Triplophysa rosa: 130561338
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Entry
130561338 CDS
T09216
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130561338
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130561338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
DUF7324
Motif
Other DBs
NCBI-GeneID:
130561338
NCBI-ProteinID:
XP_057201562
LinkDB
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Position
LG11:24891332..24949035
Genome browser
AA seq
2047 aa
AA seq
DB search
MPRDVAGQLKWARLASASASVPRRCRCGAREASALHASLVHPHGRGRLIAQTVPEQMRSD
LALMGRANTGRLEIPLAGVMQSFRERSGFQGNQHCYQQEPQELSRLESYRHHHSQSRQSY
EAHSLPAAGMSTAGAVSKDCYGPQTYPVYTSTSVTQTKKPYRGVKTPNQHLQTGYSNHMG
PVYTAQYMSEGHLQQKWDESAQMTQYEQDVVGRLESGGSGSSQYLEQNMLAISQSQCHLP
SQSSAPVYTSPHQQGIPSNPAPTPLMYPQSHLHFPQQPSSSSSSSSYIEKCNPVQHSYKG
YGIPPNAQYSRQLGNHSNLKQSGYRPQNNYAYQQTPSRSGFEQGSLQGMSGSQENVQKFQ
HFNQPQQNYCITDISVRSPEQYYQTCSPSSSHSPARSVGRSPSYNSTPSPLMPNPDSFQY
GQPPINTGASSSTGLQDQNMLMPPHTHASPSGNHQSQSFSSSMKERFSEKLLSNPSLWSL
NALTSQVENISNNVQHLLLSEALMANKKSSKRNHPKKGEDYRGQLKGIEDSSCPDNQHGP
PPSDAYSIPRSMTAELQEGGYSSSTEEQIDRSFYYFGQDKGQAHTQTHSRQSLDTVSSCS
LNSADDISVRSGDSVRSLQSVASEDNLNCDPRLQRVLPGEEPNSSLGCIRDERSPISAPS
PMKQESNSPPDIKRSESTLKENFEESAWTERMVDEEEIGQRKLFSEYECKGEVTEKPQKW
LEDKKSPSLFHKINKAVLEEGFPYEAEINDYQGLHNKFDSDKVDSAQMDCFSDLNHKGNE
GTEIKFEKFKSEPQPNVETSPPGSSATDLYLSDKQKNSKEENSVESLTCTEGPMDTPEEQ
PPIFSHNSTDVRDEKESLTTSEEVLNNRARPQESFAEVCSTFEEMGNMPQVNTETAQSFA
PDSPHRGSKMRSALCDIAPQLHTGNGGFSALNEKTTPLASARDHHIDRSDAKVLEPDSPQ
LPGKSILHSAPSWADTPPSPKKGDEDMEPGLSCPSAVTPSAKLDPLAPSAHTRMFGKKHA
RGRRRIMHSSVGIRRQLSVEADSAPPSAKNPSMPSSKSALIPDQVETAHQDISSQTPKRV
TDGLQSRMCTRSYGSQSSQKVCPQERRKPGPKPGSKPGLKPGSKQGAKPGPKPGAKSSLK
PAPKSGLKPGPKPGPKSSSKTVPKPGSKPEIMSIVKPGPKPGPKSTEVTKLGPKPGLKAG
LKPGPKPSSKLAIKPGALLGEKPISKPCQTTTELTEGSMPKGPGRPKGLTSKIKSMKQDD
NVPLITDHTKDTRSTSELIQENVTTTLTLGTVVDFVDTSTIEIVGSTLESSLDSKSSAKD
QKSMVLRSRKQAKEKLIEEKEKENDKPTELTSANLMDTKIQDVTVDQPCGIDTSNIELPK
QVELSTDSLQHSNEEIISNKRKYSLQSSDPPKRKKGLKESQTKILGPPSETVTGVCIPKP
KRKRGQDLQAESAINTLTTDIPPTDEIGDMPSVPTQCPTKTKYLPPRKGRGLKYEAMVQK
ITSPGSKKQSLNIQPDIVPEESTSKPGPQVPEQGIVKTPEVAHKEAESTMSTHESQNITG
IQTPRKKRRKWGIVESNDAPDVALEAGSLVINTPRLAKQRAIKNNHEMHLKQRKRRKKGT
EPPDSIPAEEQQEPVQTDILPPPPSTSSFPETVEQTQYEKPPTELCPPLTKPKRGRRPSL
