Triplophysa rosa: 130561658
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Entry
130561658 CDS
T09216
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
tros
Triplophysa rosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
FERM_f0
SH3_9
SH3_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
130561658
NCBI-ProteinID:
XP_057202102
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All DBs
Position
LG11:complement(11681341..11769369)
Genome browser
AA seq
2450 aa
AA seq
DB search
MTMPLSPLSSDEEHQRMLGNSQHLYPGAEEEEEEEEEEEEMDDDGIDEEGEEENGELELD
DEEEADDDDDIRRLRGGREEGHRQKGTMAGRTSGDRQMRPGNPGHAANPYSSNPGPTHQQ
TATQQQQQQRKLRERSSSNPPEDAHIAMMVFRIGIPDIKQTKCLRFNPDATVWKAKQQVL
CSLTESLRDVLNYGLFQPATDGHDAKFLEEERPLREYPQSFEKGVPYLEFRYKTRVYKQT
NLDEKQLAKLHTKASLKKFMDYIQTGAVEKVSKLIDKGLDPNYHDPDTEETPLTLAVQTE
PGGSESIRVLVMGGAHIDFRAKDGLTPLHKAVRTHRHTALLTLLSLGASPDYKDRRGLTP
LYHTVLIGGDTSCCETLLYHRAKLGLRDENGWDETHQACQNGNSQHLEHLLFYGADSSSQ
NASGNTALHICALYNKESCARILLYRGASKDTKNNSGQTPFQVAVMSGHFELGEIIKNHR
ESDVVPFLESPKYAPQRRESGRTLGLPHPHPFLRANSDNSMNVPDWIAFPNAPGSNIVSV
QGQKHGGTLRSSSSPRGARTRSPSRGRTGDRDERSRQPRGRQGAGSISSQGTVSGQRRRL
YSAVPGRVFVATRSHSAQGDREISLNKGDKVKVLSVGEGGYWEGTVRGRTGWFPSDCVEE
VALRSLDNRSESRSERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDNEGFGFVLR
GAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV
NMIRQGGNSLMVKVVMVTRNPDLEEGVRKKIPQQSKRLSTPAIALRSKSMTSELEEMVDR
ASAPWKKKSEFESSQATEKKRTVYQMALNKLDEILAAAQQTISTNEAPGPRVQGIKRERG
RGFYNEPSFDQSGMGMTTSGAGLGYDRGQFVPGHGPPHGMLRQKSIGVPEEEKQHLHPPA
MKFARSLSVPGPDDIPPPPTTAPPEPPFSSAPPLGFRGKTPQQPSVSVSQSTSSSAHYQL
YSQSIHVAHGARDRSPGPPTGSGTGDQPLPYSHAQAHPSVPSRTASRKVIGYTGDLAGAG
GGPGAKAAALRRGYSNAVPPSSVATVIPQQQQTTQSQPSRLDRSAVGTGGVPKGGGRRGK
GPLVKQSKVEDLRGGQGTLEGKGSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSVEAEPPP
PEESDSSKPQPVVPPPAPTVPPPAPPSMPAPPPPSASSLRTQESLDYTSQFGAAIVGAAR
RDRERFHEARRKSASFFLSAEEELGGVGGVIGRTQTSQQQLSTQPSPRLRPSKSIDEGMF
SGDTFIHHTRSMPPAFGLPEYSSPAPPGDYQPKSVPADFYGAGGRQQQQQQPSTTTFIHP
LTGKVLDPSSPLGLALAARERALKDDGRIRRERTPEHHFSRQLSSIGAFPSSTAQPTSHL
SYSMTSSSSAISSAAQSASSSSYLVTSSSLAATTTSTRPPSPRILRGAGSSWGEETRVGD
RAEREAAGASAPREGLRVRFSEDKTVHTHHYQSQHYQPTYKERDRERQRERSREREMEKA
QTQLQQQSIQPSPRRPSFLRMESEAGSYILSLTPPSPPPAVAPTRPSAGGGGGSGSGLMV
LPPPAPSVDADDEFVFAEPLPPPLEFANSFDRGLGYHSMMYNNLSARQQLHQPPPPPPPP
PPPPPKDSFMAGFPLHTPLPSPQAGDSTTSSLTSYDSEVANLTQSAPSPSPSYPNPLPPP
SPSTLQPAAPPPPPSVSPPPPPTSYHRPFGLSQSQHLYNNTHPPERSSSPTPPPHSIPAP
PAYRGPPVSTPATSVSLRGSSTVTASCSSTASTSTVSAIATTAAIVTPHTRMATVSTVAT
GSSRRPSAEHHPPPSAAAAMTSESQETVVDSGIEELDSRSSSDHHLDSILALSGSGVRER
LERAGLGSLGGSGGTTESDRTSGADFLESYMSYLDGQTFEMHNAKATSTASTYPKTQRYR
EGSRAGDLRRQTSTAPPAYHRRREEEEEEDEAQEAEEEYINARDGYGMGEGPGIARSSVM
YFDRPRTPEMKPLWGEGSTGAAQSVGEGAGQAGGTYMEARKLHPPMSSMKASIINELSSK
