Triplophysa rosa: 130561544
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Entry
130561544 CDS
T09216
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
tros
Triplophysa rosa
Pathway
tros04136
Autophagy - other
tros04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130561544 (wipi2)
04136 Autophagy - other
130561544 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130561544 (wipi2)
03029 Mitochondrial biogenesis [BR:
tros03029
]
130561544 (wipi2)
Membrane trafficking [BR:
tros04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
130561544 (wipi2)
Mitochondrial biogenesis [BR:
tros03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130561544 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
Beta-prop_HPS5
VID27
Motif
Other DBs
NCBI-GeneID:
130561544
NCBI-ProteinID:
XP_057201940
LinkDB
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Position
LG11:complement(16519291..16526509)
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AA seq
427 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDNLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALACDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKSVPQEEPTTWTGYFGKVLMASTTYLPAHVTEMFTQ
GRAFATVRLPFSGHKNICALAIIQKIPRLLVAASDGYLYLYNLDPQEGGECTLMKQHKLD
GSVEPANEILDQTAHDRPLVAQTYSAAVAKGYTEDQGAVGGAGVEDEMSALHLDEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aatcaggataacacatccttagctgtcggtaccaagtctggatacaagtttttttccttg
tcatcagtggacaatttggaacagatatatgaatgtactgacacagaggatgtgtgtatt
gtggaacgactgttctccagcagccttgttgctatcgtcagccttaaggcacctagaaaa
ctgaaggtgtgtcatttcaagaaaggaacggagatatgcaactacagctactcaaacact
atactggctgtgaaactaaacagacagagattgatagtgtgtttagaggagtcactgtat
atccataacattagggatatgaaagtactacataccattcgagagacccctccaaatcct
tcaggactatgtgccctgtcaatcagtaatgacaactgctacttagcctatccaggaagt
gcaacaattggggaggtgcaagtttttgacacggtgaatctgagggcagcgaatatgatc
cctgcccatgacagcccattagcagcactggcgtgtgatgcaagcggcactaaactggcc
acagcctctgagaagggcactgttatccgtgtgttctccattccggagggccaaaagctc
tttgagtttaggaggggagtaaagagatgtgtcagcatctgctcccttgccttcagtatg
gagggactctacctatctgcctcaagcaacacagagacggttcatatttttaagctggag
acgcagagagagaagtcagtgcctcaagaggaacccactacttggacgggatactttggc
aaagtattgatggcctccacaacgtatctgcctgcacatgtgacagagatgttcactcaa
ggaagggcattcgctacagtcaggttgcccttctcaggtcacaagaacatctgcgctttg
gccataatccaaaagattccacgccttctggtggcagcctcggatggttatctttacttg
tacaacctggaccctcaggagggtggagagtgcacactaatgaaacagcataagttagat
ggaagcgtggaaccagcaaatgaaattctcgatcagactgcacatgaccggccacttgtg
gcacagacctacagtgctgctgttgccaaaggttacactgaggatcagggagctgtaggg
ggcgctggagtggaggatgaaatgagcgctctacacctggatgaagagaacgagcagcct
cccttaatcctggaaacggactga
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