KEGG   Triplophysa rosa: 130561581
Entry
130561581         CDS       T09216                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
tros  Triplophysa rosa
Pathway
tros03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130561581 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tros03019]
    130561581 (thoc6)
   03041 Spliceosome [BR:tros03041]
    130561581 (thoc6)
Messenger RNA biogenesis [BR:tros03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     130561581 (thoc6)
Spliceosome [BR:tros03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    130561581 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_EML WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 EIF3I WD40_like WDR54 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 130561581
NCBI-ProteinID: XP_057201995
LinkDB
Position
LG11:12691125..12695090
AA seq 323 aa
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDTSEKSQKPILNFTAHD
GPVFSLLSTDTHLLSTGNGEIKAWSWAELIKKSTKATWTRKPNYETSLEIPEINAMIINP
KDNSLIVGGGDNNIHIMDMETGIFKSVLKGHTDYIHCLCFREREGEILSGGEDGAVRIWD
CRTNRPIHCIEMFKYEECARPQFGKWISCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFP
LPGCQREAVFYQDLIFAVGEGPNVSHCLHGGTVKAQIPCTPLSLNTLALNLKNTEHRVMT
VGGSSHQIDVFTNFSYRAFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggtccagttgagctcctgcatatgtccgtgttctcgcagagtttctctccctgcggt
cggttccttgcagcgggtaataactatggagagatagcggtgtttagtttatcggctgca
ctgagtccagatacatcagagaagagtcagaagcccatccttaactttactgcccatgat
ggtccagtgttttctcttctttccactgatactcatctcttgagtactgggaatggagaa
ataaaggcctggagttgggcggagctcattaaaaagagtaccaaagccacctggacaagg
aaacccaattatgagactagtcttgaaattccagagattaatgcaatgatcattaatcca
aaggacaacagtttaatagtcggagggggtgacaacaatattcacatcatggacatggag
actggcatctttaagtcagtactaaagggtcacactgactacattcactgcctatgcttt
agagagagggaaggggagatactctctggaggagaggatggtgctgtgaggatatgggac
tgtcggacaaatcggccaattcactgtattgaaatgttcaaatatgaggaatgtgcacgc
ccacagtttgggaagtggattagctgtcttgccacagattctgattggatgctatgtggc
ggagggccttctctctctttatggcaccttcggtctatgtctcctacctcagtcttccca
ttgcctggctgtcaaagggaagctgtgttttaccaggacctgatttttgcggtaggtgag
gggccaaatgtatctcactgtttacatggagggacagttaaagctcagattccctgcact
cctttatcactcaacacactggctctcaatcttaaaaacactgaacacagggttatgaca
gtagggggcagcagtcaccaaattgatgtttttaccaacttcagttacagagctttttct
ctgtcgttctga

DBGET integrated database retrieval system