Triplophysa rosa: 130561443
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Entry
130561443 CDS
T09216
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
tros
Triplophysa rosa
Pathway
tros04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130561443 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tros04054
]
130561443 (dhx58)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130561443 (dhx58)
Pattern recognition receptors [BR:
tros04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
130561443 (dhx58)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
NLRC4_HD2
Motif
Other DBs
NCBI-GeneID:
130561443
NCBI-ProteinID:
XP_057201766
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All DBs
Position
LG11:9374088..9381480
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AA seq
680 aa
AA seq
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MEIKLRVYQDEVVQTALRGENSIIWLPTGGGKTRAAVYVTKKHLETKANAKVAVLVNKVH
LVDQHFEKEFSPYLGKDYRIMAISGDSDEKDFFGHVVKKSDVVICTAQILENALTNKDEE
KHVELTDFTLLVIDECHHTHKDAVYNKIMGRYVEKKLRKGGNLPQVLGLTASPGTGGNRT
LDKAVEHVQQICANLDSVIVSTKNYKPVLQKVVPRPMKQYDIVEKRALDPFGDHLKSMMS
MIHEFMPSTASAGLREKGTQEYENDVVDLHQTGVHQENRLIAQCALHLRQYNDALLINDT
VRMVDAFRLLDDYYKSRENNLLDVTYYFLMGLFEENRVELKQLASTPLYENPKLAKLEHT
LLEQFKDQSSRGIIFSKTRKGTHCLHEWVSCNPELRRANICAGILTGAGVGANHMTQRKQ
KETIKAFRDGELNLLVSTSVAEEGLDIKECNVVVRYGLLTNEIAQQQASGRARAENSVYS
VVATEGGRELRRELTNEYLEELTGKAINQVQSMNPREFRIKIFEIQKTDVLARMQAEKNR
GKKEQRYNPAEVQFQCKGCFTPVCYGKDIRQIENSHRVNTNPHFERYYKVGGPVHLERQF
EDWEPGRVIECRRCGEHWGMEIKFKKGAILPCLKIQSFSMSTPQGKCSPKKKWSKVEFKV
EEFDFTKYVEDHLSDLDLDD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagattaagctacgagtgtatcaggatgaggtggtgcagacggctctgagaggagag
aacagcatcatctggctccctacaggtggagggaaaacccgggctgcggtctacgtcacc
aagaaacacctcgagaccaaagccaatgctaaagtggcggtgcttgtcaacaaggtgcac
ctggtagaccagcactttgagaaagaattcagtccttatcttgggaaagattataggatc
atggccattagcggggacagcgatgagaaagacttcttcggacatgtggtcaagaaatca
gatgttgtgatctgcactgctcagatcctggagaatgccctgaccaacaaggatgaggag
aaacacgtggagctcacagacttcaccctgctggtcatagacgaatgccaccacacacat
aaggatgccgtttataacaaaatcatgggccgctatgtcgaaaagaaattgagaaagggg
ggaaatttgcctcaggttttgggtcttacagcatcacctggtactggaggaaataggaca
ctggataaagctgtggaacatgtccagcagatctgtgccaatctggattctgtcattgtg
tccaccaagaattacaaaccagtgctgcaaaaagtcgtccccagacccatgaagcaatat
gacattgttgaaaaaagagctctggacccgtttggggaccatctgaagtcaatgatgtca
atgattcacgagttcatgccgtcaacggcgagtgcgggtctgcgtgagaagggcacccag
gaatatgaaaatgatgtggtggatctacaccaaacaggtgtacatcaggagaacaggctg
atagctcagtgtgctctgcatttgcggcaatacaatgatgctctcctcatcaatgacact
gttcgcatggtggatgcgttccggcttctagatgactactacaagtcaagagaaaacaac
ttgctggatgtcacttactattttctcatgggactttttgaagaaaaccgtgtagaacta
aagcagctggcatcaacccctctctacgaaaaccccaaactggccaagttggagcacacg
ctgctagaacagtttaaggaccaaagttctcgcggtatcatcttctcaaagacccgcaag
ggaacccactgtcttcatgagtgggtgagctgtaaccctgagctgcggagggcaaacatc
tgtgctggcattcttaccggagcgggcgtaggggcaaaccacatgacccagaggaaacaa
aaggagacaatcaaagcatttcgagatggagaactcaacctcctagtatccaccagtgta
gctgaagaaggacttgacatcaaagaatgtaacgtggttgtacgttacgggctgttgacc
aatgaaatcgctcagcagcaggccagtgggcgggcccgtgctgagaacagcgtctactct
gtggtggctacagaaggggggcgtgaactacgcagggaactcaccaatgagtacctagaa
gaactgaccggaaaagctattaaccaagtgcaaagcatgaatcccagggagttcagaata
aagatctttgagattcaaaaaacggatgttttggctcggatgcaggctgagaagaacagg
gggaaaaaagagcagcgctacaatcctgctgaagtgcagtttcagtgtaaagggtgcttt
actcctgtttgctacggaaaagatatcagacaaatagagaattcacaccgtgttaacacc
aatcctcattttgagaggtattataaagtaggtgggccggtgcatctggagagacagttt
gaagattgggagcctggaagggttattgaatgcagacgttgtggagagcactggggaatg
gagattaaattcaagaaaggggcaatactcccttgtttgaaaatacagagtttttccatg
agcactcctcaaggcaaatgctcacccaagaagaagtggagtaaagttgagttcaaagtg
gaagagtttgactttactaagtacgtggaagaccatttatctgacctggacctagacgac
tga
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