacaggacagcagaagtgtttctacagatctcgtctgtgtataag
gaggacaacaccgaggtgaagtcggccgtgctggagagtatcgatgctgtcatgagtaaa
gtcttctccacaccttccttccagtggttgagttttgtgtcgtcgctgctggtgatgctc
ggactgctgaagagtgaagataagctgaagccggtgaaggtggtaccaggacatctccag
tgtttagaacatgcagtcaaacagagttatttccctaaagagcacatcgcggttctcaac
gcgttcatggccagacagaataaatcgctggagtcgtgcaacggcgctcgagatcgactg
aagtcaacactccagaagctcacaacagagagctga
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