Triplophysa rosa: 130561429
Help
Entry
130561429 CDS
T09216
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130561429 (ctr9)
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
130561429 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_10
TPR_17
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
130561429
NCBI-ProteinID:
XP_057201738
LinkDB
All DBs
Position
LG1:complement(33687058..33698752)
Genome browser
AA seq
1164 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDTKKDLINQSTLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFQFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASPTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKEHLKKVTVQYSDDVEAWIEVAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATAEMSDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARSLFKCGKLQECKQTLLRARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
HRAKQEHEREQLRQQMVREQEERRNREAVEQKKLLEQRAQFVEKTKNLLTFSEGMKDTAR
EKKKGGSGRRKKGGDFDDFVNDDSDEELPLKKKKKKKVGSGSEVEDEGEEGEKKSRKRRK
RPFQREDEGSDQEGTSRPKKQRKPKERKRIEKPERMPSSLKGKIKSKAIISSSDSSSDED
GLKIAEDRNPKDSGSGSDDDGDEGHRKRIASDSDSNVERNQSGSEAGSPQRSGNSDDSGS
ERPVKRRRPQQQSDSEQSDNQSRKSRSEGSDDESPAGSPAAASDQGSDNEGSPQRSENES
EQEGSNNEASNNEASNRGSDDDSD
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagggtccattgaaatccctctgcgggacacggatgaggttatcgaacttgat
tttgatcagcttcccgaaggagatgaggtcatcagtattctcaaacaggagcacacacag
ttgcacatatggatcgcacttgccttggagtactacaaacaaggaaagacagaagatttt
gtcaagttgctggaggcggcacgtatcgatggaaacctcgattacagagaccatgagaaa
gaccaaatgacgtgtctggacactctcgcggcttactatgtccaacaggctcggaaagag
aagaacaaagataccaagaaggaccttatcaaccagtccactcttctgtacaccatggca
gacaagatcatcatgtatgatcagaaccatctgctgggcagagcttgcttttgtctgctg
gaaggggataaaatggaccaggcagacgctcagtttcaattcgttcttaaccagtcaaca
aacaacattcctgcacttctgggtaaggcgtgtatttccttcaacaaaaaggattacagg
ggagctctggcgtactacaagaaagctcttcgcaccaatcccggctgtccagccgaggtg
aggcttggcatgggccactgctttgtcaagctcaacaaactggagaaagctcggttggct
ttcggcagagccctggagctaaactctaaatgcgtgggggctttggtgggtttggctgtg
ctggagctgaacaacaaagaggccgactccatcaaaaacggagttcagctgctttccagg
gcatacaccattgaccctagcaaccccatggtgctcaatcacctcgccaaccatttcttc
ttcaaaaaggactatagcaaagtgcagcatctggctctgcacgcttttcacaacacggaa
gtggaagccatgcaggcggagagctgctatcagttagctcggtccttccacgtccaggag
gattatgaccaagctttccagtactactaccaagccactcaattcgcatcacccaccttt
gtactgcccttcttcggcctgggccagatgtacgtataccgtcgggacaaagagaacgct
gcacagtgctttgaaaaggtcctcaaggcttatccgaataactatgaaaccatgaaaatc
ctcgggtcactttatgccacatcggacgatcaggagaagcgagacattgctaaggaacat
ctgaaaaaagtcactgtgcagtattcggatgatgtggaagcgtggattgaagttgcccag
attttggaacaaacagacattcagggagctctgtcggcatatggcactgccactcgcatc
ctccaggagaaggtccaagccgatgtgccccctgagatccttaacaatttgggggctttg
cactttcgtttgggaaatcttggagaggccaaaaaatacttcttggcatctttggagagg
gcgaaagccgaaggtgaacatgacgaacactattacaacgccatctctgtcaccacctcc
tataacctggcaagactctatgaggccatgtgcgagttccatgaggccgagaagctttac
aagaacatcctgagagagcatcccaactatgtcgactgttacttgcggcttggcgcaatg
gcacgtgacaaaggaaatttctacgaggcctctgattggtttaaagaagctcttcagatc
aatcaggaccaccctgatgcctggtcgttgattggtaacctccatctggccaaacaggag
tgggggcccggccaaaagaagtttgaacgtatcctaaagcagccttccacccagaacgac
acctactctatgctggcgctgggcaacgtgtggcttcaaacgctgcaccagcccaccaga
gatcgagaaaaggaaaagcggcaccaggatcgagctctggccatctacaaacaagttctg
aggaatgatgccaaaaatctatatgctgccaatggcataggtgcggtgttggcacacaag
ggatatttccgagaagcgcgggacgtctttgcccaggtgagagaagctacagcagagatg
tctgacgtgtggttgaacctcgcacacatctacgtggaacagaagcagtacatcagtgct
gtgcagatgtatgagaactgcctgaagaagttctacaaacatcagaacacagaggtgctg
ttgtatctggcccgttcgctcttcaaatgtggaaaactgcaagagtgtaaacagacgctt
ctgagggctcggcatgtggctcccagtgacacggtgctgatgtttaacgttgcgctggtg
cttcagaggttggccacacttgttctgaaggatgagaagagtaacttgaaggctgtactg
agtgcagtgaaagagctggagctggctcacaggtacttcagctatctcagtaaggccgga
gacaaaatgagatttgatctagcgctggctgcaagcgaagccaggcagtgttcggatctg
ctaagccaggctcagtaccatgtggcccgagctcgtaaacaggacgaggaggagaaggag
catcgtgctaaacaggagcacgagagggagcagctgcggcagcagatggtgcgagagcaa
gaggagaggaggaaccgggaggctgtggagcagaagaaactcctggagcagagagcacag
tttgtagagaagaccaagaacctactcaccttctcagagggaatgaaagacacggctagg
gagaagaagaagggaggcagtggacggcgcaagaaaggaggcgactttgatgactttgtc
aatgatgactctgatgaggagctcccccttaagaagaagaaaaagaagaaagttgggagc
ggcagtgaggtggaggatgaaggagaagagggagagaagaaatctcgcaagagaagaaag
agaccttttcaaagagaggatgaaggttcagatcaagaaggcacctcgaggcccaaaaag
caacgcaaacccaaagagcgcaagaggattgagaagcctgagcgcatgccgtcatcgctt
aaaggaaagatcaaatctaaagccatcatttcctcctccgattcctcgtctgatgaggat
ggactgaaaatagcagaagaccgaaaccccaaggacagcggctcaggttcagatgacgat
ggtgatgaaggccacaggaaacgcatcgcgtccgacagcgattccaatgtggagcgtaac
cagtcgggcagcgaggccggcagcccccagcgctctggaaactcggatgattctgggagc
gaacgacccgtgaagaggagaagaccgcagcagcaatccgactcggagcagtctgacaac
cagagtagaaagagccgttctgaagggtcagatgatgaatccccggctggatctccagcc
gctgcgtcagatcagggctcggacaacgagggctctccgcagaggtctgagaacgaatct
gagcaagagggctccaacaatgaagcctccaacaatgaagcctctaacagaggctcagat
gatgacagtgactga
DBGET
integrated database retrieval system