KKKQEDASIHIGDDKVKEKKKPGSKKKIQKSLNVLRVVVKRPKQKTKCSMDLPPTVKGGL
SDLHPTQSDGKGSFRPYVHIDSSLDLASLCTIVNRHEEEQLLTRARKKSAAKTKNLVTVT
ETISDSSIMLQGPIVNKSLTDRCLTCCLCRKPANYRELGDLCGPYYPEDHIPRKNLSLTY
RNDFRQSGDSAQEKKVRCSSDSMNSQSACENAHLEGTNEGGCGHPRRGKRANREQLRTRP
TLRMRFKKLLLLQSRLGEATPPAGEEGTGTMLQRLQMEAEAKEHWAHENCTVWTRGTVLV
AGKLLGLKEAAESAEYAKCSRCQIEGASICCSWKSCTLRYHYVCAKEMGCTFYEETFSIR
CPKHKVV
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgatgtagcaggccagctaaagtgggcaaggttggcttcagcctcagcctct
gtgcccaggcggtgtcgttgtggagccagagaggcatcagcattacacgcttccttggtt
catccccatggacgcgggcgactaattgcacaaactgtgccagagcagatgaggagtgat
ttggcgctgatgggaagggctaatacaggcaggctggagatcccactagctggagtcatg
cagtccttcagagagcggagtggtttccaaggcaaccagcactgctaccagcaggaaccc
caagaattatcgcgccttgaaagttacagacatcatcacagccagtccaggcagagctac
gaggcacactctctgcctgctgcagggatgtccacagcgggagcagtttctaaagactgt
tatgggccgcagacctatcctgtctacaccagcaccagtgttactcagactaaaaaacct
tatagaggagtgaaaactccaaaccagcacctgcagactggctatagcaatcacatgggc
cctgtttacacagcccagtatatgagtgaaggtcacttgcagcaaaaatgggatgagtca
gctcagatgacccagtatgagcaggacgtggtgggacgactggagtccgggggcagtggg
tcatcacagtacctagaacaaaacatgctagctatctctcagagccagtgccatctcccc
tcacagtcttctgcccctgtctatacaagcccacatcaacaaggcattccatctaatcct
gcaccaactcctttaatgtatccacagagccacctccattttcctcagcaaccttcttcc
tcttcttcatcatcttcgtatatagagaaatgtaaccctgtacaacatagctacaaaggc
tatggtataccacccaatgcccagtattcaagacaacttggtaatcacagcaatttaaag
cagagtggatataggccacagaataattatgcttaccagcagacaccctcaagatctgga
ttcgaacagggctccctgcaagggatgtctggttcacaggagaatgttcagaaattccag
cacttcaatcagccacagcaaaactactgtataacagatatttccgtaagatctccggaa
caatactaccagacctgcagtccaagttctagtcattcccctgcaaggtctgtgggaaga
tcaccctcatacaattccacaccatcccctctaatgccaaaccctgattcattccagtat
ggtcaacctcccattaacactggggcttcctcatccacaggtctgcaagaccaaaacatg
cttatgcccccccatacccatgcatcacccagtgggaatcaccagtcgcagagcttttcc
agctccatgaaagagcgtttctctgaaaagcttctttccaacccaagtttgtggagcctc
aatgccctgacatctcaggttgagaacatctccaacaatgtccagcatcttcttctttct
gaggcccttatggctaacaaaaagtctagcaaacgaaaccatccaaaaaagggagaagac
tatcggggccagttaaagggtatagaagattcgtcttgtcctgataaccaacatggtcct
cctccttctgatgcgtacagcattcctagatccatgacagcagaattacaggaaggagga
tactccagcagcaccgaggagcagatagacagaagcttttactattttggtcaggacaaa
ggtcaagcacacacccagacacactcacgacagagccttgatacagtgtcttcctgctcc