LHQRSKGTESWGAQRSLSRHRFSEDSTGALSPPSVRSSSPSPVQLSQPALSPSPTPSSQP
IYPNWARSPSPQPPANSSQPPPRSHSPVSPSSYSPYPTSPKHRPVYRTKALEFQFIPSRE
SRKAESHHAQRRRAPSPLISPSDRPKLGPPRPSSLPILPTTPLYSSLYDLRGSVTPPSPA
NPLGDPYFSPSPPLFATSGAPPPPNSSLVVSRSLSPTHFLSGTSSPPLHHIPPPTCLSYP
HLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGTHLPSLTKEDYLD
LGVTRVGHRMNIERALRRVMDRLSSSPFPIPALSPRDERTDRRRDEANRS
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgccgctcagccccctctccagcgacgaggagcaccaaaggatgctgggaaac
agtcaacacctatatccaggggcagaagaagaggaagaagaggaagaggaggaagaggaa
atggatgatgatggcatagacgaggaaggagaggaggagaatggagagctggagttggat
gacgaagaggaagcggatgatgatgatgacatcaggcgtttgaggggaggcagggaagag
gggcacaggcaaaaaggcacaatggctggacgaacctcaggagacagacagatgcggccc
gggaacccgggccatgccgccaacccttattcgtccaaccctggacccactcaccaacag
acagctactcagcaacaacaacagcagcgtaagctgagggaacggagttctagcaaccca
cccgaagatgcacatatagctatgatggtgtttcgcattggcattcctgatatcaaacaa
acgaaatgtctgcggttcaacccagacgcaacagtgtggaaggcaaagcagcaggtgctg
tgtagtctgaccgaatctctacgagacgttttgaactacggccttttccaacctgctact
gatgggcatgatgccaagtttttggaggaggagaggccgctcagagagtacccccaatcc
tttgagaaaggagtaccctacctggagttccgctacaaaaccagggtgtacaaacagaca
aatctagatgagaaacagctggccaaactgcacactaaggctagtctaaagaagttcatg
gactacatccagactggcgcagtggaaaaggtatccaaacttatagacaaagggcttgac
cccaactaccacgaccctgatacagaagagaccccactcactttggcagtacagacagag
ccgggtggaagtgaaagcatcagagttctggtgatggggggagctcacattgacttcagg
gcaaaggatggcttgacacctctccacaaggccgtcagaacacaccgacacactgcccta
ctgacactgttgtctttgggcgcgtctcctgattataaagaccgtcgtgggctgactcca
ctgtaccacactgtgctgattggaggcgacacctcctgttgtgagaccctcctgtaccac
agagccaagctggggctccgtgatgagaatggctgggacgagacccatcaggcttgtcaa
aatggaaactcacaacacttagagcacctgcttttttatggtgcggactcttcttcccag
aatgcctcaggaaacactgccctgcacatatgtgctttatataataaggagagctgtgct
cgcattctgctgtatcgaggagccagtaaggacacaaagaacaacagtgggcagaccccc
ttccaggtggctgtgatgtctggccattttgagctgggagaaatcattaagaaccatcgt
gaatcagacgtagttccctttctggagtctccaaagtacgccccccagaggagggagagt
ggccgaactcttggattgccccatcctcacccattcttgcgggccaacagtgataacagc
atgaatgtaccagactggattgcctttcccaacgcacctggatcaaacattgtatctgtg
cagggtcagaagcacggcggcaccttgcgcagctccagcagtccccgcggtgcccgaacc
cgttccccgtcccggggccgaacaggagacagagatgaacgaagcagacagccacgtggc
aggcaaggggcgggctccatcagtagtcagggcacagtgagcgggcagcggcgacgtctc
tatagcgccgtacctgggcgcgtgtttgtggccacccgctcgcactctgcccagggggac
cgtgagatcagccttaacaagggagacaaagtcaaagtgctgagtgtaggtgaaggaggc
tactgggaggggacggttcgagggcgcaccggctggttcccttctgactgcgtagaggag
gttgcacttcgcagcctggacaatcgatcggagagccgcagtgagcgagccaagcgactc
tttcggcattacaccgttggatcttacgacagctttgatgcgcccagtgactacataatc
aaggagaaaacggtcctcctgcagaaaaaagacaatgaggggtttggctttgtgctgaga
ggagccaaggctcagacccctattgaagagtttactcccaccccagcctttccggcactg
