Triplophysa rosa: 130561402
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Entry
130561402 CDS
T09216
Symbol
tnpo2a
Name
(RefSeq) transportin-2
KO
K18727
transportin-2
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130561402 (tnpo2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130561402 (tnpo2a)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130561402 (tnpo2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
TOR1L1_N
HEAT_2
IBN_N
Vac14_Fab1_bd
HEAT_EF3_N
Arm
TPR_IPO5
HEAT_MROH2B_C
Cnd1
TPR_DNAAF5
PDS5
Adaptin_N
HEAT_GCN1_C
MMS19_C
Dopey_N
CLASP_N
Ltn1_1st
INTS7_N
CEP104-like_TOG
UNC45-central
HEAT_MROH2B_1st
VPS15-like_hel
TPR_TTI1_C
RTP1_C1
DUF1475
DUF2573
DUF3689
Motif
Other DBs
NCBI-GeneID:
130561402
NCBI-ProteinID:
XP_057201682
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Position
LG11:complement(5235247..5246095)
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AA seq
889 aa
AA seq
DB search
MEWQADEQGLQQVLQLLRDSQSPDTATQRSVQQKLEQLNQYPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKVHYQNFPPAVAHFIKQECLNNIGDPSPLIRATIGILITTIATKGE
LQTWPELLPQLCNMLNSDDYSTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALAADEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIVEYMLQRTRDPDENVALEACEFWLTLAEQPICKEAISGHLAQLVP
VLVNGMKYSEIDIILLKGDVEEDEAVPDNEQDIKPRFHKSRTVTLRHEGGEGGEGEDSDE
DDDDDDDSLSDWNLRKCSAAALDVLANVFRDELLPPLLPVLKGLLFHPDWIVKESGILVL
GAIAEGCMQDMVPYLPELIPHLIQSLSDKKALVRSISCWTLSRYAFWVVSQPADSFLKPL
MTELLRRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFSKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKNLAQAMMYNQHPDQYEAPDKDFMIVALDLLSGLAEGLGSHVDQ
LVARSNIMTLLFQCMQDSMPEVRQSSFALLGDLTKACFIHVKPCIAEFMPVLGLNLNPEF
ISVCNNATWAIGEIAIQMGTEMQPFMALVLSNLVDIINRPNTPKTLLENTAITIGRLGYV
CPQEVAPILPQFIQPLCTSLRNIRDNEEKDSAFRGICVMIGANPGGVVQDFIFFCDAVAS
WVNPKDDLRDMFYKILHGFKDQVGDDNWQQFSEQFPPVLKERLSACYGV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcaggcggatgagcaaggcctgcagcaggtcctccagcttttgagagactcg
caatccccagacacagccacacagagatctgtacagcagaaacttgagcaattgaaccag
taccccgatttcaacaactatctcatctttgtgttgaccagactgaaatctgaagatgag
cccacacgatctctcagcggtttgatactgaagaacaatgtgaaagttcattatcagaac
tttcctccggcagtggcacacttcatcaagcaggaatgtctaaacaatatcggcgaccct
tcgcctctcatccgggccactattggcatccttataacaacaattgccaccaaaggtgag
ttacagacatggccggagctacttccccagctctgtaacatgctcaattcagatgactac
agtacatgtgagggctcctttggagctttgcagaagatctgcgaggactcgtccgagctg
ctggacagtgatgctctcaatcggcctcttaacatcatgattcccaaatttctgcagttc
ttcaagcactgcagccccaagatcaggtctcatgctattgcctgcgtgaaccagtttatc
atcggcagagcacaagccctcatggacaacattgacacgtttattgagagtctgtttgcg
ctggcagcggatgaggattcagaagtgaggaagaacgtgtgcagagctctggtcatgctg
ctggaggttcgaattgaccggctcatcccacacatgcacagtatcgttgagtacatgctc
cagcgcacacgtgacccggatgagaacgtggctcttgaggcctgcgagttctggcttacg
ctggctgagcagcccatctgtaaggaagccatatccggacaccttgcacagttagtcccg
gttctggtgaacggaatgaaatactcggagattgacatcattttattaaagggtgacgtg
gaggaggatgaggccgtgccggacaacgagcaggacatcaagccgcgcttccacaagtct
cgtaccgtcacccttcgtcatgagggcggtgagggaggggaaggggaggacagcgatgag
gacgacgacgatgatgacgacagtctgtccgactggaacttacgcaaatgttctgctgct
gctcttgatgtcttggcaaacgtctttcgggatgagttgctgccccctttgcttccagtt
ctgaagggtctgttgttccacccggactggattgtcaaggagtccgggatcctggtgttg
ggggctattgctgaaggctgcatgcaagacatggtgccgtaccttcccgagctgattcca
cacttgattcagtctctatctgacaaaaaagctttggttcgctccatctcctgctggact
ctgagccgctatgcattctgggtggtcagccagccggccgactccttcctcaaaccactg
atgacggagctgctcagacgcatcctcgacagcaacaaaagggttcaggaagcggcctgc
agcgcatttgccacactggaagaggaagcctgtacagaactggttccctacttgagtttc
attctggacacactggtgtttgcctttagcaagtaccaacacaagaacctgttaatccta
tacgatgccatcggaacacttgccgactctgttggtcaccacctcaaccagcctgaatac
atccagaagcttatgccgcctcttattcagaagtggaatgaactgaaggacgaggataaa
gatctgtttccattattggagtgcctgtcttcagtggcgacagctctccaaagtggcttc
cttccctactgtgaacccgtctatcagcgctgtgtcacactggtccagaagaacctcgct
caagccatgatgtacaatcagcacccagatcagtacgaagcccctgataaagacttcatg
atcgtggccctggatcttctcagcggtctggctgaaggtctcggcagtcacgtggatcag
ctggttgcccgcagcaacatcatgaccctgctgtttcagtgcatgcaggactccatgccg
gaagtgagacagagttccttcgcgctgctgggcgacttgaccaaagcgtgcttcattcac
gtgaagccctgtatcgctgagttcatgcctgttctgggtctcaacctcaaccctgagttt
atatcggtgtgtaataatgccacatgggccattggcgagatcgctatacagatggggaca
gagatgcaaccgtttatggcccttgttcttagtaacctcgtggacatcatcaacaggccc
aatacacccaaaacactgctggagaacacagccatcaccattggtcgcctgggctatgtg
tgtccacaggaagttgcgcccatattgccgcagttcattcaacctttgtgcacatcactt
cgaaacattcgggacaatgaagagaaggactctgccttcaggggcatttgtgtgatgatc
ggggcgaatcctggaggagtggtgcaagactttatatttttctgcgatgctgtggcctcc
tgggtaaatcccaaagatgatttgagggacatgttctacaagattttgcacggtttcaag
gatcaggtaggagatgataactggcagcagttctccgaacagtttccacctgtgctgaag
gagagactttcagcctgttatggcgtgtag
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