Triplophysa rosa: 130561126
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Entry
130561126 CDS
T09216
Symbol
ddx39ab
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130561126 (ddx39ab)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130561126 (ddx39ab)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130561126 (ddx39ab)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130561126
NCBI-ProteinID:
XP_057201256
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Position
LG11:805860..809293
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEEEEPQGAPESDIPVGKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQICKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVR
NKTLNLKNVKHFVLDECDKMLEHLDMRRDVQDIFRMTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEADAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaatgacgttgacaacgagctgttggattatgaggaggaagaggagcctcag
ggagccccggagagcgacatcccggtgggcaagaaggacgtgaagggttcctacgtctcc
atccacagctccggcttcagagactttctgctcaaaccagagttactgagggccatcgtg
gactgtggttttgagcatccgtctgaggtgcagcacgagtgcatcccgcaggcgatcctc
ggcatggacatcctgtgtcaggctaagtctggtatgggaaagacagccgtgtttgtgctt
gctaccctacagcagatcgagcctgtggatggacaggtgtcggtgctggtcatgtgtcac
actcgtgaactggcgtttcagatctgtaaggagtatgagcgtttctccaagtacatgccc
acggtgaaggtggccgtgttcttcggtggcatgtctataaagaaggacgaggacgttctg
aagaagagctgccctcacatcgtggtcggcacgcccgggcgaatcctcgctctggtccga
aacaagaccctcaatctgaagaacgtcaagcactttgttctggacgagtgtgacaagatg
ttagagcatctggatatgagacgtgacgttcaggatatcttcagaatgaccccccacgag
aaacagtgtatgatgttcagcgccaccctcagtaaagagattcgacccgtctgccgcaag
ttcatgcaggatccaatggaggtgttcgtggacgatgagacgaaactgacccttcacggt
ctccagcagtactactgcaaactgaaggacagcgaaaagaaccgcaaactcttcgacctg
ctcgacgtcctggagttcaaccaggtggtgatattcgtgaagtctgtgcagcgttgcgtg
gcgctctcacagttactggtggagcagaatttccccgccatcgccatccacagaggaatg
gcgcaggaggagaggttgtcacggtatcagcagttcaaagacttccagaggcggattcta
gtggctacaaacctgttcggtcgaggaatggacattgagagggtcaacatcgtcttcaac
tacgacatgcctgaggattcagacacgtatctgcacagggtggctcgtgcaggtcgattt
ggcacaaaaggtttagccgtcacctttgtttctgatgaggcagatgccaaaatcttgaat
gacgtgcaggatcgatttgaggtcaacgttgccgagttaccagaggaaattgacatttct
acgtacatcgaacagtccagatga
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