cagtaccttgagtctgtcgacgagggaggcgtggcttggagagctggtctacgaatggga
gacttccttattgaggtgaatggccagaatgtggttaaggtgggacacaggcaggtggtc
aacatgatcagacaaggcggcaacagcctcatggtcaaggttgtcatggttacccggaat
cctgatttggaggaaggggtcagaaagaaaattccacagcagagcaagagactgagcaca
ccggctatcgccctgcgctccaaatccatgacatcagaactggaagagatggtggacaga
gcctctgctccatggaaaaagaaatcagagttcgagtcttcacaagctacagagaagaaa
aggactgtttatcagatggctttgaataaactggatgagattttagctgcagcacagcag
accatcagtaccaatgaggctccaggtccccgtgttcaggggataaaaagagaacggggc
agaggcttttataatgagccaagttttgaccagtccggaatgggaatgactacatctggg
gcagggctaggctacgaccgtggtcagtttgtgcctggccacggccccccgcacggtatg
ctgcgacagaagtccatcggggttccagaggaggagaagcagcaccttcatcctccagcc
atgaagtttgcacgaagtctttcagtgcccggcccagatgatatccctcctccacctact
acagctccccctgagcccccattctcctcagcaccccctcttggctttcggggcaagaca
ccccaacaaccttctgtttctgtgtcccaatccacttcctcttctgcacattatcagctc
tactcgcagtcaatacacgtcgcccatggagccagagataggtcccctggaccaccaact
ggatctggaacaggggaccaacctcttccttactctcatgctcaagctcacccgtctgtg
cctagcagaactgcttccaggaaggtgattgggtacacaggggaccttgcaggagctgga
ggaggaccaggggccaaggcagcagcattgagaaggggctacagcaatgcagtgccaccc
agcagtgtcgctacagtaattccccagcagcagcagactactcaaagccaaccctccagg
ttggaccgcagtgcagttgggacagggggtgtaccaaaaggtggtggacggagagggaag
ggacccttggtaaagcaatcaaaagtggaggatctgcgtggaggccagggtacgctggaa
ggaaaggggtcagtggagaagagctccattcctattcccaccatcattgttaaagctcca
tctaccagcagtagtggtcgcagtagccaaggcagcagtgtggaggctgaaccacctccc
ccagaagaaagtgacagttcaaaaccccaaccagttgttcccccacctgcacctactgtt
ccaccaccagcccctccctctatgcctgctcctccacctccatcagcgtcatcacttcgt
actcaagagagtttggactataccagccagtttggtgctgccatagtaggggcagctcgc
agggaccgtgaacgatttcatgaagcacgaaggaagagtgcctcattttttctctctgct
gaggaagagttaggtggagtaggaggagtcataggacgaacccagacgtcccaacagcag
ctaagcactcagccttcacctcgcctgcgaccatccaaatctatagatgagggcatgttc
tcaggtgatacctttatccaccacacacgcagtatgcctcctgcatttggcttgcctgag
tactcctcacctgctcctcctggggactaccagcccaagtctgtacctgctgacttctat
ggagcaggaggccgacaacagcagcagcagcaaccttccaccacaacttttattcacccg
ctaacagggaaagttctagacccttcatccccactaggcttagcgttagcggcacgtgaa
cgtgccttgaaagatgacggacgcatacgtcgggaaaggaccccagaacatcactttagc
cggcagctgtccagcattggagcctttccctcatccactgcgcaacccacttcacatctc
tcctactccatgacctcgtcttcctctgccatctcctctgctgcccagtccgccagctcc
tcatcataccttgttacctcatcctcactagctgctaccaccacatctactcggcctcca
tcacccagaatcctgcgtggagcagggagcagttggggtgaggaaacaagggtgggagat
cgtgcggaaagggaggccgctggtgcctctgctcccagagaaggtctaagggttcgattc
tctgaagataaaaccgtccacacacaccactaccaatctcagcactaccagcccacctac
aaggaacgtgacagagagcgtcagagagagagatcaagagaaagagagatggagaaagct
cagacccagttacaacagcagtcaattcagccatcgcctcggcgcccatcatttttgagg
atggagagtgaggctgggtcatacatcctttccctaacacctccatctccacctccagca