ttaaactcagccgatgatatatctgtcaggtctggtgactccgtgcgaagtcttcagagt
gtagcctctgaggataatctcaattgtgaccccagattacagagagtattgcctggagag
gagcccaacagctctcttgggtgcattagagatgagaggtctcccatcagtgccccgagt
cctatgaaacaggagagtaattcaccaccagatataaagcgttcagagagcactcttaag
gagaactttgaggagtcagcatggactgaaaggatggttgatgaggaggaaattggacaa
agaaagctgttttcagagtatgagtgcaaaggagaggtcactgaaaagccacagaagtgg
ttggaggataagaaaagcccttctctttttcataaaataaataaagcagtattagaagaa
ggtttcccgtatgaagctgaaataaatgattaccaagggctacataacaaatttgattca
gataaagtggactcagcacagatggattgtttttctgaccttaatcacaaaggaaatgaa
ggcacagaaataaaatttgaaaaatttaaatcagaaccgcaacccaatgtagaaacatca
ccaccaggcagttcagccactgatctgtatttgtcagataaacagaaaaactcaaaggaa
gaaaattcagttgagagcctcacatgcactgaaggaccaatggacacccctgaggagcag
ccgcctatcttctcccataattccactgatgtgagagatgaaaaggaaagtctgacaacc
tcagaggaggtccttaataatagagcaagaccacaagaatccttcgcagaagtctgcagt
acatttgaagagatggggaacatgccacaagtcaacacagaaactgcacaaagctttgcc
cctgactcaccacacagaggcagtaaaatgaggtcagctttatgtgacattgcacctcag
cttcacactggcaatggtggcttctcggctctcaatgagaaaacaacacctctggcttcg
gctagggatcatcacatcgatcgcagtgatgcaaaggtattggagcctgactctcctcag
ttgccgggcaagtcaatactgcactccgcaccatcctgggctgacaccccaccatccccc
aagaagggagatgaagatatggaaccaggtttaagctgtcccagtgcagtgactccatca
gccaaactagatcctttggccccatcggcacatacaaggatgtttggtaaaaagcatgca
cggggcaggaggagaataatgcattcaagtgtggggatcagaaggcagctaagtgtagaa
gcagacagtgctccaccttctgccaaaaatcccagtatgccctccagcaaaagtgccctt
attcctgatcaggtggaaactgcccatcaggatatcagcagtcaaacaccaaaacgtgtg
acagatggtctacaatcacgaatgtgcactcgctcttatggttcacaaagcagccaaaag
gtttgccctcaagaaagaagaaaaccaggtcccaagccgggctcaaagcctggtctaaag
ccaggttcaaaacaaggtgcaaagccaggcccaaaacctggtgcaaagtctagtttaaaa
ccagctccaaaatcaggtcttaaacctggaccaaagcctggtccaaaatctagttcaaaa
actgttcccaaaccaggctcaaaacctgaaataatgtccattgtaaaacctggtcccaaa
ccaggccccaaatccacagaagttacaaaacttggtccaaaacctggtttaaaggccggc
ctgaaacctggtccaaaacctagttccaaacttgctataaagccaggggctttactggga
gaaaaacctatttcaaagccatgtcaaaccaccacagagctgactgaggggtcaatgcct
aaaggccctggtcgaccaaaaggcctcacctcaaagataaaatcaatgaaacaagatgac
aatgttccattgataactgaccataccaaggacacaagaagtacaagtgaacttattcag
gaaaatgtgaccactacattaactttgggcacagttgttgactttgtggacacctctaca
attgaaattgtgggttccactttagaatcttctctagatagcaagtcttcagcaaaagac
caaaagtccatggtgctgagatcaaggaaacaagcaaaagaaaaattgattgaagagaaa
