Triplophysa rosa: 130561581
Help
Entry
130561581 CDS
T09216
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130561581 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130561581 (thoc6)
03041 Spliceosome [BR:
tros03041
]
130561581 (thoc6)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130561581 (thoc6)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130561581 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_CAF1B_HIR1
EIF3I
WD40_like
WDR54
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
130561581
NCBI-ProteinID:
XP_057201995
LinkDB
All DBs
Position
LG11:12691125..12695090
Genome browser
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDTSEKSQKPILNFTAHD
GPVFSLLSTDTHLLSTGNGEIKAWSWAELIKKSTKATWTRKPNYETSLEIPEINAMIINP
KDNSLIVGGGDNNIHIMDMETGIFKSVLKGHTDYIHCLCFREREGEILSGGEDGAVRIWD
CRTNRPIHCIEMFKYEECARPQFGKWISCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFP
LPGCQREAVFYQDLIFAVGEGPNVSHCLHGGTVKAQIPCTPLSLNTLALNLKNTEHRVMT
VGGSSHQIDVFTNFSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagttgagctcctgcatatgtccgtgttctcgcagagtttctctccctgcggt
cggttccttgcagcgggtaataactatggagagatagcggtgtttagtttatcggctgca
ctgagtccagatacatcagagaagagtcagaagcccatccttaactttactgcccatgat
ggtccagtgttttctcttctttccactgatactcatctcttgagtactgggaatggagaa
ataaaggcctggagttgggcggagctcattaaaaagagtaccaaagccacctggacaagg
aaacccaattatgagactagtcttgaaattccagagattaatgcaatgatcattaatcca
aaggacaacagtttaatagtcggagggggtgacaacaatattcacatcatggacatggag
actggcatctttaagtcagtactaaagggtcacactgactacattcactgcctatgcttt
agagagagggaaggggagatactctctggaggagaggatggtgctgtgaggatatgggac
tgtcggacaaatcggccaattcactgtattgaaatgttcaaatatgaggaatgtgcacgc
ccacagtttgggaagtggattagctgtcttgccacagattctgattggatgctatgtggc
ggagggccttctctctctttatggcaccttcggtctatgtctcctacctcagtcttccca
ttgcctggctgtcaaagggaagctgtgttttaccaggacctgatttttgcggtaggtgag
gggccaaatgtatctcactgtttacatggagggacagttaaagctcagattccctgcact
cctttatcactcaacacactggctctcaatcttaaaaacactgaacacagggttatgaca
gtagggggcagcagtcaccaaattgatgtttttaccaacttcagttacagagctttttct
ctgtcgttctga
DBGET
integrated database retrieval system