gtggcacctacacgtccttcagctggaggaggaggtggaagtggatcaggtttgatggtt
ctccctcccccagccccctcagtggatgcagatgatgagtttgtgtttgctgagcctctt
cctccaccgttagagtttgccaacagttttgatcgtggtttgggttaccatagtatgatg
tataacaatctgtcagcccgtcaacagcttcaccaacctcctcccccacctcccccgcca
cctcctccacctccaaaagactcctttatggcagggttcccccttcacacgcctctgcct
tcaccccaggcaggggattccacaacttcaagtctaacttcctatgacagtgaggttgcc
aacctgacccagtctgccccatctccttcaccatcatacccgaatcctctcccacctccg
tctccctccacgttgcaacctgctgcacctcctccacctccctctgtatcacctccaccc
ccacccacatcctaccacagaccatttggtctatcccaatcacaacatctgtataacaat
acacatccgccagagcgttcctcttctccaacgccacctccccattctatcccagctcca
cctgcctaccgggggcccccagtatccacgcctgcaacctctgtctcactaagaggctcc
tcaactgtgaccgcaagctgttcctcaactgcttctacttcaactgtttccgctatcgct
actacggctgccattgtcaccccgcacacacgcatggcaaccgtctccacagtagctaca
ggaagtagcaggcggcccagtgcagagcatcatccaccgcccagtgcagctgcagccatg
accagtgagtcccaggagacagtagtggattctggcattgaagagttggacagccgaagc
agcagtgaccatcacttagacagtattctagcactcagtgggagtggggtcagagagagg
ttggagagagcagggttggggagcttaggtggaagtggaggcacaacagagtctgacaga
acgagtggcgcagactttttagaatcctacatgagctaccttgatggacagacttttgaa
atgcacaatgccaaagccaccagcactgcatccacctacccgaaaacacagaggtacaga
gaaggcagccgggccggagatctacgacggcaaaccagcacagcaccccctgcataccac
agacgtagggaggaggaagaggaggaggatgaggcacaagaggcagaggaggagtacatt
aatgcccgagatggctatgggatgggggaagggccagggatcgctcgctcctctgtaatg
tactttgatcgaccccgcactccagagatgaaacctctttggggtgaagggtcgaccggg
gctgcacagtctgtgggagagggagcaggccaggctggagggacttacatggaagcacgt
aagctgcatcctcccatgtccagtatgaaggcgagcatcatcaatgagctaagctccaaa
ttacatcagaggagcaaaggaacagagagctggggagctcagaggtcactgagcagacat
aggttctcggaggactccacaggtgcgttgagtcctccctctgtccgctcttcctcgcca
tctcctgttcaactctctcagcctgccttgtctccctcccccaccccttcctcccagcca
atctacccgaactgggctcgatctccttcccctcagccccctgctaactcatcccagcct
cctccccgatcccactcacccgtttctccctcttcgtattcgccataccccacctcaccc
aaacatcgtcccgtgtaccgcaccaaagccctagagttccagtttatccccagccgcgag
tcccgtaaagctgagtcccatcacgctcaacgcagacgtgcacccagccccctaatttct
ccttctgaccgtcccaagcttggccctccccgtccctcatcgcttcccattctccccacc
actcctctctatagcagcctttatgatcttcgtggttccgtcactccaccctcacctgca
aatcccctcggggacccctacttctccccgtctcctcctctctttgccacctcaggtgct
ccgccgccaccaaattcctctctggttgtctctcgctccctttccccgacccacttcctg
tcagggacttcctccccgcctctccatcacattcctccacccacttgcctgagttacccc
cacctccctcccccttcacccaccaagccctttgcctctaaaccactcccatactggacc
aagtacgatgtggctgattggctgggttatctgaacttgggtgagcacagggagcgtttt
ctggacaatgagattgatggcacacacctgccctctcttaccaaggaggactacctggac
ctgggtgtgaccagggttggccatcgcatgaacatagagagagcactgaggagagtgatg
gacaggctgtcttctagccctttccccattcccgccctctcccctcgagatgaacggaca
gacagaaggagagatgaggccaaccggagctga
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integrated database retrieval system