gaaaaagagaatgacaaaccaactgagctaacttcagcaaatctcatggatacaaaaata
caggatgttactgtggatcaaccatgtgggattgatacttccaatattgagttacctaag
caggtagagctctctacagattcactgcaacattctaatgaagagattatttctaacaaa
aggaaatacagcttacagtcctcagaccccccaaaaagaaagaaaggtttgaaagagagt
caaacaaagatactggggcctccatcagaaacagtcacaggagtctgcattccaaagcca
aagcgaaaaagaggccaagatttgcaagcagaatctgcaatcaacactttgaccacagat
atccctcccactgatgaaattggtgacatgccttctgtacctactcagtgtcctactaaa
acaaaatatttgccacctcgaaaaggcagggggctaaaatatgaggcaatggttcaaaaa
atcacatccccaggatctaaaaaacaatctctaaatatccaaccagatattgtgcctgaa
gaatcaacatcaaaaccaggaccacaggtaccagagcaggggatagtgaaaacccctgag
gtagctcacaaagaagccgagagcacaatgagcacacacgagagccaaaacataacagga
attcaaactcctagaaagaagaggcggaagtggggcattgttgagagcaatgatgcacca
gatgtagccctggaggctgggagccttgttatcaacacacctaggctagccaaacagaga
gccattaaaaacaaccatgagatgcatctgaaacaacgtaaaaggagaaaaaaggggacg
gagccaccagatagcatacctgctgaggagcaacaggagcctgtccagactgatattctg
ccaccccctccatccacctcctcttttccagaaacagttgaacaaacacagtatgagaag
ccaccaacagaattatgcccgccattaacaaaacccaaaagaggcaggcggccatcactc
aaaaagaaacaagaggatgcctcaatacacattggagatgacaaagtaaaagagaaaaaa
aagcctggatccaaaaaaaagattcaaaagagtcttaatgtcctcagagttgtagtgaaa
agacccaagcaaaagactaaatgcagcatggatctccctccaacagtgaagggaggatta
tcagacttgcatccaacacagagcgatggcaaaggctctttcaggccgtacgtgcacatt
gacagctctttggatctagcgtcactttgtacaatcgtcaacaggcatgaggaagagcag
ctgctcacccgggcaagaaaaaagagcgcagctaaaacaaaaaatctagtcacagttacc
gagacaatatcagactcctcaataatgctccaggggcccatagttaacaaaagtctaact
gacaggtgtcttacatgctgcctatgcagaaagccagcaaattacagagagcttggagac
ttgtgtggcccttattatcctgaggaccatataccacgaaaaaacctgtctttaacatac
agaaatgacttcaggcaaagcggtgacagtgcacaagagaagaaggtcaggtgtagttca
gacagcatgaactcacagagcgcttgtgaaaacgcacatctggaggggacaaacgaagga
ggttgcgggcatcccagaagggggaaaagggctaatagggaacagttaagaacccgcccc
accttgcggatgaggttcaaaaaactgctactgctgcagagcaggcttggtgaagctact
ccccctgctggtgaggagggaactggaactatgctccaaagactgcagatggaggcagag
gctaaagagcactgggctcatgaaaattgtacggtctggaccagaggaacagttttggta
gcaggcaaacttttggggctgaaggaagctgctgagagtgctgaatatgcaaaatgctct
cggtgccagattgagggagcgtccatatgctgcagctggaagagctgtactctgaggtac
cattatgtctgcgccaaagagatgggctgcacattttatgaggagaccttctccatcagg
tgtccaaaacacaaggtagtttaa
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